Nothobranchius furzeri (turquoise killifish): 107372914
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Entry
107372914 CDS
T05163
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107372914 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107372914 (nup50)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107372914 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
107372914
NCBI-ProteinID:
XP_015796594
UniProt:
A0A1A8UJE0
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MAKRIADKELTDRNWDQEDEGEEAGTFSIASEDVLKNRAIKKAKRRNPGAEGDGGAAFRG
FKGFSAAPSAIPAPFSGFGKAGSFEGFGLTNGGSKALYTGVSSATVGLTFNGPYVPPTAD
ITTRQTNGSSPSPTQSNKEYRRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYERHLSS
IEQQHGGGEAADGGSETPPPSAALFSFSRTTSEDLAQKVSGTAPVASGITFNFGQKVDSS
VLGSLRSKSAASSFSFSSSSQTSLFGAPGPAALPPFGGTKPDEAADENGDEESEEPPKPE
VKEVKEDDAFYSKKCKLFYKKEAEFKEKGVGTLHLKNTSDGKIQMIIRADTNLGNILLNI
IVQHSMPCSRVGKNNVMVVCVPNPPVHDKNPSGPVPLLIRVKTDEDADELHKLLEERKG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaggattgcagataaggagctgactgacaggaattgggatcaggaggatgaa
ggagaagaggctgggacgttctcaatcgcaagtgaagatgtgctgaagaatcgagccatt
aagaaggccaagcgcagaaaccctggagctgagggtgacggtggagcagcctttcgtgga
tttaaaggattctctgcggctccgtcagcgataccagctcccttctcggggtttggaaag
gctggaagcttcgaaggattcggtctgaccaacgggggcagcaaggctctgtacactggg
gtctccagtgccacagtaggtctgaccttcaatgggccctatgtcccaccgactgctgac
atcaccacccgacagaccaatggctcctcccccagcccaacccagagtaacaaggagtac
cggcggcaactgacagcgctgaactgctctgtccgtgactggatcaccaaacatgtgaac
gacaaccctctgtgtgacctgaaccccatcttcagggattatgaacgccatctcagcagc
atcgagcagcaacatggaggaggagaagctgctgatggaggctcggagactcctcctcct
tcagcagctctgttctctttcagtagaaccacatcagaggacttggcccaaaaagtctct
ggcactgctccagtggcttctggcatcacgttcaattttggccagaaggttgacagctcc
gttctaggatctttaaggtccaaatcagctgcctccagcttctctttctcctcttcaagc
cagacctccctttttggagctcctggacctgctgctctgccacccttcggtgggaccaaa
cccgatgaggctgcagatgaaaatggagatgaggagtcggaagagccacccaaaccagag
gtgaaggaagtgaaggaggatgacgcattttactcaaagaagtgcaaactgttctacaag
aaggaggcggagtttaaggagaaaggagttggaacgctgcacctaaaaaacacctcagat
ggaaagatccagatgatcattcgtgcggacaccaacctgggaaacattctgctgaacatc
attgtgcaacactccatgccgtgttctcgggtcgggaagaacaatgtgatggtggtttgt
gttccaaacccacccgtccatgacaaaaaccccagtggtccagttcccctcctgatccgg
gtcaaaactgatgaagatgccgatgagctccacaaacttctggaagagagaaaaggatga
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