Nonomuraea fuscirosea: OIE67_25275
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Entry
OIE67_25275 CDS
T09742
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OIE67_25275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_25275
Enzymes [BR:
nfs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OIE67_25275
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OIE67_25275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
OB_YrrC
AAA_11
Viral_helicase1
HHH_5
AAA_22
PIF1
NAT10_TcmA_helicase
nSTAND1
AAA_16
TraI_hel_assoc_N
NPHP3_N
SLFN-g3_helicase
NACHT
ABC_tran
AAA
HTH_IclR
RsgA_GTPase
nSTAND3
MeaB
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
WSA57810
LinkDB
All DBs
Position
5531564..5533696
Genome browser
AA seq
710 aa
AA seq
DB search
MEASVEQLVYVRDDEYTVARMSADGEPDFVATGRALAGVQPGETLRLFGDWSRHARFGRR
FAVTGCERVTPSSVRAIRIYLGSGLIRGIGPRLAYAIVDHFGEATLKVIDGEPERLTEVV
NIGPLRQGQIVEAWQEQKAIAALMVTLQGLGVSPLLAAKIYQVFGQDADEVLTTDPYRLI
GRVRGVAFRVADRIALQAGVPERSPQRVKAALLDRLEAAGSRDGHCFVPVATLVREAAEL
IEQDQELVRPMVDALAAERRLVVEAAPDQPGQVVAYLKHVHSREVALTAQLTALMEARST
LPLRSYREDPGLHEDQRAALTMALTSTVSIITGGPGCGKSHTVKSIATTVRAAGGTVTLT
APTGKAAKRLSELTGLPAMTVHRMLAQQPDPDPETLFDELPAQADLIVVDEASMLDLHLA
TRLTAAVRPGSHLLLIGDSDQLPSIGPGDVLADLLRVPALPRVQLTHVFRQAGGSGIIDA
AHRIRAGRLPSTPGGGGFWFEELDDPEQVARRVAHLAMVAIPRKQNVDPGQVQVLCPMRK
GDTGATALGRLIQDQLNPAADDKPEHWSGSSVFRVGDRVMPIRNNYDKGVFNGETATVTA
VVREERVVELRTDDGESVSYSFDELDDLTHAYAISVHRSQGSEYPFVVAPIVAESGGVML
RRKLLYTLVTRAKAWVVLVGQREALELAVHRLGHRRNTGLARRLASALDA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtggaggcgtccgtcgagcagctcgtctacgtccgtgatgacgaatacaccgtcgcgcgc
atgagcgccgacggcgagcccgacttcgtggccaccgggcgggcgctggccggggtgcag
ccgggcgagacgctgcggctgttcggcgactggagcaggcacgcgcggttcgggcggcgg
ttcgcggtcaccgggtgcgagcgggtgacgccgtcgtcggtccgggccatccgcatctac
ctgggctcggggctgatcaggggcatcgggccgaggctggcgtacgcgatcgtcgaccat
ttcggcgaggccacgctcaaggtcatcgacggcgagcccgagcggctcaccgaggtggtc
aacatcgggccgctgcggcaggggcagatcgtcgaggcgtggcaggagcagaaggccatc
gccgcgctgatggtgacgttgcaggggctcggcgtcagcccgctgctcgcggccaagatc
taccaggtcttcgggcaggacgccgacgaggtcctgaccaccgacccctaccggctcatc
gggcgggtcaggggcgtcgccttccgggtcgccgaccggatcgccctgcaggccggggtg
cccgagcgcagcccgcagcgggtcaaggcggcgctgctcgaccggctggaggcggccggc
agccgcgacggccactgcttcgtcccggtcgccacgctggtcagggaggcggccgagctg
atcgagcaggaccaggagctggtgcggccgatggtcgacgcgctggcggccgagcggcgg
ctggtcgtggaggcggccccggaccagcccggccaggtggtggcgtacctgaaacacgtg
cacagccgggaggtggcgctcaccgcccagctcaccgcgctcatggaggcccgctcgacg
ctgccgctgcgctcctaccgcgaggacccgggcctgcacgaggaccagcgggccgccctc
accatggccctgaccagcaccgtctcgatcatcaccggcggtcctggctgcggcaagagc
cacacggtcaagtccatcgcgaccaccgtgcgcgcggcgggcggcacggtgacgctcacc
gcccccacgggcaaggccgccaagcggctgtcggagctgaccgggctgcccgcgatgacc
gtgcaccgcatgctcgcccagcagcccgaccccgaccccgagacgctcttcgacgagctg
cccgcgcaggccgacctgatcgtggtcgacgaggcgtccatgctcgacctgcacctcgcc
acccggctgaccgccgccgtccggcccggcagccatctgctcctcatcggcgacagcgac
cagctgcccagcatcggccccggcgacgtcctggccgacctgctgcgggtgccggcgctg
ccccgggtccagctcacccacgtcttccggcaggcgggcggcagcggcatcatcgacgcc
gcccaccgcatcagggccggccggctgccttcgaccccgggcgggggcgggttctggttc
gaggagctcgacgaccccgagcaggtggcgcggcgggtggcacatctggcgatggtggcg
atcccgcgcaagcagaacgtcgatcccgggcaggtgcaggtgctgtgcccgatgcgcaag
ggcgacaccggcgccaccgcgctcggccggctcatccaggaccagctcaacccggccgcc
gacgacaagcccgagcactggtcgggctcctcggtgttccgggtgggcgaccgcgtcatg
ccgatccgcaacaactacgacaagggcgtcttcaacggcgagacagccacggtgacggcc
gtggtgcgcgaggagcgcgtggtcgagctccgcaccgacgacggcgagagcgtgagctac
tccttcgacgagctcgacgacctgacccacgcctacgcgatcagcgtgcaccggtcgcag
ggcagcgaatacccgttcgtggtggcgccgatcgtggccgagtccggcggcgtcatgctg
cgccgcaagctgctctacacgctggtgacgcgggccaaggcgtgggtggtgctggtgggg
cagcgcgaggcgctggagctggcggtgcaccgcctcggccaccgccgcaacaccggcctc
gcccgccgcctcgcctcggccctcgacgcctga
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