Candidatus Nanosynbacter featherlites: FBF37_01530
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Entry
FBF37_01530 CDS
T08029
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nft
Candidatus Nanosynbacter featherlites
Brite
KEGG Orthology (KO) [BR:
nft00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nft03032
]
FBF37_01530 (topA)
03400 DNA repair and recombination proteins [BR:
nft03400
]
FBF37_01530 (topA)
Enzymes [BR:
nft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FBF37_01530 (topA)
DNA replication proteins [BR:
nft03032
]
Prokaryotic type
DNA Topoisomerases
FBF37_01530 (topA)
DNA repair and recombination proteins [BR:
nft03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FBF37_01530 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QCT42150
UniProt:
A0A4P9A2X5
LinkDB
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Position
complement(306567..309038)
Genome browser
AA seq
823 aa
AA seq
DB search
MKNLVIVESPAKAKTIEKYLGKEFHVLSSVGHIRSIVKKTKDGTPPIDVANDFFAVYEVD
PEKKKVISELKKNVKAVGKDNVWLATDEDREGEAIAWHLCKVLDLPIETTKRIVFHEITK
DAITTAIKNPRTVDMNLVQAQQARQILDRLVGFELSPVVWQKVPGGKSAGRVQSPAVRLL
VEREREIMKFAGSSQFKVTAIFIHDNQEFKAELNQKFDSEAAAHEFLNSLKPATFTVSDI
SKTPGTRNPAAPFTTSTLQQEANAKLGFSSKATMASAQRLYQDGKITYMRTDSVNLSGQA
IASATDFIKRLYGPDYSTVRKFKTKSASAQEAHEAIRPTDITRETVTSNEYDQKLYDLIR
RRTLASQMSAAKLEKTTVTICIEGADAALPEVEAVKRSSKAGASAERSRSISSGDTSEKS
TPAKNSAAYLVFEAKGEVITFDGFLRVYGGGKDEILPKLHSGDTLETHDITARQTFARPP
ARYTEGSLVKKLEDLGIGRPSTYATIIDTVQTRGYVEKGDSEGQPRDVIVLSYNGEEVSR
DVVQEKTGSTRGKLIPTPSGELIADFLTDHFTQIVDYDFTANVETEFDKIAAANLAKSAM
LNGFYTPFHKLIEQSGGIDRSKVGANREVGIDPKSGKPILARFGRFGPMLQLGATDDEDK
PRFAPLPKGAKIETVTLEQALEMFKLPRVVGQTEDGQDIKANIGRFGPYIQVGKLFVSIK
PEDPHTITLETARELYAAKLQAEAEKNIADFGDGVKVLNGRFGPYITDGTKNAKIPKDID
PKTITHEQALELLKAAPAKPARRGRTSAKSKTAAKKSTTRKKS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctcgttatcgtcgagtcaccagccaaagccaaaaccattgagaaatacttg
ggcaaggaatttcatgttctgtcaagcgtgggacatatccgctcaattgtcaaaaaaacc
aaggacggcacgccgccgattgatgtggcgaatgatttttttgccgtctacgaagttgat
cccgagaaaaagaaagtcatcagcgagctaaagaaaaacgtcaaggccgtcggtaaagac
aatgtctggctggccaccgatgaagaccgcgaaggagaggccattgcctggcatctctgt
aaagtgttggacctgccaattgagacgaccaagcgtatcgtctttcacgagatcaccaag
gacgccatcaccaccgccatcaaaaatccgcgcaccgttgatatgaatctggtgcaggcg
cagcaagcccggcaaatcctcgaccggctggtcggctttgagctcagcccagtggtctgg
caaaaagtgccaggcggcaaatcggctggccgcgttcagagcccggcagtacggctgcta
gtcgaacgcgaacgagaaatcatgaaatttgcaggcagctcgcagttcaaggtgaccgcc
atattcatccacgataatcaagaattcaaggccgagctcaaccaaaaatttgattccgaa
gcagccgctcacgaattcttgaacagcctcaagccagccacattcaccgtcagcgatatc
tcgaaaacgcctggcacgcgcaacccagccgcaccgtttacgacctcgaccttgcagcag
gaagccaacgccaagcttggcttcagttccaaagctaccatggcctcggcgcaacgactc
taccaagatggtaagatcacctacatgcgtactgactcggtcaatttgagcgggcaggcc
atcgccagcgccaccgactttatcaagcgattgtatggcccggattattcaactgtgcgc
aaattcaaaaccaaatccgcctccgcccaagaagcgcacgaagccatccgcccgaccgac
atcacccgcgaaaccgtcacctcaaacgagtacgaccaaaaactctacgacctcatccgc
cgccgtaccctggcgtctcaaatgtcagcagccaaattagagaagacgacagtgacgatt
tgtattgaaggggcggatgcggcgcttcctgaggtggaggctgtgaagcgctcgtcaaag
gcgggcgcttcagccgaacgctcgcgtagtatctccagtggagatacaagcgaaaagagt
actccagcgaagaacagcgccgcatacctcgtctttgaagcaaaaggcgaagtcatcact
tttgacggcttcttgcgtgtctatggcggcggcaaagacgaaatcttgccaaaactccac
tctggcgacacactcgaaacccacgacatcaccgcccgccaaaccttcgcccgaccacca
gcccgctataccgaaggctcactggtcaagaagcttgaagacctcggcattggccggcca
agcacctatgccaccatcatcgacaccgtacagacccgcggctacgtcgaaaaaggcgac
agtgaaggtcaaccgcgcgacgtcatcgtcctcagttacaacggcgaagaagtcagccgc
gacgtcgtccaggaaaaaactggttccactcgcggcaagctcatcccaacaccgagcggg
gaactgatcgccgactttttgaccgaccattttacgcaaatcgttgactatgatttcacc
gccaatgtcgaaactgaatttgataaaatcgctgccgctaacctggctaaaagcgccatg
ctcaatggattctacacgccatttcacaaactgattgaacaatcaggcggcatcgaccgc
agtaaagtcggcgctaaccgcgaagtcggcatcgatccaaaatctggcaagccaatcctg
gcgcgctttggccgctttggcccaatgttacagctgggcgccactgacgacgaggacaaa
ccgcgctttgcgccgctgccaaaaggcgcgaaaatcgagaccgttactctggagcaagca
ctagaaatgttcaagctgccgcgcgtcgtcggtcaaaccgaagacgggcaagacatcaag
gccaatatcggccgctttggtccatatatccaagtcggcaagctcttcgtctccatcaaa
cctgaagatccgcacaccatcaccctagaaacagctcgcgaactctacgccgccaaactt
caggccgaagccgagaaaaatatcgctgactttggtgacggcgtcaaagtccttaacggc
cgctttggtccatacatcactgacggcaccaaaaacgccaaaatccccaaagacatcgac
ccaaaaaccatcactcacgagcaggcgctagagctcctcaaagccgcacccgccaagccc
gctcgccgcggtcgcacctcagccaaatctaaaactgccgccaaaaaatccacaactcgc
aagaaaagctaa
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