Nothobranchius furzeri (turquoise killifish): 107372435
Help
Entry
107372435 CDS
T05163
Symbol
zfr
Name
(RefSeq) zinc finger RNA-binding protein isoform X1
KO
K13203
zinc finger RNA-binding protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107372435 (zfr)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107372435 (zfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
zf-met
zf-C2H2_jaz
zf-C2H2_2
zf-U1
DUF5745
Motif
Other DBs
NCBI-GeneID:
107372435
NCBI-ProteinID:
XP_015796165
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MIPICPVVSFTYVPSRLGEDAKIATGNYFGFTHGAAAQYSQQPAAGVAYTHPTTVASYTV
HQAPVAAHTVAAAYAPTAAAVAVARPAPVAVAAATAAAYGGYQPTHAATDYGYPQRQPEV
PPPPPPVTSQTYQESYSYVRSTASAVGYDGTKQYYQQPTATAAVAAAHPQPSVAESYYQT
APKPAYTQGVTSYTQTQQTRQVTVIKPAAPSPASSTFSIFPVTSTVQPVAAAASVVPSYS
QSPTYSTNAVTYSGPSYSEYEAAVYSAASNYYQQQQQKQAVAAAAATAAWSGNTFTKKST
FQNKQLRPKQPPKPPQIHYCDVCKISCAGPQTYKEHLEGQKHKKKEAALKVSQSSTSSSG
SGSVLARNTQNQLRCELCDVSCTGADAYAAHIRGAKHQKVVKLHTKLGKPIPSTEPSMST
QTSITAAPSKTTMATLSSSSTTSSMCLSATSSPTTSPSASYLKPVNIVSGSMAAVKNLVS
SNLSAVGSASAGKKINTPKINFVGGNKLHTTGKMEETRVEVKVDSCKPSVLSLASQDSKT
DVSESLSTSALISLQSDVQPVGHDYVEEVRNDEGKVIRFHCKLCECSFNDPNAKEMHLKG
RRHRLQYKKKVNPDLQVEVKPSIRARKIQEEKMRKQMQKEEYWRRREEEERWRMEMRRYE
EDMYWRRMEEEQHHWDERRRMPDGGYPQGPPGPPGLLGVRPNMSGLQPQGPMVRRTLVPP
RRPDSSDDRYVMNKHAIIYPSEDELQSIQKIVSITERALKLVSDIISEQDSPKEEDGEKE
PAKDRVLKGVMRVGVLAKGLLLRGDKNVNLVLLCSEKPTKSLLTCIVEHLPKQLTIVTPE
KYEVKASIPEAAIILTSLSESKMQVTITLTSPVIREDAGRDGDVTSGMVKDPADVLDRQK
CLDALAALRHAKWFQARANGLQSCVIIIRILRDLCQRVPTWSPFPGWAMELLVEKAISSA
SAPLSPGDALRRVFECISSGILLPGGPGLADPCEKKIVDTLLPMEEQQREDITSSAQFAL
RLLAFRQIHKVLGMDPLPQTNSRFNIRNSRKRRRDNSDGTDSFEGEGKKDKKDYDGF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatttgccccgttgtctccttcacctatgtgcccagccggctcggtgaagat
gccaaaatagctaccggcaattattttggatttacccatggcgcagcagctcagtacagc
cagcaacctgctgctggggttgcctacactcaccccaccacggtggccagttacaccgtc
caccaggcgcctgtagcagctcacaccgttgcagcagcttatgctccaactgcagcagca
gtagctgtggctcgacctgcgcctgttgctgttgcagcagcaaccgctgcagcttacgga
ggatatcaacccacccacgctgccacagactatggttacccacagcgtcaacctgaggtg
cccccaccaccaccaccggtcacctctcagacctaccaggaatcatactcatatgtccgc
tcgacagcatcagctgttggttatgacggtacgaagcagtactaccagcagcccactgct
acggcggctgttgctgctgcacatccacagcccagcgtggcagagtcgtactaccaaaca
gctcctaaacctgcatatacacagggagtgacatcttacacccaaacccagcagactcga
caggtgacggtgataaaaccagctgctcccagtcccgcttcatccaccttctccatcttc
ccagtgacctctacagtccagcctgtggctgcagcagcctctgttgtcccatcttactcc
cagagcccaacgtacagcaccaatgctgtcacctactctggaccctcatactctgaatat
gaagcagccgtctattcagcagcttccaactactaccagcagcagcagcagaaacaagca
gtggcagcagcagcagctacagcggcctggtcaggaaacacattcactaagaaatccacc
ttccagaataagcagcttcgacccaagcagccaccaaaaccccctcagatacactactgt
gatgtctgcaagatcagctgtgctggcccccagacttacaaggagcacctggaaggccag
aagcacaagaagaaagaagctgccctcaaagtttctcagagcagcaccagcagcagtgga
agcggaagtgtgttggcccgcaacactcagaaccaacttcgctgtgaactttgtgatgtt
tcctgcacaggtgctgatgcgtatgccgcccacatccgaggagctaagcaccaaaaggtt
gtaaagctccataccaaactgggaaagcccattccttcaactgagcccagcatgtccact
cagacctctatcacagctgctcccagcaagaccaccatggctaccctgagcagctccagc
accaccagctccatgtgtctctctgccacctcctctcccaccaccagtcccagcgcctcc
tacctgaaaccagttaatattgtcagcggcagcatggctgcagtaaagaacttggtgtct
agtaacctctctgctgtcggctctgcctctgcaggcaagaaaatcaacacacccaagata
aattttgttggtgggaataaattgcatactactgggaagatggaggagacgagagtggag
gtcaaagtagacagctgtaagccttcagtgctgtcgttggcttctcaagactccaaaact
gatgtctctgagtctttgtccacatcagctctgatttcactgcagagtgatgtccaacct
gttggacatgattatgttgaagaagttcggaacgatgaaggcaaagtcatccgttttcat
tgcaagttgtgtgaatgcagtttcaacgatcccaacgctaaagagatgcacctgaaaggg
cggaggcaccgcctgcagtacaagaaaaaggtcaaccctgacctgcaggtagaggtcaaa
cccagcatcagagctagaaagattcaagaagagaagatgaggaagcagatgcagaaagaa
gaatactggagaagaagagaagaggaggagcgttggagaatggaaatgaggcgttatgaa
gaggacatgtactggagacgtatggaagaggagcagcatcactgggatgagcggcggcgt
atgccggatggaggctatccacagggccctcctggtcctcctggtctgcttggagttcga
cccaacatgtctggtctgcagccacagggtcccatggtgagaagaactttagtgcctccc
cgtcgccctgactcttctgacgaccgatatgtcatgaacaaacatgcaatcatctacccc
tcagaagatgagctccagtccattcagaaaattgtatcaatcacagagagagccctcaaa
ctggtgtcggacatcatttcagagcaggacagccctaaggaggaagacggggagaaggaa
ccagccaaagacagagtcctgaagggagtgatgagggttggagttttggccaaaggtttg
cttctacgtggagacaagaacgtgaacctggttctactctgctctgagaaacccactaag
agcctcctcacctgcatagtggagcacctcccgaaacagctaactatagtgacaccagag
aaatatgaggtgaaggcatcgatcccggaggcagccatcattctaacatctctcagtgaa
tcaaagatgcaagtgacaatcacgctgacttcacctgtcatcagagaggacgctggccgg
gatggagatgtaacctcaggtatggtgaaagacccagcggacgtcttggacaggcaaaaa
tgccttgacgctctggctgctctgcgccacgctaagtggttccaggctagagccaatggc
ctccagtcatgtgtgatcatcatccggatcctgagagacctctgtcagcgcgtccctacg
tggtcaccttttcctggatgggccatggagctcctggttgagaaggccatcagcagtgcc
tctgctcccctcagccctggtgatgccctcagacgtgtctttgaatgtatttcctctggg
attttacttcctggtggaccaggactggcagatccttgtgagaagaaaattgtggatact
ctgttgcccatggaagagcagcagagagaggacataacctcaagtgctcagtttgctctg
aggctgctggccttccgtcagatccataaagttcttgggatggacccactgccacagacg
aactcccgcttcaacatccgcaacagccgcaaacgtcgccgtgacaacagcgatggaaca
gacagctttgagggagaaggcaaaaaagacaagaaggattatgatgggttttaa
DBGET
integrated database retrieval system
