Nonomuraea fuscirosea: OIE67_18590
Help
Entry
OIE67_18590 CDS
T09742
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OIE67_18590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfs03000
]
OIE67_18590
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_18590
Enzymes [BR:
nfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OIE67_18590
Transcription factors [BR:
nfs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OIE67_18590
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OIE67_18590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WSA56540
LinkDB
All DBs
Position
complement(4108209..4109426)
Genome browser
AA seq
405 aa
AA seq
DB search
MAKPRPRRGAGMVVDREGVAGLAARLGYSPRQVHRQLVAEVGAGPQALARTRRAQTARML
LESGPLPISDVAFAAGFASIRQFNDTIRQVYATTPSRLRGAGNGAQPPGVTTVRLAYRPP
MDVPALLACLGARAVPGIEHYDGDAYSRSLSLPHGAGVITLLPGAGHVVCALRLEDLRDL
AAAVQRCRRLLDLDADQQAIDAFLGADPALGPLVAARPGLRVPGCADPGELAIRTVLSHR
TRAATVRDLLAGLVSTYGRPLTTPFGAITHMFPDMSALADTASAGRTGRELARALADGTL
RLDTGCDPAQAREQLRDIPGMSRWAIACIQMRLLGDPDVLLPGLPVRRAVHRLAADPGRW
RPWRSYAMRHLALIPDTSGIRPHAMSAARPRPRHHPLVTRGAVRS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagccccggccacgcaggggcgcggggatggtcgtcgaccgcgaaggcgtcgcc
gggctggccgcccgcctcggctacagcccgcgccaggtgcaccgtcagctcgtcgccgag
gtcggcgccggaccccaggccctggccaggacgcgacgggcgcagaccgcgcggatgttg
ctggagtccggcccgctgccgatcagcgacgtggccttcgccgccgggttcgccagcatc
aggcagttcaacgacaccatcaggcaggtgtacgcgacgacgccgagccggttgcgcggc
gccgggaacggtgcccagccgccgggggtcaccacggtgcggctcgcctaccggccgccc
atggacgtgcccgcactgctggcctgcctgggcgcgcgggccgttcccggcatcgagcac
tatgacggcgacgcctacagcaggtcgctgtcgctgccgcacggcgcgggcgtgatcacg
ttgctgcccggggccgggcacgtggtctgcgctctgcggctggaggacctcagagacctc
gccgccgcggtgcagcgctgccggcggctgctcgacctggatgccgaccagcaggccatc
gacgccttcctcggcgcggacccggcgctgggaccgctggtcgcggcccgccccggcctc
cgggttccgggctgcgccgaccccggagaactggcgatccggacggtgctcagccaccgg
acgcgagccgcgacggtacgcgacctgctcgccggcctggtcagcacgtacgggagaccg
ctcaccacccccttcggcgcgataacccatatgttccccgacatgtcggccttggccgat
accgcgtccgcaggccgtaccgggcgggaattggcccgcgcgctggccgacggaacactc
aggctggacaccggctgcgaccccgcccaggcacgcgagcaactgcgcgacatccccggg
atgagccggtgggcgatcgcctgcatccagatgaggctcctcggcgatcccgacgtcctc
ctccccggcctgccggtacggcgagccgtgcaccgcctggcggccgatcccggccggtgg
cgcccttggcgctcatacgccatgcggcacctggccctcatacccgacacctccgggatc
cggccccacgccatgtctgccgcacgaccacgtccgcggcaccacccgctcgtaacccgc
ggcgccgtccgttcgtag
DBGET
integrated database retrieval system
