Nonomuraea fuscirosea: OIE67_55165
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Entry
OIE67_55165 CDS
T09742
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nfs
Nonomuraea fuscirosea
Pathway
nfs03420
Nucleotide excision repair
nfs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nfs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OIE67_55165
03430 Mismatch repair
OIE67_55165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfs03400
]
OIE67_55165
Enzymes [BR:
nfs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OIE67_55165
DNA repair and recombination proteins [BR:
nfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OIE67_55165
MMR (mismatch excision repair)
Other MMR factors
OIE67_55165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WSA53032
LinkDB
All DBs
Position
11936141..11939422
Genome browser
AA seq
1093 aa
AA seq
DB search
MLTPAELAGKLGILPPTPEQAEVIEAPLEPMVVMAGAGSGKSETMAGRVVWLVANGLVKP
ENVLGLTFTRKAAAELATRVRERLNGLAEAGLVEPGSLDTEPTVSTYHAYAARLVTDHAL
REGLEPTMRLVTPAVSWQLASRVVAMYDGPMDKIELGPPSVTAALLELAGELSEHLRSPS
DVRRVGEWLRERLDLLPGRTTLAQRKPVSVQAAREQLLPLVRAYERLKRGREVIDYGDQM
SLAARIAAGHKEVGEIERSRYSVVLLDEYQDTSHAQLVLLRSLYGGGHPVTAVGDPCQSI
YGWRGASAGNLRRFPRDFRTASGDRAPVRQLSVSFRNGDRVLDVAARVQLPLRMEAREVP
VLIPGPNRVDRGRVTCAFHETAEDEARWIADGIARILGQEVAPDGLPWGEKERKKTLAVQ
PQDVAVLARKRSQFPALRRALEDRDIPVEVVGLGGLLTVPEVNDIVATLRVLYDPTAGDA
LARLMAGPRWRIGPADLRVLGEHARELARELSDSHRESDPLDQVVADLAEERGSLVDALD
ELPDREAWLESFSPLARTRLVALAHELRQLRAHTAQPLPDLITEVERRLGLDIEVAARSG
AVGAFAARADLDAFLDAASRFAGDSEDPTLGAFLAYLQAAESEEFGLEAGRVGESNSVKL
MTVHASKGLEWPIVVVPGLSQLVSSKGTIATGSMFPATPVMNSRWTENPRKLPYALRGDA
ADLPRLGGLSKEELAAFDEHCRERDLMEERRLAYVAVTRAHYHLIASGYRWGTATKPLAP
SDFLLEIRDTADRVSFWADDLAEGATNPLLAEPAEAVWPVTPEGLRYESVLDGARLVEDA
LAGTLGDDDEDEPLKSYEEERLRAWDRDTDLLLRERELHRRRPATTVELPAKLTVSSLVT
LAADPRELARRIRRPVPVKPAPLARRGTSFHKWLETRWEQQRLIDDLELYDEELEEADVR
LAELQERFEESEWADRRPIDLEVPFETMIADRLVRGRMDAVFERPGGGYEVVDWKTGQPP
RGKAAKAATVQLAAYRLAWAHLADVPLEEVGAAFHYVRANRTVRPVDLLDADGLMALIER
VKLVDDGTRASGA
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccccggccgaactcgccggcaagctcggcatcctgccgcccacccccgagcag
gcggaggtcatcgaggccccgctggagccgatggtcgtcatggccggcgccggctcgggc
aagagcgagaccatggccgggcgcgtggtctggctggtcgccaacggcctggtcaaaccg
gaaaacgtgctgggcctgacgttcacccgcaaggccgccgccgagctggccacccgggtg
agagagcggctcaacggcctggcggaggccggtctggtcgagccgggctcgctcgacacc
gagccgaccgtgtccacctaccacgcctacgccgcccgcctggtcaccgaccacgcgctg
cgcgaagggctggagccgacgatgcgcctggtcacgccggccgtgtcgtggcagctcgcc
tcccgggtggtggcgatgtacgacggcccgatggacaagatcgagctgggcccgccgtcg
gtcacggccgccctgctggagctggccggagagctgtcggagcacctgcgctcaccgtcc
gacgtgcgccgggtgggggagtggttgcgcgaacggctcgacctgctccccggccgcacc
acgctcgcgcagcgcaagccggtgagcgtccaggcggccagggagcagctgctgccgctg
gtgcgggcgtacgagcggctcaagcgcgggcgtgaggtcatcgactacggcgaccagatg
tcgctggccgccaggatcgcggccgggcacaaggaggtcggcgagatcgagcgctcccgc
tactccgtggtcctgctcgacgaataccaggacaccagccacgcccagctcgtcctgctg
cgctcgctctacggcggcggccatcccgtcaccgccgtcggagacccgtgccagtccatc
tacggctggcgcggcgcctcggccggcaacctgcgccgcttcccgcgcgacttccgcacc
gcctccggcgaccgggccccggtccgccagctcagcgtcagcttccgcaacggcgaccgc
gtcctcgacgtcgccgcccgggtccagctcccgctgcggatggaggcgagagaggtgccg
gtcctcatccccggccccaaccgggtcgaccggggccgggtcacctgcgccttccacgag
acggccgaagacgaggccaggtggatcgccgacggcatcgccaggatcctcggccaggag
gtcgcgcccgacgggctgccgtggggcgagaaggagcgcaagaagacgctcgccgtccag
ccgcaggacgtcgcggtcctggccaggaagcgctcgcagttccccgcgctgcgcagggcg
ctggaagaccgcgacatcccggtcgaggtggtgggcctgggcggcctgctgaccgtgccc
gaggtcaacgacatcgtcgccacgctgcgcgtcctctacgacccgacggccggtgacgcg
ctggcccggctgatggccgggccccgctggcggatcggccccgccgacctgcgggtgctg
ggcgagcacgccagggagctggcccgcgagctgagcgacagccaccgcgagagcgacccg
ctcgaccaggtggtggccgacctggccgaagagcgcggcagcctggtcgacgcgctcgac
gagctgcccgacagggaggcgtggctggagtcgttctcgccgctggcccgcaccaggctg
gtggcgctcgcccacgagctgcgccagttgcgcgcgcataccgcgcagccgctgcccgac
ctgatcacggaggtcgagcgcaggctggggctcgacatcgaggtggccgcgcgcagcggc
gcggtgggggcgttcgcggcgcgggccgacctcgacgccttcctcgacgcggcctccagg
ttcgccggcgactccgaggacccgacgctgggcgccttcctcgcctacctccaggcggcc
gagagtgaggagttcgggctggaggcgggccgggtcggcgagagcaacagcgtcaagctg
atgaccgtgcacgcctcgaagggcctggagtggccgatcgtggtggtgcccggcctgtcg
cagctggtcagctcgaaggggacgatcgcgaccggcagcatgttccccgccacgccggtc
atgaacagccgctggacggagaatccgcgcaagctcccctacgccctgcgcggcgacgcc
gccgacctgccccggctgggcgggctgagcaaggaggagctggcggcgttcgacgagcac
tgccgcgagcgcgacctgatggaggagcgcaggctcgcctacgtggccgtgacccgcgcc
cactaccacctgatcgcctccggctaccgctggggcaccgcgaccaagccgctcgcgccc
tccgacttcctgctggagatccgcgacaccgccgaccgggtctcgttctgggccgacgac
ctggccgagggcgccaccaacccgctgctggccgagccggccgaggccgtctggccggtc
acgcccgaggggctgcgttacgagtccgtgctcgacggcgcccgcctggtcgaggacgcc
ctggccggcacgctgggcgacgacgacgaggacgagccgctcaagtcgtacgaggaggag
cgcctgcgcgcctgggaccgcgacaccgacctgctgctgcgtgagcgcgagctgcaccgg
cgcaggcccgcgaccacggtcgagctgccggccaagctgaccgtgtcgtcgctggtgacg
ctggcggccgatccgcgcgagctggcccgcaggatccgccggcctgtcccggtcaagccg
gcgccgctggcccggcgcggcacctcgttccacaagtggctggagacgcggtgggagcag
cagcggctcatcgacgacctggagctctacgacgaggagctcgaagaggccgatgtgcgg
ctggcggagctgcaggagcggttcgaggagagcgagtgggccgaccggcggccgatcgac
ctggaggtgccgttcgagacgatgatcgccgaccggctggtgcgcgggcggatggacgcc
gtcttcgagcggcccggcggcggttacgaggtcgtcgactggaagaccgggcagccgccg
cgcggcaaggcggccaaggccgccaccgtgcagctggcggcctaccggctggcctgggcc
cacctggcggacgtgccactggaggaggtgggggcggccttccactacgtgcgggccaac
cgcaccgttcggccggtcgatctgctcgacgccgacggtctgatggcgctgatcgagcgg
gtcaagctcgtagatgacggaacgcgggcttcgggtgcatga
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