Nothobranchius furzeri (turquoise killifish): 107374109
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Entry
107374109 CDS
T05163
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfu03009
]
107374109 (ddx54)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107374109 (ddx54)
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
Pre-60S particles
Helicases
107374109 (ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
107374109
NCBI-ProteinID:
XP_015797751
UniProt:
A0A1A8ALC1
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All DBs
Position
sgr02:54057612..54069558
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AA seq
857 aa
AA seq
DB search
MAQRKKKLTKKKKHTASREPQSDSDGGDFELAAEMKDDDSPGRKLPRFPAASDCLSDVEP
DTRELVRAQNKKKKKSGGFQSMGLSFPVFKGVMKKGYKVPTPIQRKTIPMILDGKDVVAM
ARTGSGKTAAFLVPMFEKLKAPQAQTGARALILAPTRELALQTMKFTKELGKFTGLKTAL
ILGGDSMEDQFAALHENPDIIIGTPGRLMHVVRDMNLKLHSVEYVVFDEADRLFEMGFAE
QLQEIIQRLPDTRQTLLFSATLPKLLMEFARAGLVEPVLIRLDVDSKLSDQIKLSFFHLR
VDDKPALLLHLLRNVVKPQEQTVVFAATKHHVEYLKELLSIEGIECSYIYSALDQTARKI
NIGKFVHRKAMVLLVTDVAARGIDIPLLDNVINYNFPSKAKLFLHRVGRVGRAGRSGTAY
SMICPDEMPFVYDLHLFLGRPVQFATADHTQDSDGVFGRVPQSILDDESSHLIVAHEKSL
ELQNLHHVSENAYKQYLKSRPNPSTESIRRVKNTDVSTMMVHPLLGSGLEKMELERLQIV
DAIKGYRSKSTIFEINSSSKTPASEVMRKKRSKDTRLVDKFSKHRDDLAAESRLQQSKSA
AISGLMHSTGQDDKDLKGVFSEVVGGKRKNTKEDGEERPKNKKIRQMGKDEEYFIPYRPK
DFDSERGLSLGGEASHFEQQASSAVLDLMGDEGDQLNQHKKHMKWDRKRKRFVRESGKED
KKKRMKTESGQIVSNKKKNFYEEWKKKYKVDDAGYGSDGEAAAAGGRRGSARGRGRRGAN
PRPSAGPQVTSGGRRIRSELKTSVQIMKTRKHKQKQQFLQKGGMKKIRSKNKQWLGEVKK
SGFGRGGQKKGKMRKRL
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atggctcagagaaagaagaaactgacgaagaagaagaaacacacggctagcagggagccg
cagtccgactctgacggcggagactttgagctggctgcggagatgaaagacgacgactca
ccaggtaggaagctgccgcggttccccgcagcatcagattgcctgtcagatgtggagcct
gacaccagggagctcgtcagggcccaaaacaagaagaagaaaaagtctggagggtttcag
tccatgggtcttagcttccccgttttcaagggtgtcatgaagaagggttacaaagtgcct
acccccattcaaagaaagactatccccatgattctggatggaaaggacgtcgtggcgatg
gctcggacgggcagcggtaagacagctgccttcctggttccgatgttcgagaagctgaaa
gctcctcaagcccaaacaggagcccgggcgctcatcctggcccccaccagagagctggcc
ctgcagaccatgaagttcacaaaagagttgggaaagttcacaggcctgaagactgctctg
atccttggtggagacagtatggaggaccagtttgctgctcttcatgaaaaccctgacata
atcatcggcactcctggccgtctcatgcatgtcgtcagggacatgaacctgaagctgcac
agcgtggaatacgtggtgtttgatgaggctgacaggttgtttgaaatgggttttgctgag
cagcttcaggaaatcatccagaggctcccagacaccagacagactctgctcttctctgcc
acacttcccaaactgttgatggagtttgccagagcggggctggttgaaccggttctgatt
cgcctggatgtggactctaaactcagtgaccagattaagttgtccttcttccatttgcgt
gtggatgacaaaccagcgctgctgctacacctgctgaggaatgtggtgaaacctcaggag
cagacggtggtgtttgctgccaccaagcaccatgtagagtacctgaaagagctgctgtct
attgaagggatagagtgctcctacatctacagtgccctcgatcagacagccaggaagatc
aacatcgggaagtttgtgcaccggaaagccatggtgctcctggtgactgacgtcgctgct
cgtggtatagacatccccctgctggacaatgtcatcaactacaacttcccttcaaaggcc
aaactcttcctgcacagagttggtcgtgtggggcgtgcgggtcgcagcgggacagcctac
agtatgatttgtcctgatgagatgccattcgtctacgatctccacctctttcttggaagg
cccgtccagtttgccacagccgaccacacacaagattcagacggtgtgttcggaagagtc
cctcagagcatcttggatgatgaaagttctcatctgattgtggctcatgagaaatccctg
gagctacagaatctgcaccatgtctcagagaacgcttacaagcagtatctaaagtccagg
ccgaacccctccacagagtccatcagacgggtcaaaaacacagatgtgtccactatgatg
gtgcatccattactaggttccggtttggagaaaatggaactggagcgccttcagatagtc
gatgccattaagggatatagatccaaatctactatttttgaaatcaactcaagcagtaag
acacctgcaagtgaggtgatgcgaaagaaacgctcaaaggacacacgattagtggacaaa
ttcagtaagcacagagacgacctggctgcagaaagcaggctgcagcagtccaaatcagct
gctattagtggcctgatgcacagcacaggccaggacgacaaggacctaaagggggtgttt
tcagaggtggttggtggtaagagaaaaaacacaaaggaagatggagaggagcgtccaaag
aacaagaaaatcaggcaaatgggtaaagacgaggagtatttcatcccttacagacctaaa
gactttgactcagagcgagggttgagtctcggtggagaggccagtcattttgaacaacaa
gcctcctccgctgtcctcgacctaatgggagacgagggcgatcagctaaatcagcacaag
aaacacatgaaatgggaccgtaagaggaagcgttttgtaagagaatcgggaaaggaggac
aagaagaagaggatgaaaacagagagtggtcagatcgttagcaacaagaagaagaacttt
tatgaggagtggaagaaaaagtacaaggttgacgatgcaggatatggatctgatggagaa
gcagcagcagcaggaggaaggagggggtcagcaagaggtcgtggccgccgaggcgccaac
ccccgcccttctgccggaccccaggtgacgtccggcggccgcagaatacgctcggagctg
aaaacgagtgtgcagataatgaagacccgcaaacacaagcagaagcagcagttcctgcag
aaaggagggatgaagaaaatccgttccaagaacaaacagtggctgggagaggtgaagaag
tccggcttcgggcgcggcggccagaagaagggcaagatgaggaagagactgtga
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