Candidatus Nanosynbacter featherlites: FBF37_01085
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Entry
FBF37_01085 CDS
T08029
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nft
Candidatus Nanosynbacter featherlites
Pathway
nft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FBF37_01085 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nft03400
]
FBF37_01085 (xseA)
Enzymes [BR:
nft01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FBF37_01085 (xseA)
DNA repair and recombination proteins [BR:
nft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FBF37_01085 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
SF-assemblin
FeThRed_A
Motif
Other DBs
NCBI-ProteinID:
QCT42067
UniProt:
A0A4P9A2P6
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All DBs
Position
214931..216043
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AA seq
370 aa
AA seq
DB search
MVSLAVTPKFSVSEFLAVINQSLEMAFGSVQIEGEVSSFKVNHQKYVFFDLKDNEGTVNC
FMTVWQLRMPIHDGMRVVARAVPKVTDWGRFSLTVQSVQPVGEGNLRKSFELLRKKLSDE
GLFDDSRKRLLPSRPQHVAVISSTNSAGYADFMKIANERWGGVRFSVVNVMVQGETAADQ
IIRAIEKIESLAELPEVIVLIRGGGSADDLSVFNDELLVRKLASSRVPVVTGIGHEIDTT
LCDLVADVRASTPSNAAQLLLPDKQDMIRSIKHQLRGAALQTVRAIDTELELVQTARSSA
LDGWRQRVDELLGDVQSRIKLISEYDPELALSRGYAMIRGNCAVGEVIEIQTNKALMKAR
IEEYAERSND
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggtaagcctcgccgtgactcctaaatttagcgtcagtgaatttttagcggtcatcaac
cagtcgctggagatggcctttggttcagtacaaattgaaggtgaggtcagctcttttaag
gtcaatcaccaaaaatacgttttctttgacctgaaagataatgagggtacggtcaattgc
tttatgacggtgtggcagctgagaatgccaattcatgatggtatgcgagtggtggcacgg
gcagtgccgaaggttactgattggggtaggtttagtttgacggtgcaatcagtccagcca
gtgggtgaaggaaatttacgcaaaagctttgaactactgcgcaaaaaactgtcagatgag
gggctgtttgatgattctcgcaaacgattgttgccgtcgcggccgcagcatgtggcggtc
atctccagcactaattcggcgggatatgctgattttatgaaaattgctaatgagcgctgg
ggcggagttcgatttagcgtggtgaacgtgatggtgcagggcgaaacggcagcagatcag
atcatcagggcgattgagaaaatcgagagcttggcggagctaccagaggtgatagtgctg
attcgtggcggtggtagcgctgatgatttgagcgtgttcaacgacgagctgctggtgcgg
aaacttgcgtctagtcgagtgccggttgtgacagggattggtcatgaaattgatacgaca
ctgtgtgaccttgtggctgatgtgcgagcgtcaacgccaagcaatgcagcacagctattg
ctgccggataagcaagatatgattcggtcaatcaagcaccagcttcgcggtgcagcgctg
caaacagtacgggcgattgacacggaactggaactggtgcaaacggcgcgcagtagcgct
ctagacggctggcgtcagcgggttgacgagctgctgggggatgtgcagtcacgtatcaaa
ttgatcagcgaatacgacccagaattagcgctatcaagaggctatgccatgattaggggt
aattgtgcggtcggggaagtgattgaaatacaaactaacaaagctttgatgaaagcgagg
attgaagaatatgcagaacgaagcaacgattaa
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