Nothobranchius furzeri (turquoise killifish): 107373898
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Entry
107373898 CDS
T05163
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107373898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107373898
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107373898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Ntox28
Motif
Other DBs
NCBI-GeneID:
107373898
NCBI-ProteinID:
XP_015797524
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MYLINTREACLGTQPTKSLDSQQDWKPVPLLEHQGLELDLEVLTSSSTKASASFSECLRG
LFGPQTQQQSQTQPSQLHQQVTALSAPTLLGDERDSILAKWNQLQAYWGTGKGYYSNNNP
PVEFTQENSFCRFKAVGYSCIPVSKDEDGLVVLVLNKKEADVRAQQQQLVESLHKVLGSN
QTLSVNVDGVKALPNDQTEVIIKKNYTRSFFHRAQLKQLLQNAPAGVDPIIWEQAKVDNP
DPERLIPVPMVGFKELLCRLQIQEQMTKQHQTRVDVSKNISAVVSRFRKCGKKRGTRSGL
GVVWLSTAGTLGRISAVPRTVHRCKALYKDCFLPFFKSTALCIMAVYFKQCLRFSHVQHL
KQQQDGLSHLISVIKEDLEDIKLIEHGLSDRGHTRGGILS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcatcaacaccagggaggcctgtttgggaacacagccaaccaagagtctggat
tcccagcaggactggaaaccggtaccgctgctggaacatcagggtttggaactggatttg
gaggttttaacatccagcagcaccaaggccagtgcctccttttccgagtgtttacgaggc
ctgtttggcccgcagacccaacagcagagtcagactcagcccagccagcttcaccagcag
gtcaccgctctgtcggccccgaccctcttaggagatgaacgagactccatactggctaag
tggaaccagctgcaggcctactggggtacagggaagggctactacagcaacaacaacccg
cctgtggagtttactcaggagaactctttttgcaggttcaaggcagtgggatatagctgc
atcccagtaagcaaggatgaagatggtttagtggtgctggttctgaataaaaaggaagct
gatgttcgagctcagcagcagcagctggtcgagtcccttcacaaagtcctgggaagcaac
cagactctgtcagttaatgtagatggtgtcaaagccctgcccaatgaccagacagaggtc
atcattaaaaaaaattatacaagaagcttttttcacagagctcagctcaagcagctgctg
caaaatgctcctgcaggagtggaccccatcatctgggagcaggctaaggtggacaacccg
gaccctgagaggttaatccctgtgcccatggttgggtttaaggagctgctctgcagattg
cagatccaggagcagatgactaaacaacaccagacaagagtggatgtgagtaaaaatatc
tctgctgttgtttctagatttagaaaatgtgggaaaaaaagaggaacaagaagtggactc
ggcgtggtttggttatcaacagcaggaactctggggcggatctctgcggtgccaaggacg
gttcacagatgtaaagcgctatataaagattgctttcttcctttttttaaaagcacagct
ttgtgtatcatggcggtttattttaaacagtgtttgcgtttctcacacgttcagcacttg
aagcagcagcaagatggtttaagtcacctgatcagcgtcattaaagaagacctggaggac
atcaaactgatagagcatggactgagtgatcgtggccacacgagaggaggcatcctgagc
tga
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