Nothobranchius furzeri (turquoise killifish): 107374411
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Entry
107374411 CDS
T05163
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107374411 (thoc6)
09122 Translation
03013 Nucleocytoplasmic transport
107374411 (thoc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107374411 (thoc6)
03041 Spliceosome [BR:
nfu03041
]
107374411 (thoc6)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107374411 (thoc6)
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107374411 (thoc6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_2nd
Beta-prop_NOL10_N
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
ANAPC4_WD40
Beta-prop_EML
WD40_Gbeta
EIF3I
NBCH_WD40
Beta-prop_ACSF4
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_SCAP
Beta-prop_VPS8
Beta-prop_WDR36-Utp21_1st
TRM82_WD
CFAP251_N
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR41
WDR54
Beta-prop_IP5PC_F
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_LRRK2
PAC11
DUF7099
ASA1
Beta-prop_SPT8
WD40_like
Motif
Other DBs
NCBI-GeneID:
107374411
NCBI-ProteinID:
XP_015798045
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLAAALSPEATTASQKPVLTFTAHE
GAVFSLLSTDCVLLSAGNGEISAWSWTELIKKNVKCLWTKRPNYRSSLEIPEINSMVINT
QDNSLVIGAGDNNVHILDLEHGDFKTALQGHTDYVHCVCVRERESELLSGSEDGSVRMWD
TRTGQCVHCIEVYKYESCVRPQYGKWISCVTTDSDWMVCGGGPSMSLWHLRSLSPTSVFP
LSGCQRQAAFHQDMILAVGQGAFVSHCLLGGDVKAQIPCTPSSLNTLQLNNSSEHRVLTV
GGSSSHIDVFTNLSYRTFSLSF
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggacccgtagagctcctccacatgtcggttttctcccagagcttttctccctgcgga
cgcttcctggcggccggaaacaactacggagagattgccttgttcagcttggctgcagct
ctaagtccagaagccaccaccgctagccagaagcctgttctgacgtttacagctcatgaa
ggtgcagttttcagtcttctgtccacagactgtgtcctgctgagtgctggaaatggagag
atcagtgcctggagctggactgaactcatcaagaagaatgtgaaatgtctttggacgaag
aggcccaactatagatcaagtctggagatcccagagattaactccatggtcatcaacacc
caagacaacagtctggtgattggagctggagacaacaacgtccacatcctggacctggaa
catggagactttaagacagcccttcagggtcacacagactatgtgcactgtgtgtgtgtg
cgtgagcgggagtccgagcttctgtccggcagcgaggatggatctgtgaggatgtgggac
accaggacgggccagtgcgttcactgcattgaagtctacaagtacgagagctgcgtacgg
cctcagtacggtaaatggatcagctgtgtgaccacagactctgactggatggtgtgtgga
ggaggtccgtcaatgtctctgtggcacctccgctctctgtccccaacatccgtgtttccc
ctgagcggctgccagcgccaggcagctttccaccaggacatgatcctggcagtggggcag
ggtgcatttgtgtctcattgtcttctgggtggagatgtcaaagctcagatcccatgcaca
ccctcaagtctcaacactctgcagctgaacaacagctcagagcaccgggtgctgacggtg
ggaggtagcagcagccacattgacgtgttcaccaacctgtcctacagaaccttctcactc
agcttctga
DBGET
integrated database retrieval system
