KEGG   Nothobranchius furzeri (turquoise killifish): 107373851
Entry
107373851         CDS       T05163                                 
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107373851 (polr1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nfu03021]
    107373851 (polr1a)
Enzymes [BR:nfu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107373851 (polr1a)
Transcription machinery [BR:nfu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     107373851 (polr1a)
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 Tropomyosin RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Laminin_II Sec10_N
Other DBs
NCBI-GeneID: 107373851
NCBI-ProteinID: XP_015797478
LinkDB
Position
Unknown
AA seq 1635 aa
MKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELS
ESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSV
AKLEKTIDDLEDELHLVEKKRSLINDFWKVHMKSRKCPHCRAGRSTVRREHNSKLIVTMP
SGGQTGDRTNEDLMTGKRVYLTASTAREHVNKVWEKEGFFLRCLFPGLEETSGSRASETG
FHPDLFFLELLVVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCGVIRKLLALLAGEKSP
EETEAGEPEDHAFLSGIPGQTLPDKLYNVWVRLQSHVNIVFDSDMDKLMTEKYPGIRQIL
EKKDGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNLKELR
QAVLNGPNVHPGASMVINEDGRRTILSATNFTQREAVAKQLLTPSPGPHKMPMKIVNRHI
KNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSE
LSRAEAYTLVSTNQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTQLVYRGLT
DKAGRVKLLPPAVFKPQCLWTGKQVVSTLLLNVIPEEAVPLNLMGSSKIPGKAWIQVPPR
AAPGYIPDSMCDSKVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGQTSGKLLSCLA
RLFTAYLQLYRGFTLGVEDILVKQGADVKRKKIIQQSLKIGTKALQAAFNLQPNVDPADA
RSRWQDAHLNPDQRDFSMADHKFKEVANQVNNDINKVCMPVGLHTTFPDNNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQ
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPRQFPFIEDNYEVIKTSQDLDSVLAHLDPQTASRHFAAIQRWKSKRDTP
CPRTGAFLLFSQKKLSKLREGTETASAVQQLVKKWQSLEDGGRAKYIKRSCRCPDPSLGL
FRPDVCFGSISENFHDITEKYLESRSGGRNAHSIRQLLHYKWQRSLCEPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAGSNIKTPMMSIPVLNNRKALKRA
KVLRKKLTRVCLAEVLQKVDVVETLRVENHQKLRIFKVMFHFLPPERYIDDKLLSPHQIL
HFMETRFFRLLLEAVKKRSAKLASIAVETRKATLRDKDIDGDATAGVDDEREEEETEIVD
DQGDEGDADASDAKRRSRQEEEVDYESEDEGDDAEEDQADLGQEAESQESPESNAVEESQ
HESAEVRVEKRKSRATRHAEESPSQMRVNSVLQLHSAIEGYSFDQQEELWCEVQLALPVN
KVHFDLTSVLSAIAENAVVMETRGLTRCLLSETMTKSGEKQTVLNTEGINMHEMFKYSDV
LDVNRLYSNEVHAMAQTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVY
KPLNRHAIQSNSSPLQQMTFETSYKFLKQATMLGSHDQLSSPSACLVVGKVVRGGTGLFE
LKQPLQQKPASSHAV
NT seq 4908 nt   +upstreamnt  +downstreamnt
atgaaggtcattgagaacagggccatgaaggatgaggagaagatggagctgcaggagatc
cagctgaaagaggccaaacacatcgctgaagaggcagaccgcaaatatgaggaggtggcc
cggaagctggtgatcattgagagcgacttggagcgtacggaggagcgtgctgagctgtcg
gagagcaaatgctctgagctggaggaggagctcaaaaccgtccagaacaacctgaagtcc
ctggaggctcaggcagagaagtactcccagaaggaggacaaatacgaggaggagatcaag
gttctcacagacaagctgaaggaggctgagactcgtgccgagtttgctgagagatccgtg
gccaagctggagaagaccatcgatgacttggaggatgagttacacctggttgagaagaag
agaagcttgataaacgacttctggaaggttcacatgaaatccaggaagtgtcctcactgc
agagcgggcaggtcaacggttcgccgtgaacacaacagtaagctgattgtcacgatgcca
tcaggaggacaaactggtgaccgcactaatgaagatctgatgactggaaagagggtctac
ctgactgccagcacagcccgagaacacgtcaacaaagtctgggagaaagaagggttcttc
ctaaggtgtctgttccctggactggaggagaccagtgggtctagagcctcagagacgggt
ttccacccggacctcttcttcctcgagctgctggtggttccaccttgcaggtatcgtcca
atcaaccgactcggggaccagatgttcaccaacggtcagacggtcaatatgcaggctgtg
atgaaggactgtggagtcatcagaaagcttctggctcttctagctggagagaagagccca
gaggagacggaggctggagagccagaggaccatgcctttctgtctgggattcctggacaa
actttaccagacaaactctacaacgtgtgggtccgcctgcagagccacgtgaacatcgtg
tttgacagcgacatggacaaactgatgacggagaaataccctggaatcagacagatcctg
gagaagaaggatggattgttccggaaacacatgatgggcaaacgtgtggactacgccgcg
cggtcggtcatttgtcctgacatgtacataggaacaaatgagataggaataccgatggtt
tttgccaccaagctgacctaccctcagccggtcacaccgtggaacctgaaggagctccgt
caggctgtcttaaacggtcccaacgttcacccaggagcctccatggtgataaacgaggac
ggcaggaggaccatcctgtccgctaccaacttcactcagagggaagctgttgctaagcaa
ctgctgacaccttctccaggtccacataagatgcccatgaagatagtgaaccggcacata
aaaaatggagatgtcttgttactcaacagacagcccacgctgcacagaccctccatccag
gctcactgcgctcgtatcctaccaggagagaaggtgctgaggctccattatgccaactgt
aaggcgtacaacgccgactttgacggagacgaaatgaacgctcacttccctcaaagtgag
ctgagcagagcagaggcctacaccttagtcagcaccaaccagcagtacctcgtgcccaag
gatggtaaacctttagcaggtctgatccaggaccacatggtatcagggaccaggatgacc
atacgaggctgcttcttcaccagagaccagtacacccagctggtgtacagaggactgacg
gacaaagccggcagagttaagctgctgcctccggccgtcttcaagccccagtgcctgtgg
acagggaagcaggtggtgtccacgttactgctgaatgtcatcccagaggaagctgtgcct
ctcaacctgatgggctcgtccaaaatccccggcaaggcctggatccaggtcccgcctcga
gccgctcctgggtacatacccgacagcatgtgcgactccaaggtggtgatccgacagggg
gagctgctggtcggggttctggataaggctcactatggttcctcagcctacggtttggtc
cactgctgctacgagctttacggagggcagaccagcgggaagctgctcagctgcttggcc
cggctcttcacggcttacctgcagctgtacagaggcttcaccctgggtgtggaggacatc
ctcgtcaaacaaggtgctgatgtgaagaggaaaaaaatcatacaacagtcgctgaagatc
gggacgaaagcgctccaggcagcattcaacctgcaacctaacgtggatccagctgatgcc
cggagtcggtggcaagatgctcacctcaaccctgaccagagagacttcagcatggctgac
cacaagtttaaggaggtggccaaccaagtgaacaatgacatcaacaaggtgtgcatgcca
gttggacttcacaccaccttcccggacaacaacctccagctcatggtccaatcaggagcc
aagggttctacggtgaacaccatgcagatctcatgtctgcttggtcagattgagctggag
ggccgcaggcctccactgatgccttctgggaaattcctgccgtgcttccagccttatgac
ccttcacctggtgccgggggctttgtttctgggcggtttctcacaggaatcaagccacag
gagtttttcttccactgcatggctggcagagagggactggtggacacggccgtgaagaca
tcccgatcgggatacctgcagaggtgtatcatcaagcacctggagggtttggtggtgcag
tacgatctgactgtgagggacagcgacggttctgtggtccagttcctgtatggtgaagat
gggctggacatccctaagactcagttcctgcagcccagacagttccccttcatcgaggac
aactatgaggtcatcaagacgtcccaggacctggacagtgttctggcccatttggaccct
cagactgccagtcgacactttgcagccatccagcgctggaaatcaaagagagacaccccc
tgtcctcgcacaggggcgttcctgctgttttcccagaagaaactgtctaaactccgagag
ggcacagagacagcctctgctgtccagcagctggtgaagaagtggcaatctctggaagat
ggtggcagagctaaatacatcaaaaggtcgtgccgctgcccagacccctcgctgggattg
tttcgtccggacgtctgcttcgggtccatttctgaaaactttcacgacatcacagagaaa
tacctggaaagcaggagcggcggcaggaacgctcacagcattcgtcagctgttgcattat
aagtggcagcgatctctgtgtgaacctggtgaggctgtgggcctgctggcagctcagtcc
ataggagagccctctacccagatgaccctcaacaccttccactttgctggcagaggagag
atgaacgtcactctgggaatccctcgcctgagggagatcctgatggtggctggttccaac
atcaaaacccccatgatgagcatcccggttctgaacaacaggaaagccttgaagagagct
aaagtcctgaggaagaaactcaccagggtgtgcctggctgaggtgctgcagaaagtagat
gtggttgagacacttcgtgttgaaaaccatcaaaagctgcggattttcaaagtgatgttt
cacttcctgcctcccgagcgttacatcgatgataaattactatctcctcatcagatcctc
cacttcatggaaaccaggtttttccgtcttctccttgaggctgttaagaagcgctcagcc
aaactggcctccatcgccgtggagacgaggaaggctaccctcagagataaagacattgat
ggagatgccacagctggggttgatgatgaaagagaagaggaggaaacggagatagttgat
gaccagggagatgaaggagatgctgatgcgtcagatgccaagagaagaagcagacaggag
gaggaggtggactacgaaagtgaagatgaaggtgatgatgctgaagaagatcaggctgac
cttggtcaggaggctgagagccaggaaagcccagagtccaatgctgtggaggagtcgcag
catgagtctgcagaagtgagagtggagaagaggaagagccgagcaacaaggcacgcagaa
gagtccccgtcccagatgagggtcaactctgttcttcagctgcactccgctatagaggga
tactcctttgatcagcaggaggagctctggtgtgaggtccagctggctttacctgtgaac
aaggtgcacttcgacctgacctcagttctgtcagcgatcgccgagaacgccgtcgtaatg
gagaccaggggccttacacgctgtctgctgagtgagaccatgaccaagtctggggagaaa
cagactgttctcaacacggagggcatcaacatgcatgaaatgttcaagtacagcgacgtc
ctggatgtcaacaggctgtactctaatgaagtgcatgccatggctcagacctacgggata
gaagtggctctaaaagtcatagagaaggagatcaaagatgtctttgctgtgtatggtatt
gaggtggaccccagacatctgtccctcgtggcagattacatgtgttttgaaggtgtttat
aagcctttaaaccgacacgccatccagtccaactcctcccccttgcagcagatgaccttc
gagaccagctacaaattcctcaagcaggccaccatgctgggatcacatgatcagctctca
tcgccctcagcctgtctggtggtgggtaaagtggtccgaggtggaacggggctgtttgaa
ctgaaacaaccgctgcagcagaaaccagccagcagccatgctgtgtga

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