Nothobranchius furzeri (turquoise killifish): 107372478
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Entry
107372478 CDS
T05163
Symbol
strbp
Name
(RefSeq) spermatid perinuclear RNA-binding protein
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107372478 (strbp)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107372478 (strbp)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
107372478
NCBI-ProteinID:
XP_015796203
UniProt:
A0A8C6Q409
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All DBs
Position
sgr02:49109291..49255129
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AA seq
742 aa
AA seq
DB search
MRSFRSFSNDDRHVMTKHSTIYPSSQELEAVQTLVSTVECALKHVSDWLDQSSGNIHNNF
DSQAADRPEEDDPGDEHHEDTEESSGSYRESSAGGVLCGVMRVGLVAKGLLIKGDMDLEL
VLMCRDKPTQTLLDTVCQNLPTQIQKLTEEKYEVTSSSPEAAILVQTTAEPKLTLKIALT
SPTMREDDYQEEEEEEEEEVEELENGEEEGGVEEVAEEEEEEEEEEPGKENGQVLGAAAQ
RVEAEEEEEGEVLDRHRCLLALAALRHAKWFQARVNGLKSCVIVLRILRDMCNRHPVWEP
LKGWPLELICEKAIATCNRPLGAGEALRRVIECLASGILLPGGPGLHDPCEKEPTDTLAS
MSHQQAEGITFSAQHALRLMAFGQIYKVLEMEPLPSNKPSQKYPWSDKEGLGLKRPYEDG
TMDDKDLIKKMKRNLRKVLDSKAIDSNQPMNALMRLNQIRPGLQYRLLSQSGPVHAPVFT
MSVDLDGTNYEASGSSKKTAKLHVAVKVLQAMGYPTGFDSDLDPMSSDEKSDSEGKSETS
SHSSNNPTHSSDGSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRF
VMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAANKKKKILPQTKGALAAAAA
ASAVAAQVARGRGRAALARGAFVSAAAPGYVTPGFGTPYGYSPAAAAAPAYGGLFIDNPF
YQPRTIAPFIIHLGPQDLFSDF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctttcgttcctttagtaacgatgaccgccacgtcatgacgaagcactccact
atctacccctcctcgcaggagcttgaagccgtccagactctggtgtccacagtcgagtgc
gccctcaaacatgtctctgattggctggatcagagcagcggaaacatccacaacaacttt
gatagccaagcggcagacagaccagaggaggatgaccctggagacgagcaccatgaagat
actgaagaatccagcggcagctacagggaatccagcgctgggggtgtgctttgtggagtg
atgagggtcggtctggtggccaaaggactcctgatcaaaggagacatggacctggagctg
gtgctgatgtgcagagacaaacccacacagacgctgctggacactgtctgtcaaaattta
cccacacagatccagaagctgacagaggagaaatacgaggtcacgagctcttcgcccgag
gcggccattctggttcagactacggcagagcccaaactcactctgaagattgcactcacc
tcgccaacaatgagggaggatgattatcaggaagaagaggaggaggaggaagaagaagta
gaggagcttgagaatggagaggaagaagggggggtggaagaggtggcagaggaggaagaa
gaggaagaagaggaggagccggggaaagaaaacggtcaagtgttgggtgctgctgcgcag
agagtggaggctgaggaggaggaggagggggaggtgctggatagacacagatgtctgttg
gccctggcagcgctgcgacacgccaaatggtttcaggctcgagtgaacggacttaagtcc
tgtgtaattgtcctcaggatacttagagacatgtgcaatagacaccctgtctgggaacct
ctcaaaggatggccgttggagctcatttgtgagaaggccatcgctacctgcaacagacct
ctcggggcgggagaagctctgcgccgtgtcattgagtgtctggcctcaggcatcctgctc
ccaggtggtccaggtctgcacgacccatgtgagaaagagcccacagatactctagccagc
atgagccaccagcaggctgagggcatcacctttagtgcacagcacgctctcagactcatg
gcatttggacagatctacaaggtcttagagatggagcctcttccctcaaataaaccatca
cagaaatacccctggtctgacaaagaaggtttaggtctgaagaggccgtatgaagacggg
acgatggatgacaaggacctcatcaagaagatgaagagaaatcttagaaaagtcctcgac
agtaaagccatagactccaaccagccaatgaatgccctgatgcgcctgaaccagatccga
ccagggctgcagtaccgcctgctgtctcagtcagggcccgtccacgctccagtcttcacc
atgtctgtggacctggacggaaccaattatgaagcatctgggtcctccaagaagaccgcc
aagctccacgtggccgtcaaggttctccaggcgatgggctacccgacaggcttcgactca
gatctggacccgatgagctcagatgagaagtcagacagcgaggggaagagcgagacatct
tcacactctagcaataacccaactcactcctcagacggctccaacacgctggaggtgcga
actcagggtcccatactgacagcgagcgggaagaatcccgtcatggagctcaacgagaag
cgacggggcctcaaatatgagctgatctctgagagcggcggcagccacgacaaacgcttt
gtcatggaggttgaggttgacgggcagaagtttcgtggggcaggccccaacaaaaaggta
gcaaaggccagcgccgctctagcagctctggaaaaactcttctctggtcccaacgcagcg
gcaaataagaagaagaagatcttacctcagactaaaggagctctggccgctgccgcagca
gcatcggctgtagcagcacaggtggcgagaggaagagggagagcagcactagcgagagga
gctttcgtcagtgccgctgcacctggatacgtcacaccaggctttggcacaccgtacggc
tacagccctgccgcagcagctgctcctgcatacggtggtctgttcattgacaatcctttc
taccagccgcgaaccatcgctcctttcatcatccatctgggtcctcaggatcttttctct
gacttctaa
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