Nothobranchius furzeri (turquoise killifish): 107373851
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Entry
107373851 CDS
T05163
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107373851 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107373851 (polr1a)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107373851 (polr1a)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107373851 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
Tropomyosin
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Laminin_II
Sec10_N
Motif
Other DBs
NCBI-GeneID:
107373851
NCBI-ProteinID:
XP_015797478
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MKVIENRAMKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTEERAELS
ESKCSELEEELKTVQNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAEFAERSV
AKLEKTIDDLEDELHLVEKKRSLINDFWKVHMKSRKCPHCRAGRSTVRREHNSKLIVTMP
SGGQTGDRTNEDLMTGKRVYLTASTAREHVNKVWEKEGFFLRCLFPGLEETSGSRASETG
FHPDLFFLELLVVPPCRYRPINRLGDQMFTNGQTVNMQAVMKDCGVIRKLLALLAGEKSP
EETEAGEPEDHAFLSGIPGQTLPDKLYNVWVRLQSHVNIVFDSDMDKLMTEKYPGIRQIL
EKKDGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNLKELR
QAVLNGPNVHPGASMVINEDGRRTILSATNFTQREAVAKQLLTPSPGPHKMPMKIVNRHI
KNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSE
LSRAEAYTLVSTNQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYTQLVYRGLT
DKAGRVKLLPPAVFKPQCLWTGKQVVSTLLLNVIPEEAVPLNLMGSSKIPGKAWIQVPPR
AAPGYIPDSMCDSKVVIRQGELLVGVLDKAHYGSSAYGLVHCCYELYGGQTSGKLLSCLA
RLFTAYLQLYRGFTLGVEDILVKQGADVKRKKIIQQSLKIGTKALQAAFNLQPNVDPADA
RSRWQDAHLNPDQRDFSMADHKFKEVANQVNNDINKVCMPVGLHTTFPDNNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMPSGKFLPCFQPYDPSPGAGGFVSGRFLTGIKPQ
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPRQFPFIEDNYEVIKTSQDLDSVLAHLDPQTASRHFAAIQRWKSKRDTP
CPRTGAFLLFSQKKLSKLREGTETASAVQQLVKKWQSLEDGGRAKYIKRSCRCPDPSLGL
FRPDVCFGSISENFHDITEKYLESRSGGRNAHSIRQLLHYKWQRSLCEPGEAVGLLAAQS
IGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVAGSNIKTPMMSIPVLNNRKALKRA
KVLRKKLTRVCLAEVLQKVDVVETLRVENHQKLRIFKVMFHFLPPERYIDDKLLSPHQIL
HFMETRFFRLLLEAVKKRSAKLASIAVETRKATLRDKDIDGDATAGVDDEREEEETEIVD
DQGDEGDADASDAKRRSRQEEEVDYESEDEGDDAEEDQADLGQEAESQESPESNAVEESQ
HESAEVRVEKRKSRATRHAEESPSQMRVNSVLQLHSAIEGYSFDQQEELWCEVQLALPVN
KVHFDLTSVLSAIAENAVVMETRGLTRCLLSETMTKSGEKQTVLNTEGINMHEMFKYSDV
LDVNRLYSNEVHAMAQTYGIEVALKVIEKEIKDVFAVYGIEVDPRHLSLVADYMCFEGVY
KPLNRHAIQSNSSPLQQMTFETSYKFLKQATMLGSHDQLSSPSACLVVGKVVRGGTGLFE
LKQPLQQKPASSHAV
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcattgagaacagggccatgaaggatgaggagaagatggagctgcaggagatc
cagctgaaagaggccaaacacatcgctgaagaggcagaccgcaaatatgaggaggtggcc
cggaagctggtgatcattgagagcgacttggagcgtacggaggagcgtgctgagctgtcg
gagagcaaatgctctgagctggaggaggagctcaaaaccgtccagaacaacctgaagtcc
ctggaggctcaggcagagaagtactcccagaaggaggacaaatacgaggaggagatcaag
gttctcacagacaagctgaaggaggctgagactcgtgccgagtttgctgagagatccgtg
gccaagctggagaagaccatcgatgacttggaggatgagttacacctggttgagaagaag
agaagcttgataaacgacttctggaaggttcacatgaaatccaggaagtgtcctcactgc
agagcgggcaggtcaacggttcgccgtgaacacaacagtaagctgattgtcacgatgcca
tcaggaggacaaactggtgaccgcactaatgaagatctgatgactggaaagagggtctac
ctgactgccagcacagcccgagaacacgtcaacaaagtctgggagaaagaagggttcttc
ctaaggtgtctgttccctggactggaggagaccagtgggtctagagcctcagagacgggt
ttccacccggacctcttcttcctcgagctgctggtggttccaccttgcaggtatcgtcca
atcaaccgactcggggaccagatgttcaccaacggtcagacggtcaatatgcaggctgtg
atgaaggactgtggagtcatcagaaagcttctggctcttctagctggagagaagagccca
gaggagacggaggctggagagccagaggaccatgcctttctgtctgggattcctggacaa
actttaccagacaaactctacaacgtgtgggtccgcctgcagagccacgtgaacatcgtg
tttgacagcgacatggacaaactgatgacggagaaataccctggaatcagacagatcctg
gagaagaaggatggattgttccggaaacacatgatgggcaaacgtgtggactacgccgcg
cggtcggtcatttgtcctgacatgtacataggaacaaatgagataggaataccgatggtt
tttgccaccaagctgacctaccctcagccggtcacaccgtggaacctgaaggagctccgt
caggctgtcttaaacggtcccaacgttcacccaggagcctccatggtgataaacgaggac
ggcaggaggaccatcctgtccgctaccaacttcactcagagggaagctgttgctaagcaa
ctgctgacaccttctccaggtccacataagatgcccatgaagatagtgaaccggcacata
aaaaatggagatgtcttgttactcaacagacagcccacgctgcacagaccctccatccag
gctcactgcgctcgtatcctaccaggagagaaggtgctgaggctccattatgccaactgt
aaggcgtacaacgccgactttgacggagacgaaatgaacgctcacttccctcaaagtgag
ctgagcagagcagaggcctacaccttagtcagcaccaaccagcagtacctcgtgcccaag
gatggtaaacctttagcaggtctgatccaggaccacatggtatcagggaccaggatgacc
atacgaggctgcttcttcaccagagaccagtacacccagctggtgtacagaggactgacg
gacaaagccggcagagttaagctgctgcctccggccgtcttcaagccccagtgcctgtgg
acagggaagcaggtggtgtccacgttactgctgaatgtcatcccagaggaagctgtgcct
ctcaacctgatgggctcgtccaaaatccccggcaaggcctggatccaggtcccgcctcga
gccgctcctgggtacatacccgacagcatgtgcgactccaaggtggtgatccgacagggg
gagctgctggtcggggttctggataaggctcactatggttcctcagcctacggtttggtc
cactgctgctacgagctttacggagggcagaccagcgggaagctgctcagctgcttggcc
cggctcttcacggcttacctgcagctgtacagaggcttcaccctgggtgtggaggacatc
ctcgtcaaacaaggtgctgatgtgaagaggaaaaaaatcatacaacagtcgctgaagatc
gggacgaaagcgctccaggcagcattcaacctgcaacctaacgtggatccagctgatgcc
cggagtcggtggcaagatgctcacctcaaccctgaccagagagacttcagcatggctgac
cacaagtttaaggaggtggccaaccaagtgaacaatgacatcaacaaggtgtgcatgcca
gttggacttcacaccaccttcccggacaacaacctccagctcatggtccaatcaggagcc
aagggttctacggtgaacaccatgcagatctcatgtctgcttggtcagattgagctggag
ggccgcaggcctccactgatgccttctgggaaattcctgccgtgcttccagccttatgac
ccttcacctggtgccgggggctttgtttctgggcggtttctcacaggaatcaagccacag
gagtttttcttccactgcatggctggcagagagggactggtggacacggccgtgaagaca
tcccgatcgggatacctgcagaggtgtatcatcaagcacctggagggtttggtggtgcag
tacgatctgactgtgagggacagcgacggttctgtggtccagttcctgtatggtgaagat
gggctggacatccctaagactcagttcctgcagcccagacagttccccttcatcgaggac
aactatgaggtcatcaagacgtcccaggacctggacagtgttctggcccatttggaccct
cagactgccagtcgacactttgcagccatccagcgctggaaatcaaagagagacaccccc
tgtcctcgcacaggggcgttcctgctgttttcccagaagaaactgtctaaactccgagag
ggcacagagacagcctctgctgtccagcagctggtgaagaagtggcaatctctggaagat
ggtggcagagctaaatacatcaaaaggtcgtgccgctgcccagacccctcgctgggattg
tttcgtccggacgtctgcttcgggtccatttctgaaaactttcacgacatcacagagaaa
tacctggaaagcaggagcggcggcaggaacgctcacagcattcgtcagctgttgcattat
aagtggcagcgatctctgtgtgaacctggtgaggctgtgggcctgctggcagctcagtcc
ataggagagccctctacccagatgaccctcaacaccttccactttgctggcagaggagag
atgaacgtcactctgggaatccctcgcctgagggagatcctgatggtggctggttccaac
atcaaaacccccatgatgagcatcccggttctgaacaacaggaaagccttgaagagagct
aaagtcctgaggaagaaactcaccagggtgtgcctggctgaggtgctgcagaaagtagat
gtggttgagacacttcgtgttgaaaaccatcaaaagctgcggattttcaaagtgatgttt
cacttcctgcctcccgagcgttacatcgatgataaattactatctcctcatcagatcctc
cacttcatggaaaccaggtttttccgtcttctccttgaggctgttaagaagcgctcagcc
aaactggcctccatcgccgtggagacgaggaaggctaccctcagagataaagacattgat
ggagatgccacagctggggttgatgatgaaagagaagaggaggaaacggagatagttgat
gaccagggagatgaaggagatgctgatgcgtcagatgccaagagaagaagcagacaggag
gaggaggtggactacgaaagtgaagatgaaggtgatgatgctgaagaagatcaggctgac
cttggtcaggaggctgagagccaggaaagcccagagtccaatgctgtggaggagtcgcag
catgagtctgcagaagtgagagtggagaagaggaagagccgagcaacaaggcacgcagaa
gagtccccgtcccagatgagggtcaactctgttcttcagctgcactccgctatagaggga
tactcctttgatcagcaggaggagctctggtgtgaggtccagctggctttacctgtgaac
aaggtgcacttcgacctgacctcagttctgtcagcgatcgccgagaacgccgtcgtaatg
gagaccaggggccttacacgctgtctgctgagtgagaccatgaccaagtctggggagaaa
cagactgttctcaacacggagggcatcaacatgcatgaaatgttcaagtacagcgacgtc
ctggatgtcaacaggctgtactctaatgaagtgcatgccatggctcagacctacgggata
gaagtggctctaaaagtcatagagaaggagatcaaagatgtctttgctgtgtatggtatt
gaggtggaccccagacatctgtccctcgtggcagattacatgtgttttgaaggtgtttat
aagcctttaaaccgacacgccatccagtccaactcctcccccttgcagcagatgaccttc
gagaccagctacaaattcctcaagcaggccaccatgctgggatcacatgatcagctctca
tcgccctcagcctgtctggtggtgggtaaagtggtccgaggtggaacggggctgtttgaa
ctgaaacaaccgctgcagcagaaaccagccagcagccatgctgtgtga
DBGET
integrated database retrieval system