Candidatus Nanosynbacter featherlites: FBF37_03010
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Entry
FBF37_03010 CDS
T08029
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nft
Candidatus Nanosynbacter featherlites
Pathway
nft03420
Nucleotide excision repair
nft03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FBF37_03010
03430 Mismatch repair
FBF37_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nft03400
]
FBF37_03010
Enzymes [BR:
nft01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FBF37_03010
DNA repair and recombination proteins [BR:
nft03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FBF37_03010
MMR (mismatch excision repair)
Other MMR factors
FBF37_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_22
ResIII
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
QCT42608
UniProt:
A0A4P9A437
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All DBs
Position
complement(580942..583041)
Genome browser
AA seq
699 aa
AA seq
DB search
MLTELNPEQLRAVKHESGPLLILAGAGSGKTKTLTHRIAYLVSQKNVWPSHILAVTFTNK
AAKEMRQRLAVLLHENPDDRRFMSWMGTFHSICVRILRMDGMALGLDKRFVIYDTDDQLS
LIKQIMKTYNMTDRDIKPRSVLSAISHAKNDMIDPEAYAASASSPVQQRIAALFQAYEKA
LRQAAALDFDDLLLKVVELFKTHPDIRQKWQQQFQHILIDEYQDTNTVQYTLIKLLVGPE
RNLSVVGDDAQSIYSFRGADYTNILNFERDFPGAVVIKLEQNYRSTGSILHLANSLIQHN
VNRTDKNLWTNSGDGAEPQLWQLYSEAEEAQVIANEIRRQLNVGRSPDDIAVLYRTNAQS
YAIERALRQNYLPYKIVGGLRFLDRAVVKDVLAYLRLLYQPSDRMSFSRIVNVPKRGIGA
VSVAKFLAWNDEQGTPIIDGLLAVNEAQGLTPRAKHSLHELGVLLSDLQKSIDEAPADVI
EKIIDQTGYGAFINDGSVQSEEKMENLGVLVAEAKAYVDVPTFLEEMALMSASDDQAQEQ
IILMTLHAAKGLEFPVVFLTGLEEGILPHSRVFDGGKSEDVEEERRLCYVGITRARQELF
ITCASSRTQFGQIAYNLPSRFLDEMGILSGGLDKPASSSFVPEPEFYSDEIGLDVGDRVR
SPQFGVGEIMEVDGLAVVVAFENDKTKKLNVEFARLEKC
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atattgacggaactgaatccagagcaactccgggcagttaagcatgaatctgggccattg
ttgattttggctggtgctggtagtggcaaaacgaagacattgacgcaccgcatagcgtat
ttggtgtcacagaagaatgtttggccaagccatattttggcagtaacgtttacgaacaag
gctgccaaagagatgaggcagcgactagctgtgttactgcacgaaaatccagacgaccgt
cggtttatgtcgtggatgggaacatttcacagcatttgtgttcgcatcttgcgcatggat
gggatggctttgggtctggacaaacgatttgtgatttatgacacagatgaccaattgagc
ttgattaaacaaattatgaaaacgtacaatatgaccgaccgtgacatcaagccgcgttcg
gtattgtccgccatctctcacgctaaaaatgacatgatagatccggaggcgtatgcggcg
tcagcatcaagccctgtgcagcagcgcatcgctgcgctatttcaggcatacgagaaggca
cttcgtcaggcggcggcccttgattttgatgacttactactgaaggttgttgaattgttc
aagacgcatcctgacattcgtcaaaaatggcagcagcaatttcagcacattctgatcgac
gagtatcaagacaccaacacggtgcaatacacgttgattaaattattggttgggccggag
cgcaatttgtcagtggttggtgatgacgcccagtcgatctacagttttcgtggcgctgac
tataccaatatcctcaattttgaacgggattttcctggggcggtagtcatcaaactggaa
caaaattatcgttcgactggctcaattttgcatttggcaaatagtctcatccaacataac
gtcaatcggactgacaaaaatctatggaccaacagtggtgatggtgcggagccgcagctg
tggcagctgtactctgaagctgaagaggctcaggtgattgccaatgagattcgtcgtcag
ttgaatgtcggacgctcaccagatgacatcgctgtgttgtatcggaccaatgcccaaagt
tacgcaattgagcgggcgctgcgccaaaactatttgccatacaaaattgtgggcggattg
cgatttttggatcgagcggtcgtcaaagatgttttggcgtatttgcggctgctctatcag
ccgagcgacaggatgagtttttcacgcattgtcaacgtgccgaaacgaggtattggcgcg
gtgagtgtggctaaatttttggcgtggaatgatgagcaagggacgcctattatcgatggg
ttattggcggtgaacgaggcgcaggggctgacgccacgtgccaagcattcactgcatgag
ctcggggtgttgctcagtgatttgcaaaagtcgattgacgaggcgccggctgacgtgatt
gaaaaaattattgaccagacagggtacggcgcattcatcaatgacggcagcgtgcaatca
gaagaaaaaatggaaaacctgggcgtcctggtggctgaggctaaagcctatgttgatgta
ccgacgtttttggaggaaatggcattgatgtctgctagcgatgatcaagcacaagagcaa
atcatcctgatgacactgcacgccgcgaagggcttggaatttccagtagtgtttctgact
ggcttggaggaagggatattaccacactcccgcgtgtttgatggcggcaagtctgaggac
gtcgaagaagaacggcggctttgctatgtcggtatcacgcgtgctcgccaagaattattc
atcacctgtgctagctccaggacgcaatttggacaaatagcgtacaatttgccgtcacga
tttttagacgagatgggtattttgagcggcggcttggacaagcctgcttcgtcgagtttt
gtccccgaacctgaattttacagtgatgaaattggtttggatgttggcgacagggtgcgc
agtccacaatttggtgttggtgagatcatggaagttgatggcttagcggtggtggtggcc
tttgaaaatgataaaaccaaaaagctcaacgttgagtttgctcgattagaaaagtgctag
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