Nonomuraea fuscirosea: OIE67_40740
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Entry
OIE67_40740 CDS
T09742
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OIE67_40740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfs03000
]
OIE67_40740
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_40740
Enzymes [BR:
nfs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OIE67_40740
Transcription factors [BR:
nfs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OIE67_40740
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OIE67_40740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
WSA50340
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Position
8965541..8967061
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AA seq
506 aa
AA seq
DB search
MPPTELDFDSCYRAVSARDSRFDGRFYTAVTTTRIYCRPICPARTPASRNVRFYRHAASA
EAAGFRPCKRCRPELSPGDPGWDLRGDLIGRALRLIDDGDADEQGIAGLARRLHITERHL
HRLFVAELGVGPLAVARTKRLLLAKQLLTETALPVTEVAFAAGFGSVRQFNATMRETYGF
TPSELRATAGPRSTRSIPAPRVNAAAGERLPSPTRTSEGLPGTATEQLGTPDQALPAGSP
VTLRLRLNRREPYDVDEVFGFLASRAIPGLEVAEPTSYTRAVPGGTITLSPRPDHIALDV
AVEDTRQLARVVARCRRLLDLDADPEAISEVLGQTSLAPLVAARPGLRVPGAFDGFELAV
RAVVGQQISVAGARTLLGRIVARAAAPGGLFPAPAHLAETDLTGLGLTNRRIATLKELAT
HLTEGRIDLDGGQDPAETVAGLLEVHGIGPWTAGYIALRALRDPDAWPTGDLVLIKRMAA
LGIPHDHIERWRPWRAYAALHLWSSS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccacagagctcgacttcgactcctgttaccgggccgtctccgccagggactcc
cggttcgacggtcgtttctacaccgcggtgacgacgacccgtatctactgccgcccgatc
tgccccgcccgtacgccggcctcccgtaacgtgcgcttctaccggcacgcggcctccgcc
gaggcggccgggttccgcccgtgcaagcgctgccgccccgagctgtcgcccggcgacccc
ggctgggacctgcgcggcgacctcatcgggcgggcgctgcgcctcatcgacgacggcgac
gccgacgagcagggcatcgccgggctggccaggcggctgcacatcaccgaacgccacctg
caccggctgttcgtggccgagctgggcgtcgggcccctggcggtggcgcgcacgaagcgg
ctgctgctggccaagcagctcctgaccgagacggcgctgccggtgacggaggtggcgttc
gcggcggggttcggcagcgtacggcagttcaacgcgacgatgcgggagacgtacggcttc
acgcccagcgaactgcgcgccacggccggcccccgctcgaccagaagcatccccgcacca
cgcgtcaacgccgcggcgggtgagcgccttccctcgcccacccgcacctccgagggcctt
cctgggaccgccacggagcagctcggcaccccggatcaagccctgccggcggggtcgccc
gtcaccctccggctgcggctgaaccggcgggaaccgtacgacgtggacgaggtgttcgga
ttcctggcctcccgggcgattcccgggctggaggtggcggagccgacgtcgtacaccaga
gccgtaccaggcgggacgatcaccctcagcccacgaccggaccacatcgccctggacgtg
gccgtcgaggacaccaggcagctcgcccgcgtcgtggcccgctgccgccggctgctcgac
ctggacgccgaccccgaggcgatctcggaggtgctcggccagacctcgctcgccccgctg
gtcgcggcgcggccggggctgcgggtgccgggggcgttcgacgggttcgaactggccgtg
cgcgcggtcgtcggccagcagatctcggtggccggagcccgtacgctgctcggccgcatc
gtcgcccgcgccgccgcacccggcgggctcttccccgcccccgcccacctcgcggagacc
gacctgaccgggctcggcctgaccaaccgcaggatcgccacgctcaaggagctggccacc
cacctgaccgagggccggatcgacctcgacggcggccaggacccggcggagacggtggcc
gggctgctggaggtccacggcatcggcccgtggacggccggctacatcgcgctccgcgcg
ctgcgcgaccccgacgcgtggcccacgggcgacctggtgctgatcaagcgcatggccgcc
ctgggcatcccgcacgaccacatcgaacggtggcgcccgtggcgggcgtacgccgccctg
cacctctggagctcctcatga
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