Nothobranchius furzeri (turquoise killifish): 107374746
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Entry
107374746 CDS
T05163
Name
(RefSeq) thrombospondin-4-B isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107374746
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107374746
09144 Cellular community - eukaryotes
04510 Focal adhesion
107374746
09142 Cell motility
04820 Cytoskeleton in muscle cells
107374746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107374746
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107374746
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107374746
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107374746
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107374746
Exosomal proteins of colorectal cancer cells
107374746
Exosomal proteins of bladder cancer cells
107374746
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107374746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
107374746
NCBI-ProteinID:
XP_015798465
UniProt:
A0A8C6KS37
LinkDB
All DBs
Position
sgr02:61807707..61831364
Genome browser
AA seq
940 aa
AA seq
DB search
MLVWTTLILASQLLNVEAQALVYDLLTSPDCLPDLLQGGLAEQGVNDAFILTSFKLLPKT
GTTVFSLYNPRDNSKYFEFTVMGKLNRAVLRYLRSDKRMSSITFNNLVLADGQQHRLLFH
LKGLQQQEPGGVELHLDCRLVETVRDLPAAFRGLPAGYGLVELKTMQARAQESLDELKLV
VGDSFENVASLQDCHFQQRDSVQTLGVNTKQLSNQMQELTKVINELKDVLIQQVKETSFL
RNTISECQACGQNIHSLGGTEVVKPSCGPGVCFRDDMCIETADGVECAPCPDGYTGDGFN
CDDVDECQFNPCFPGVKCVNTAPGFRCDACPLGYIGLPVEGVGIVFAQTNKQVCDDVDEC
KGPDNGGCTQNSHCHNSVGSFYCGSCKTGFTGDQVKGCEPELSCGNSLTNPCDVNAQCVR
ERDGSISCQCGIGWAGNGYMCGKDTDIDGYPDEKLKCKDPNCKKDNCIYVPNSGQEDVDR
DGLGDTCDDDADGDGIPNEQDNCWLKPNVDQRNSDKDSHGDACDNCRLVENPDQRDTDED
GKGDACDDDMDGDGLANFLDNCQRVQNRDQLDRDGDGVGDACDSCPDIPNPNQSDVDNDL
VGDSCDTNQDSDGDGHQDTKDNCPFVINSSQLDSDKDGLGDECDDDDDNDGIPDLLPPGP
DNCRLVPNPEQVDDNNDGVGDICESDFDQDKVIDRIDNCPENAEITLTDFRAYQTVVLDP
EGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIF
GYQDSSSFYVVMWKQTEQTYWQATPFRAVAEPGIQLKAVKSKSGPGEHLRNSLWHTGDTN
DQVRLLWKDPRNVGWKDKVSYRWYLQHRPQVGYIRVRFYEGSELVADSGVTIDTTMRGGR
LGVFCFSQENIIWSNLKYRCNDTIPEDFQEFSAQHAVDSI
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgttggtgtggacaactctcattctggcctctcagctgctgaatgtggaggcccaggct
ttggtttacgatctgctcacctcacctgactgcttgccagacctgctgcaggggggattg
gctgaacaaggggtgaacgacgctttcatcttaacatccttcaagttgctgcccaaaacc
ggaaccacggtgttcagtttgtacaaccccagggacaacagcaagtattttgagttcacg
gtgatggggaaactcaaccgagctgtgttacgttacctgcggagtgacaagagaatgagc
tccattacctttaacaacctggtgctggcggacggccaacagcaccgactgttgttccac
ctgaaggggctgcagcagcaggagccaggtggggtggagctgcatctggactgcaggctg
gtggagacggtcagggatctccctgctgctttccgaggtttgccggcagggtacggtctg
gtggagctgaagacgatgcaggccagggcccaggaaagcttagatgagctgaaactagtg
gttggagactcgtttgagaacgttgcttccctgcaagactgccatttccagcaaagagac
tctgtccaaactctgggggtcaacacgaagcagctgtctaatcaaatgcaggagttaacc
aaggtgataaatgaactgaaggatgtgctcattcagcaggttaaagaaacctctttcctc
agaaacaccatctccgagtgtcaggcctgcggtcagaacattcacagtcttggtggaact
gaggtggtgaagccgagctgtggcccaggtgtttgtttccgtgacgatatgtgcattgag
acggcggacggcgtcgagtgtgctccctgtccggatggatacactggagatggtttcaac
tgtgatgatgtagatgagtgccagtttaacccctgcttccctggagtgaagtgcgtgaac
accgccccaggtttccgctgcgacgcctgtcctctgggctacatcggcctgccagtggag
ggcgtgggtattgtgttcgctcagaccaacaaacaggtgtgtgatgatgttgatgagtgc
aaaggaccagataatggaggctgtactcaaaactcacattgtcacaactctgtgggctct
ttttactgtggcagctgtaagacaggtttcacaggagatcaggtgaagggctgcgagcca
gagctcagctgtggaaacagcctgactaacccctgtgatgtcaacgcccagtgtgttcga
gaaagagatgggtcaatctcctgccagtgtggaattggctgggccggtaacggatacatg
tgcgggaaggacacggacattgatggatacccagatgagaaactcaaatgcaaagaccca
aactgtaaaaaggacaactgcatttatgtccccaactctggtcaagaggacgttgacagg
gacggcctgggagacacatgtgacgacgatgcagatggggacggcattcctaatgagcag
gacaactgctggttgaagccaaacgtggaccagaggaacagtgataaagacagccacggc
gatgcctgtgacaactgccgcctggtggagaaccccgaccagagggacacggacgaggac
ggcaaaggcgacgcctgtgatgatgacatggatggagatggtctggcaaacttcctggac
aactgtcaacgtgtccaaaacagggaccagcttgaccgcgatggagacggagtgggagac
gcctgtgacagctgtcctgatatccccaaccccaaccagtctgatgttgataacgacctg
gttggagattcttgtgacacaaaccaagacagcgatggcgatggtcaccaggataccaag
gacaactgtccattcgtgatcaacagctcccagttggactctgacaaagacgggctggga
gacgaatgtgacgatgacgacgacaatgacgggatcccggatctcctaccaccaggaccg
gacaactgcaggctggtgccaaaccctgagcaggttgatgacaacaatgatggtgttgga
gacatttgtgagtccgactttgaccaggacaaagtgatcgacaggatcgacaactgtccc
gagaatgctgagattaccctgactgacttcagggcctatcagacggtggtcttggaccct
gaaggcgatgcccagattgaccccaactgggttgtcctcaaccagggaatggaaattgtt
cagaccatgaatagtgacccgggacttgctgttggctacactgctttcagtggagttgac
tttgaaggaacttttcacgtaaacacagttactgatgacgactacgctggcttcatcttt
gggtaccaggactcgtcctccttctacgtagtgatgtggaagcagaccgaacaaacgtac
tggcaggcaacgcccttcagagctgtggcagagcccggaattcagcttaaggctgtaaag
tctaaatcaggtcctggagaacacctgagaaattctctgtggcacacaggtgacactaat
gaccaggttcgtctgttgtggaaggaccccagaaacgttggctggaaggataaggtgtcc
taccgctggtacctgcagcaccgcccacaggttggatacatcagagttcgtttttatgaa
ggaagtgaactggttgcagactctggtgtcaccattgacaccacaatgagaggaggacga
cttggtgtcttctgtttctcccaagaaaacatcatctggtccaatctgaaatatcgctgc
aatgacaccatcccagaggatttccaggagttcagcgctcaacatgccgttgactcaatc
tga
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