Nothobranchius furzeri (turquoise killifish): 107374854
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Entry
107374854 CDS
T05163
Name
(RefSeq) nucleolysin TIA-1 isoform p40-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107374854
03041 Spliceosome [BR:
nfu03041
]
107374854
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107374854
Spliceosome [BR:
nfu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107374854
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107374854
NCBI-ProteinID:
XP_015798623
UniProt:
A0A1A7ZMI3
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Position
sgr02:66471786..66485589
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AA seq
386 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALILELFSQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
TETTSTKQLSFDEVLNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGNVVKCYWGKETTDMVQGPIQQVQMAQQNTLSFAAQ
PYNQWGQWYSNTQQIGQYVPNGWQVPSYSVYGQTWDQQGYNHLHAGAGWTGVGAVSNGGM
VEPGQGVNGTMLTNQAGMSATGYHTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagcccaaaaccctgtatgtggggaatctctcccgggacgtgacagag
gccttgattttggagttgtttagccagattggaccctgtaaaagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgaacatagacatgccact
gccacaattgcagctatgaatggtcggaaaatactgggtaaggaagtgaaggtcaactgg
gccacaacaccaacaagccaaaagaaagacacaagcagtcatttccatgtttttgttgga
gatctaagtcctgaaatcaccacagatgacattaaggctgctttcgccccttttgggaaa
atatcggattgtcgagtggtgaaagacatggccacgggtaaatctaaaggctatggcttt
gtttccttcttcaacaaatgggatgcagagaatgccattcagcaaatgggaggacagtgg
ttgggaggaagacagatcaggaccaactgggccacgaggaaacctgctcctaaaaccacc
actgaaacaaccagtaccaagcagctatcatttgatgaggtgctgaaccagtccagcccc
agcaactgtactgtctactgcggaggagtcacaaccggtctcacagaacaaatcatgaga
cagaccttctctccttttggccaaataatggaaattcgtgttttcccagagaagggctac
tcgtttgtgaggtttaactcccacgaggcagcagcccacgccatagtttctgttaacggc
acttccatagagggcaatgtggtcaagtgttactggggcaaggaaacgacagacatggtc
cagggccccatacagcaggtacagatggcacagcagaacacactgagctttgcagcacag
ccctacaaccagtggggtcagtggtacagcaacacccaacagatcggtcagtatgtccct
aatggatggcaggtgccgagctacagcgtctatgggcagacctgggatcagcagggctac
aatcatttacatgctggagctggatggacaggcgtgggcgccgtcagcaacgggggcatg
gtagagcccggacagggcgtcaacgggacgatgctaaccaaccaagcaggcatgagcgct
actggctaccacacccactga
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