Nothobranchius furzeri (turquoise killifish): 107373699
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Entry
107373699 CDS
T05163
Symbol
smg7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107373699 (smg7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107373699 (smg7)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
107373699 (smg7)
mRNA cycle factors
Common to processing body (P body) and stress granule
107373699 (smg7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
107373699
NCBI-ProteinID:
XP_015797330
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MNLCAQYLRQAEALKADMTDSKLEAAEVWTSRQALQDLYQEMLVTDLEYALDKKVEQDLW
NHAFKNQITTLQSQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFSVDLPCRV
KSSQLGIISNKQSGGGTIITPQPSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQL
VPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALDSRDEVK
TKWSVSDFIRAFIKFHGHVYLSKGLDKLDVLRDKLEEQFQRLILQKAFSSQQLVHITVIN
LFELHHLRDLTGDGREQTYSSEQQIIWFQLLGLFVSFLGVMFSWVLLNKNRGEDTMGECP
LPAIKLSLDWLKLRPSVFQESAVEKRKYIWPWLVSILNSFQPREEDMSFSSVMPLPEEFE
LQGFLALRPALRSLDFAKGHQGILVDRDGLPISARHQRLIGLGRWMCENQPGLIRYRVSE
DGLLIFITDIPEEAIEEPQDKEVPVLQESSNGEQTPNDGGNTGLKSVLSTGKTQSSWPDS
GERPIVTFKENIKPREQSHDLTRSHLQKDSCKERREFSKGAGASAGKGELKKDGKRKSEV
KAQPELRKTPVTQTQTTSSSQFIPIHHPGAFPPLPSRPGFPPSAYMIPSPVAFPGLQVNP
GFTFSTGPFLQSAVHTQTGGQVQAGKQSHIPYSQQRPSGQGPGPGPMNQVPTQSPTKPVQ
QVGMGKSPPHPSGLPQYMQDQPAQMWNQAQVALQKMSPMQMSMKPPQQPPQLQQNFYMSP
QDPLKLYENQLQSQVSNMDKKMKYPDVKVQDFYRQSPYRVGDSLAIMSERMKRPLEHEVP
AGPRGPIFEQDNKTSPLLPPDLLKTLADLEEDEELAFAKPPDFFQALAAPLSSAPGPNIF
LPNQTRMESDPEVVSQLSSILPMTSFPMQEYTQNSIFSQAYGKNLALSSKPDAPIMQQET
SLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHGPVPFSNFGPIGTP
DSRDRRMVDRWKAEKPGTFGLDYLQASAPSTGSDTSWHQASSTGSWTNPESPMEESSSTV
LLDSLKSIWSSSMMQPGPSALEQLLLQQKQKQQRGHGAMNPPH
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgaacctctgcgcccagtacctgcgacaggcagaggccctgaaggctgacatgacggac
tctaagctggaagcggccgaggtgtggacgtcccgtcaggccctgcaggacctgtaccag
gagatgctggttacggatctggagtacgccttggacaagaaggtggagcaggacctgtgg
aaccatgcctttaagaaccagatcaccacgctgcagagccaggccaagaaccgagccaac
ccgaaccgcagcgaggtccaggccaacctgtccctgttcttggaggccgctagtggattc
tacactcagttgctccaggagctctgcaccgtcttcagcgtggaccttccctgtcgggtc
aagtcgtctcagctcggcatcatcagcaacaagcagagcggtggcggcaccatcatcaca
cctcagcccagttcctgttcctacatctgtcagcactgcctggtccatctgggagacatc
gcccgttatcggaaccagaccagccaggcggagtcgtactaccgacacgcagctcagctg
gtcccatcaaacggtcagccctacaaccagctggccatcctggcctcctctaagggagac
cacctcaccaccatcttctactactgccgcagcatcgcagtcaagttccccttcccagca
gcctccaccaacctgcagaaggccctatccaaggctctggacagccgtgatgaggtgaag
accaagtggagcgtgtctgacttcatcagggccttcatcaagttccacggccacgtctac
ctgagcaagggtctggacaagctggacgtcctgagggacaagctggaggagcagtttcag
cggctgattttgcagaaggccttcagctcccagcagctggtccacatcaccgtcatcaac
ctgtttgaactccaccacctgcgagacctgacgggggacggccgcgagcagacctacagc
agcgagcagcagatcatttggttccagctgctgggcctcttcgtgtccttccttggtgtg
atgttcagctgggtccttttgaacaagaacaggggcgaggacaccatgggggagtgtcct
ctgccagccatcaagctgtccttggactggctcaagctaaggcccagtgtcttccaggag
tctgctgtggagaagaggaagtacatctggccctggctggtgtccatcctcaacagcttc
cagcccagagaggaggacatgtccttctcctcagtcatgccgctgccagaggagtttgag
ctccagggattcttggcactgcgacctgctctgaggagtttggactttgccaaaggtcac
caggggatcctggtggaccgggacggcctgcccatttctgcccggcaccagcgcctcatc
ggtctgggtcgatggatgtgtgaaaaccagccggggctgatccggtacagagtgagcgag
gacggactcctcatcttcatcactgacattccagaggaggccattgaggagccacaggac
aaggaggtaccggtgctgcaggagtcgtccaatggagagcagactcccaacgatggcggc
aacacgggcctcaagtcggttctgtccactggaaagacgcagagctcctggcccgacagt
ggcgagcgacccattgtcaccttcaaggagaacatcaaacccagagagcagagccatgat
cttactcggagccacctgcagaaagactcctgcaaggagcgccgggaattctccaaagga
gctggagcttctgctgggaaaggggagctgaagaaggacgggaagaggaagagcgaggtg
aaggcccagccggagctgaggaagactccggtcactcagacccagaccaccagctcttcc
cagttcatccccatccatcaccctggagccttccccccgctgcccagcagacctggtttt
cctccttcggcctacatgatcccgtctccggtggcgttcccgggactccaggtgaatcca
ggattcaccttctctaccggaccgttcctccagtcagccgttcacacccagaccggaggt
caggtccaggccgggaagcagtcccacattccctacagccagcagagaccctcgggccag
gggccaggtccgggccccatgaaccaggtccccacccagtctcctaccaaaccggtccag
caggtcgggatggggaagagtcctcctcacccctcggggcttccccagtacatgcaggac
cagccggcccagatgtggaaccaggcccaggtagctctgcagaagatgtctcccatgcag
atgtccatgaagccacctcagcagcctcctcagctacagcagaacttctacatgtccccc
caggatcccctgaagctctacgagaaccagctgcaatctcaggtgtccaacatggacaag
aagatgaagtaccccgacgtcaaggtccaggacttctacaggcagtccccctacagggtg
ggcgacagtctggccataatgtctgagaggatgaagaggcctctagagcacgaggtccct
gcaggacctcgtggtcccattttcgagcaggacaacaagacctcacctcttctacctcct
gacctgttaaaaactctagcagacctggaggaggacgaggagctggcctttgctaagcct
cctgatttcttccaggccctggctgctccccttagctctgctcctggaccaaatatcttt
cttcccaaccagacgaggatggagagcgaccccgaggttgtcagccagctgtcctccatc
cttcctatgaccagcttccccatgcaggagtacacccagaacagcatcttcagccaggcc
tacggcaaaaacctggccctcagctccaaacctgatgctcccataatgcaacaggagaca
tccctttactccctgttcgagggaactccctggtccccctccctccccgccagctcagac
cactccaccccggccagccagtccccccactcctcaaaccccagcagcctgccctcgtcc
cctcccacacacaaccacggacctgtgcccttctccaacttcgggcccattggcactccg
gacagccgggaccgcaggatggtggaccgctggaaggccgagaagcccggtacttttggt
ctggactacctgcaggcttcagccccctccacagggtctgacaccagctggcaccaagcc
agctccacaggcagctggaccaacccggagtctccaatggaagagtcatcctccactgta
cttctcgacagcctcaagtccatctggtccagctccatgatgcagcccggcccatcagct
ctggagcagctcctcctgcagcagaagcagaagcagcagcgaggtcatggcgccatgaac
ccgcctcactga
DBGET
integrated database retrieval system
