Nothobranchius furzeri (turquoise killifish): 107374727
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Entry
107374727 CDS
T05163
Symbol
dhx29
Name
(RefSeq) ATP-dependent RNA helicase DHX29
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
nfu03012
]
107374727 (dhx29)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107374727 (dhx29)
Translation factors [BR:
nfu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
107374727 (dhx29)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
HA2_C
DSRM_DHX29
HA2_N
AAA_22
nSTAND3
nSTAND1
AAA_16
DUF6183
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
107374727
NCBI-ProteinID:
XP_015798435
UniProt:
A0A1A7ZZG6
LinkDB
All DBs
Position
sgr02:61273297..61288688
Genome browser
AA seq
1375 aa
AA seq
DB search
MGGKKKKSAAQAAPLAACGSGSAVAGNGAVENSKKQTAAASSKTTKAAKDSKSKAPKTYS
FANTAQVDTGALSDKSILKVFIQADLEKKIIKLINDFRQENGDKGPISGRLTSKKLLDLY
TALQKFNFKREHIEEAMKSSVLYGGDLHSALDWLCLNLKDEELPDGFSQQLQEESQKSRP
KFQPPSQQKPAAQTPKASNSTVKENTKVTEKDEAAAMKDWILRYAEQSSDDEEEEEGGEQ
TRNPELDEKFDPNDRYLILTAQLYDAKEMAADAKTKGDKMGQRSAQERIRVTQQEMKRLE
SHPVFNPAIKVVDVPHKDKKTLPVTEDKDGLSFSLFEQAETNPPTEKVVKKNEPKDIRNF
DYTARSWTGKSPKQFLIDWVRKNLPKSPPPTFQKVAAGRYWKCKVRVQRADDVLEVCPTI
LTEDSMQAQHLAATLALYSLVKGQSVHQLLPPTYRDVWLEWRDNEQQQQEASRTAANKPR
DQFISRLLTRLKQQQNQDLQPACAGQRRVSGSNEEETEDTWENLAGLDIGGRGEEVEEKN
EKKGGRRGAGAALGEARELLQKLRRSPLALRLKAEREQLPVFQHRHRVLEALRRHPVVVV
AGETGSGKSTQIPQFLLEELLTGGKTAQPCNIVVTQPRRISAMSLACRVSQELGSDEGPG
SKSSLCGYQIRMENQSGEWTRLLYCTTGVLLRKLQHDRHLSSLTHIIVDEVHERSVQSDF
LLTILKDVVMKRSDLQLILMSATVDCEKFSNYFNRCPVISIPGRTFPVEVSHLEDIVEQT
GYVLEKDSEYCQKILEEEEEVSISVTQKGGKTLQHQEVILRDSSSGWDLGPDLDHFSSRT
RQVLQYMNPNKINMDLLVDLLDYLDKSPQFADVDGAVLVFLPGLAHIQQLYDLLSSDKRF
RNKNRYKIVALHSTLSSKDQAAAFTVPPAGVRKIVLSTNIAETGVTIPDVVFVIDTGKTK
ENKYHESSQMSSLVETFVSKASALQRQGRAGRVRNGFCFRLYPKFRFDAFMDYSVPEILR
VPLEELCLHIMKCQYGSPEDFLSRALDAPQPQSVSNAVNLLRKIGACDPNDHVLTPLGHH
LASLPVNVKIGKMLIYSAILGCLEPIATIAAAITEKSPFSTPMNRKEEANLAKAALALAN
SDHLTIYNAYLGWKRSQTEGLGAEMSYCRKHFLNRTALITIEDVKHELMKMMEQAGFWSS
RPSSSLKRQVSSLSKQQVSVLNAALTAGLYDSVARLLCSPPVDGLEQVACTVETPQGRAQ
VHPSSVNRNLQTHGWLLYQEKVKYTKIYLRDTTLISPFPMMLFGGDIDIQHREKLITLDG
WIHFQAPIRIGVIFKHLRKLMDSLLEKKLQNPRMSLEDDTTIQLILDVIKSEHTM
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaagaagaagaaatccgcggctcaagctgctccgctagcagcgtgcggctct
ggttcggctgtggctggaaacggtgcggtggagaattcaaagaaacaaacagcagcagcc
agcagcaaaacgaccaaagcagctaaagacagcaagtctaaagctccaaagacatacagt
tttgccaacacagcccaggtagacacaggtgcgctctcagacaagtccattcttaaagtg
tttatccaagctgacctagagaagaagatcatcaaactgataaatgacttccgacaggag
aatggagacaaagggcccatatctggcagacttacaagcaagaagttgctggacctgtac
acggccctacagaagtttaattttaagagggaacacattgaagaggcgatgaagagcagc
gttctgtacggaggagatcttcactctgctctagactggctttgtcttaacctgaaagat
gaggagttaccagatggcttcagccagcagctgcaggaggagagccagaagagtcggccc
aaattccagcctccttctcaacagaaacctgcagctcagaccccaaaagcctccaacagc
accgtcaaagagaacaccaaggttactgagaaggatgaagctgcagccatgaaggactgg
atattgaggtacgcagagcaaagcagcgatgatgaggaggaggaggaaggaggggaacag
acgcgtaatcctgagcttgatgaaaagtttgatcctaatgacaggtatttgatccttact
gctcaactgtatgacgctaaagaaatggcagctgatgccaaaaccaaaggagacaagatg
ggccaaaggtcggcacaggagcgaatccgggtcacacagcaagaaatgaaacggctggag
tcccaccctgtgttcaatcctgccataaaagtggtggatgtccctcacaaagacaagaag
acacttcctgtcactgaagacaaagacggtctcagcttcagcctgtttgaacaagcagaa
acaaaccctcctacagagaaagttgtgaagaaaaatgagccaaaggacattcgtaacttt
gactacacggctcgcagttggacaggaaagtctcccaaacagtttcttatcgactgggtg
agaaagaacctccccaaaagtcccccgccgacttttcagaaggttgctgctggcagatac
tggaaatgcaaggtgcgggtgcagagagctgatgatgtcctggaagtttgtccaaccatc
ttgaccgaggatagcatgcaggctcagcatctggcggccacactggctctctacagcctg
gttaaggggcagtcggtgcaccagctcctccctcccacctacagagacgtgtggctggag
tggagagacaacgagcagcagcaacaggaggcgagccgcactgctgctaacaaacccaga
gaccagttcatttcccggctcctgactagactcaaacagcaacagaaccaggacctgcag
cctgcatgtgcagggcagcggagggtcagcggctctaatgaggaggagacagaggacacc
tgggagaacctggctggtctcgacattggtggaagaggagaagaagtggaagaaaagaat
gagaagaaaggagggaggagaggagcgggagcagctctgggagaagcccgagagctcctg
caaaagctgaggaggtctccacttgcactcaggctgaaggcagagcgagagcagcttcca
gtcttccagcacagacatcgggttctggaggcgctgcggcgccacccggtggtggtggtg
gctggtgagacgggcagtgggaagagcactcagatccctcagttcctcctggaggagctg
ctgaccggaggtaaaacagcacagccctgcaacatcgtggtgactcagccgcgcaggata
tcagccatgagcctcgcgtgccgagtcagccaggagctgggcagcgacgaagggccaggg
tcgaagtcgtcgttgtgtggataccagatcaggatggagaaccagtctggagaatggacc
cgtctgctgtactgcacgaccggagttctgctgaggaagctgcagcacgaccgacacctc
agttcactgacccacatcattgtagacgaggtccacgaacgcagcgtccagtccgacttc
ctgttaaccatcctaaaagacgtcgtaatgaagagatctgacctgcagctgattctcatg
agcgccactgtcgactgcgaaaagttttccaactatttcaaccgctgcccggtgatcagc
atcccaggcaggacgttcccagtggaggtgtctcatttggaagatattgtggagcagact
ggatatgttctggaaaaggattctgagtactgtcaaaaaatcttagaagaagaagaagaa
gtctccatctctgtcacacaaaaaggtggcaagacattgcagcatcaggaggtcatcctg
agggactcctcttctggctgggatctgggtcctgacctggatcacttcagcagcagaacc
cggcaggtgctgcagtacatgaaccctaataagatcaacatggacctgctcgtggacctc
ctggactacctagacaaatccccccagtttgcagacgtggacggcgctgttctggtgttc
ctcccgggtctggctcatatccagcagctctacgatctgctctcttcagacaagaggttt
cggaacaaaaatcgatacaagatcgttgcccttcactccacgctgtcgtccaaggaccag
gcggctgccttcacagttccgcctgctggagtcagaaagatcgtgctgtcgactaacatc
gcagagacgggcgtgacgattcctgacgtcgtgtttgttatcgacactggcaagaccaaa
gaaaataaataccatgagagcagccagatgagctctctggtggagacctttgtttccaaa
gccagcgccctccagaggcaggggagagcaggacgtgtccgaaacggcttctgcttcaga
ctttaccccaaattcaggtttgatgccttcatggattactccgtcccggagatcctacgg
gtccctctggaggaactttgtcttcacatcatgaaatgtcagtacggctcaccggaggac
tttctgagtcgggcccttgatgctcctcagcctcagtcggtcagcaacgcggtcaacctg
ctgaggaagatcggagcgtgcgacccgaacgatcatgtcctcaccccgctgggacaccac
ctggcaagtctgccggtcaacgtgaagatcggcaagatgctcatctacagcgccatcctc
ggctgcctggagcccatcgcaaccattgcagctgcaatcacagagaagtctcctttttcc
acaccgatgaacagaaaggaggaggctaacctggctaaagctgctctggcattggctaac
tcggatcacctcaccatatacaacgcttatctagggtggaaaaggtctcagactgaagga
ctgggagcagaaatgtcgtactgcaggaaacacttcctcaatcgaacagctctcatcaca
atagaggatgtgaagcacgagctgatgaagatgatggagcaagcggggttctggtcgtct
cgcccttcctcttctctgaagcgccaggtgtcctcactgtccaagcagcaggtgtccgtt
ctgaacgcggcgctgacggctgggctctatgacagcgtggcccggctgctgtgcagcccc
cctgtggatgggctggagcaagtggcctgcaccgtggagacgcctcaaggcagagctcag
gtccacccgtcgtctgtgaaccgcaacctgcaaacgcacggctggctgctgtaccaggag
aaggtcaaatacacaaagatctacctgcgagacaccaccctgatatccccgttccccatg
atgctgtttggaggcgacatcgatattcaacacagagagaagctcatcactttagatgga
tggatccacttccaggccccaataaggatcggtgtgatcttcaaacatctgaggaaactg
atggactctttgcttgaaaagaagctgcagaaccccagaatgagtctagaagacgacaca
accatccagctgatcctggatgtgattaagtcggagcacaccatgtga
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