KEGG   Nothobranchius furzeri (turquoise killifish): 107373624
Entry
107373624         CDS       T05163                                 
Symbol
parp4
Name
(RefSeq) poly [ADP-ribose] polymerase 4
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410  Base excision repair
nfu04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107373624 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    107373624 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107373624 (parp4)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107373624 (parp4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 BRCT_2 VWA VWA_2 BRCT PARP_reg VWA_CoxE TniB TCL1_MTCP1
Other DBs
NCBI-GeneID: 107373624
NCBI-ProteinID: XP_015797245
LinkDB
Position
Unknown
AA seq 1673 aa
MGVFDNCSVLLELKSLAFKEKKKLNAIVTENGGRICFIINKQCSLVVTSDVANLSSNRLR
SIQKHRTPVVEPDYLHRCVERGVLLPVDPYQLEPSSAPPPPLGQAHRGSTSAHPPLHQAW
SPNCRVSPEPAEETDPEKLRIYSESDPDLPAFPDNFQVAKYSIFAKTNNRTWCVLELQSV
GTESGRRYRVVRYWKDDVTAEEVAVKDQLVFLSSSEEALDVYEALMDQLDSTEMERMTGV
PPEVQHIGSAPLQQLLLEEKLSTGSLSQEVAVFVETLWTEALGSLSEVLSVPINKLSLND
VSRAEGLLIHLQKILKEENEVEVLSLLEEVFVLLPHLHRPETPPTRSFLSQKLDLCQMIR
DVLNVSEMILRSPEPSSVGKYRALRCSIQVVPPNGAEFQSVSGLLDGPIQIHQVLSVSRG
VELQTFRADLGTVKPLLHSSSPSNFVGILSRGLLLPRVAVEHHGIERTDVGNLGSGIYFS
NSLSTILKYSKPGQTDQSRLLLVCDVALGRCKEVRKKDPTLDQAPEGHHSVHGVRRTNSI
QSDFEDDEFVVYSPDQVKIKYVVQFSVEGDGLKDFQPAVSMSAVTSQSETDQELLLVDED
MDNIKNPLEDVTAGLLDSSGQQLPLQAVHVKCKLMDLLSQVIIFQKYTNLSSFPIEAKYV
FPLDDSAAVCGFEAFINGKHVVGQVKEKETARREYKQAIERGHGAFLMDQDAPDVFTISV
GNLPPGATVLIKVTFVSELVVKDGNILFSLPGSVAPWQESAALNQTTQVSVQKVCVTDEV
ADKREFTLEMSVEMPHEISSLVCITHQIQMKRTACKAVVRVLPDQVLGPEGFQLSISLSE
THLPRMWVEKHPDKDSQACMLVFYPDFNPISHSEAGEVVLLLDTSESMRGESLRLAQQIA
LQVLRKLQNSTRINVILFGTDHTEALLRTRKLAEVHLTAQSFIKHCSLVGGSTELWRPLR
ALSLLPPSRGVRNLLLLSDGHIQNAAFTLQLLKDNVQHSRLFTCGLSSTANRHMLRALAQ
AGGGAYEYFDTKTKHNWPEKVLRQVDRMSSPGCSSASVKWQQFNPAAPPPVQAPKQLHAL
FSDCCTLVYGLVPHCTQATLFGNLHGQELKTVVSTTELQMTRGTFLHKLTARALIRDYED
GSLDTNEAQHEEKKAELKSFIIELSREWSILSQFTSFVAVEERDSEQAEDGITDVNKLIA
EEDVDFLPYIGWAISQQDDDILVSNYYLSLDLKPTDSSFDWESPTPTGEGYEADFFEPDR
LCLMEPELHCLPSAVGAEAASAALGLRFKRSGPDSPSPPAPGIHLNSADFSGSSEFLFKR
LTPSYSSSAPSFSFGSTAAPPPPFAAQSSQPAPLPPVLLSTAGPPPPFAAQSSQPAPPLP
PVLRSTAAPSPPPAAPLSAMFESLDAPPSISLRALALPDSPQPEFDPPRGHSGFSGSPST
ISLNSGIRSKLTRTRRRDVALYLDEDEEPLHSMEMEQNMCARRKRDHRCSYLLRPHVSRR
LPLKSAEALPEEPQHKWTKIFQLQSLDGYWDLSPGLGALINLNVDVFANVFLKNKGICSL
GMKAHADILRMVATLLVLQLLRLEELDEGKLLQSLFRLKELPQFRPERWEQMKKAVDWVC
WADQQYPCICSRLELGLSWESSTRQLLGFDSIPPFSPLIGLDLQMTTSAVPVY
NT seq 5022 nt   +upstreamnt  +downstreamnt
atgggggtgtttgacaactgctctgtgcttctggagctcaaaagtctggcctttaaagag
aagaagaagctgaacgccattgtgacggagaatggtggacgcatctgtttcatcatcaac
aaacagtgctctctagtggtgaccagcgacgtcgccaacctgagctccaaccggcttcgc
agtatccagaagcaccgcacacctgtggtggagccagattatctgcaccgctgtgtggag
agaggagttctgcttcctgtggacccataccagctggagccttcatcagctcctcctcct
cctctgggacaagctcatcgagggtctacatcagctcatcctcctcttcaccaagcctgg
agtccaaactgccgagtctcaccagaaccagcagaagagacggatccggaaaagctcagg
atttactctgaatcggaccctgatctcccagctttcccagataatttccaggtggcaaaa
tattccatttttgccaagacgaacaacagaacctggtgtgtgttggagctgcagagcgtt
ggaactgagtcgggtcggcgttatcgtgtggtccgatactggaaggacgatgtgactgca
gaggaggtggcggtgaaggaccagctggtcttcctgtcctcctcagaggaagctctggat
gtttacgaggctttgatggaccagctggactctactgaaatggagaggatgaccggtgtc
cctccagaggtgcagcacataggctccgcccccctgcagcagctgctactggaggagaag
ctgagtacaggaagtctgtcccaggaagtagccgtgtttgtggaaaccctgtggaccgaa
gctctgggttccctcagtgaggttctgagtgttcccatcaacaagctaagcctaaacgat
gttagcagagccgagggcttgttgatccatcttcagaagatcctaaaggaggagaacgaa
gtggaggtgttgtctctcctggaggaggtttttgtcttgctccctcacctacatcgcccc
gagactcctcccaccaggtccttcctctcccagaagctggacctctgtcagatgatccga
gatgttctgaacgtgagtgagatgatcctgaggagtccagagccgtcaagcgtggggaag
taccgcgccctccgctgcagcatccaggtggtcccccccaacggcgccgagttccagagc
gtttccggtctgctggacggtcccatccagatccatcaggtgttgagtgtcagcagaggg
gtggagcttcagacctttagagctgacctggggaccgttaagcccctcctccactcgtcc
agtcccagtaactttgtgggaatcctctcccggggcctcctgcttcctcgtgttgcagtg
gagcatcatgggattgagcggacagacgtcggtaacctcggctctgggatctacttcagc
aactctttgagtaccattctgaagtactccaaacccggacaaacggaccagtctcggctt
ctgctggtgtgtgatgtggctctgggacggtgcaaggaggtccgtaagaaggacccaact
ctggaccaggctcctgagggccaccacagtgtgcacggggtccgccgcaccaacagcatc
cagtcagactttgaggacgatgagtttgtcgtctactcgccagatcaggtgaagatcaag
tatgtggttcagttcagtgttgaaggagatgggctgaaggactttcaacctgcagtcagc
atgtctgctgtgacgtctcagtcagagacagaccaagagctgcttttagtggacgaagac
atggacaacattaaaaaccctctggaggacgtgacagctggactcctggacagttcagga
cagcagctccccctgcaggccgtccatgtgaagtgtaaactgatggatctgctctctcag
gtgatcattttccagaaatacaccaatctgagctcgtttcctattgaggcgaaatacgtg
ttcccgctggacgattctgctgccgtgtgtgggtttgaagctttcatcaatgggaaacat
gtggtgggacaggtgaaggagaaagaaactgctcgtagggaatataaacaggcaatagag
cgaggtcatggggcgttcctgatggaccaggatgctcctgatgtgttcaccatcagtgtg
ggcaacctaccgcctggagccaccgtcctcatcaaagtcacctttgtgtctgagctggtg
gtcaaagatgggaacatcctgttttccctgccaggaagcgtggctccatggcaggaaagc
gccgccctcaaccaaaccacacaagtgtctgtgcagaaggtgtgtgtgacggatgaagta
gcagataaaagggagttcacgttggagatgtccgttgagatgccccacgagatctccagt
ctggtctgcattacccaccagatccagatgaaaaggactgcctgtaaggcagtggtcagg
gttctgccggatcaggtcctgggtccagaaggtttccagctgtcaatcagtctgtcggag
actcacctacccaggatgtgggtggagaaacaccctgacaaggacagccaggcctgcatg
ctggttttctacccggactttaatcccatctcccattctgaagccggcgaagtcgtcctg
ttgttggacacgtctgagtccatgaggggggagtctcttcgcctggcccagcagatcgcc
cttcaggttctccggaaactccagaacagcaccagaatcaacgtgattttgtttggaaca
gatcacactgaagctttgctgagaactcggaagctggctgaagttcatctgacagcccag
agcttcatcaagcactgctccctagtagggggcagcaccgagctgtggcggccactccgg
gccctcagcctgctgccgccgtcccgcggtgtccgaaacctgctgctgctctctgacggc
cacatccagaatgccgctttcaccctgcagctgctcaaggacaacgttcagcacagccgc
ctcttcacctgtggcctgagctcgacagccaatcgccatatgctgagagctttggctcag
gcagggggcggagcttatgaatactttgacacaaaaactaaacacaactggcctgagaag
gtgttacgtcaggtggatcgtatgtcatctcccggctgcagctcggcctctgtgaagtgg
cagcagttcaacccggcagctcctcctcctgttcaagccccgaagcagctgcatgctctc
ttcagtgactgctgcactctggtgtacggcttggtgccacactgcactcaggcgactctt
tttgggaaccttcatggtcaggagctgaaaactgtggtgtccaccacggagctgcagatg
accagaggaacgttccttcacaagctgacagcacgggcgttgattcgggactacgaagac
gggagtcttgatacgaacgaagctcaacacgaggagaagaaagcagagctgaagtccttc
atcattgagctgagtagagaatggtccatcctgtctcagttcaccagctttgtggccgtc
gaggagagggactccgagcaagctgaagacggcatcaccgatgtcaacaagctgattgca
gaggaagatgtggacttcctgccatacattggctgggccatcagtcagcaggacgatgac
atcctggtgtccaactactatctgtcactggatttaaaacctacagattccagttttgac
tgggagtctcccactcctacaggagaaggttatgaagccgacttctttgaacctgatcgt
ctgtgtctcatggaaccagagcttcactgccttccctcagctgttggtgctgaagcagca
tctgcagctcttggtctccgcttcaaacgttctggtccagactctccaagcccacctgct
cctggcatccatctgaactctgctgatttttctggaagttcggagttcctctttaaacgt
ctcactccttcatacagctcgtctgcaccatctttcagttttggatccactgctgctcct
cctcctccttttgctgctcaatcatcccagcctgctcctcttcctcctgtgttactatcc
actgcgggccctcctcccccttttgctgctcaatcatcccagcctgctcctcctcttcct
cctgtgttacgatccactgctgctccttctcctcctcctgctgctccattatctgctatg
tttgaatcccttgatgctcctccttctatttcgctccgtgctctggctcttcctgattcg
ccacagccagagtttgacccccccaggggtcattctggtttctccggctcaccttctacc
atctccctgaactcagggattcgttcaaaactcacacggacaaggagaagggacgttgct
ttgtacctagacgaagacgaggaaccgttacattccatggagatggaacaaaacatgtgt
gctcggcgtaaaagagaccatagatgttcatatttgcttcgaccacatgtctctagacgc
ctgcctttaaaatctgcagaggcactgccagaagaaccacagcataagtggactaagatc
tttcagctgcagagtttggatggatactgggacctgagcccaggactgggagctttaata
aacctcaatgtggacgtctttgctaacgtgttcctgaagaacaaaggcatctgttctctg
ggcatgaaggcccatgctgacatcctgaggatggtggccactctcctggttctgcagctg
ctgaggttggaggagctggacgaaggaaaactgctgcagagtctgtttcgcttgaaggag
ttgccacagttcaggcccgagcgctgggagcagatgaagaaggctgtggactgggtctgt
tgggctgaccagcagtatccgtgtatctgcagccggctggagctgggtctgagctgggag
tcctccacccgtcagctactgggcttcgacagcatcccaccgttctctcctctgattggt
ctggacctgcagatgaccacctctgctgtaccggtctactga

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