Nonomuraea fuscirosea: OIE67_54720
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Entry
OIE67_54720 CDS
T09742
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nfs
Nonomuraea fuscirosea
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nfs03016
]
OIE67_54720
Enzymes [BR:
nfs01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
OIE67_54720
Transfer RNA biogenesis [BR:
nfs03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
OIE67_54720
Prokaryotic type
tRNA splicing ligases
OIE67_54720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WSA52949
LinkDB
All DBs
Position
11836236..11837423
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AA seq
395 aa
AA seq
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MTYNEVTGTRRPLRMWAEPETVDPQAMQQLRNVANLEWVHGVAVMPDVHHGKGATVGSVI
AMKDAVSPAAVGVDIGCGMTAVKTTYKDSQLPDNLAYLRGKLEQAVPVGFGHHKRPVDPG
NVHGMKTAGWAEFWKDFDDLAPAVHARRERAEAQMGTLGGGNHFLEVCADDEGWVWVVLH
SGSRNIGKELAEHHIGVARGLSHNQGLVDRDLAVFLGRTPEMDAYRRDLFWAQDYARRNR
SLMMGLVCDVLRRHLPNITFEQPISCHHNYVAEERYDGVDVLVTRKGAIRAGSGDLGIIP
GSMATGTYIVKGLGNSAAFNSASHGAGRKMSRNKAKKTFTVKDLQEQTAGVECRKDSGVI
DEIPGAYKDLESVMAAQTDLVQVVAHLRQLICIKG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgacgtacaacgaggtgaccggaaccaggaggccgctgcgcatgtgggcagagcccgag
acggtcgatccgcaggcgatgcagcaactgcgtaacgtggcgaacctcgagtgggtccac
ggtgtcgccgtcatgccggacgtgcaccacggcaagggcgcgacggtgggctcggtcatc
gcgatgaaggacgcggtctcgccggcggcggtcggcgtggacatcggctgcgggatgacc
gcggtgaagaccacgtacaaggactcgcagctccccgacaacctggcctacctgcgcggg
aagctggagcaggcggtgccggtcgggttcggccaccacaagcggccggtcgatccgggc
aacgtgcacgggatgaagacggccgggtgggcggagttctggaaggacttcgacgacctc
gcgccggccgtgcacgcgcggcgcgagcgcgccgaggcgcagatgggcacgctcggcggc
ggcaaccacttcctggaggtgtgcgccgacgacgagggctgggtgtgggtcgtgctgcac
tcgggctcgcgcaacatcggcaaggagctggcggagcaccacatcggggtggcccgcggc
ctctcgcacaaccagggcctggtggaccgcgacctggcggtcttcctcggccgcaccccg
gagatggacgcctaccggcgcgacctgttctgggcccaggactacgcgcggcgcaaccgt
tcgctcatgatgggcctggtctgcgacgtgctgcgccgccacctgccgaacatcacgttc
gagcagcccatctcctgccaccacaactacgtggccgaggagcggtacgacggcgtggac
gtgctcgtcaccagaaagggcgcgatccgggccggctccggcgacctgggcatcatcccg
ggctcgatggccaccggcacctacatcgtcaagggcctgggcaacagcgccgccttcaac
tccgcctcccacggggcggggcggaagatgagcaggaacaaggccaagaagacgttcacc
gtcaaggacctgcaggagcagacggcgggcgtggagtgccgcaaggactcgggggtcatc
gacgagatcccgggggcctacaaggatctggagtcggtgatggcggcccagacggacctg
gtccaggtcgtcgcccacctccgccagctcatctgcatcaagggctga
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