Nothobranchius furzeri (turquoise killifish): 107374888
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Entry
107374888 CDS
T05163
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nfu03009
]
107374888
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
107374888
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107374888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
CCSAP
PCMT
Methyltransf_31
FtsJ
Ribosomal_L23
DUF383
Motif
Other DBs
NCBI-GeneID:
107374888
NCBI-ProteinID:
XP_015798665
UniProt:
A0A9D2YXQ4
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Position
sgr01:62584574..62587049
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AA seq
539 aa
AA seq
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MAEEVLGKTPTIFQEEQKSDADVDEDGTIQTNAEDMDKFRLPTAEESEKEGVLSLDLKTV
YQRIKDNIDVLCNFSSKREEGKDRVEYLALLRKDLCTYYSYNEFLVEKLMDLFPLSELVD
FLEANEIHRPVTIRTNTLKARRRDLAQALINRGVNLDPLGKWTKVGLVIFDSSVPIGATP
EYLAGHYMLQGASSFLPVMALSPQEGELVLDMSSAPGGKTTYIAQLMRNTGVIVANDANK
ERLKSVVGNIHRLRVTNTVVCNYDGRQFPKVMGGFDRVLLDAPCSGTGVIAKDPAVKTSK
DEVDIQRSAHLQKELILSAIDSVNAASPTGGYLVYCTCSITVEENEWVVDYALKKRNVKL
VPTGLDFGKEGFTSFKQFRFHPSLRLTRRFYPHSHNMDGFFVAKFKKFTNVIPSAAAGKG
DEKTDAAEATEAADSDKASQTKADGSKQNAKTNGAPAKKSGNLKSAEKKDLKAGPKKAKI
ARMEVKTEKGTEVKKSFSGPKVSTANKGGSKFEKKPGKKTKPSMKNKNRMENRLCNPNP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaggtcttggggaagacgccaactatatttcaagaggagcagaagtcagat
gctgatgtggacgaggatggcacgatacaaaccaacgcagaagatatggataaattcaga
ttgccgactgcagaggagagtgaaaaagagggtgttctgtctctagacctgaagaccgtc
taccagagaataaaggacaacattgatgttctttgtaatttctcctctaaaagggaagaa
gggaaagaccgagtggagtacctagcgctcctaaggaaggatctctgtacttattacagc
tacaacgagttcctggtggagaagttaatggacctcttccctctgtcagagttggtcgat
ttcctcgaagcgaatgaaattcacagaccggtcacgattcggaccaacacgctgaaagca
cggcggcgagacctcgctcaggctttaatcaacagaggagtaaaccttgatccactgggt
aaatggactaaagtgggtttggtcatctttgactcgtctgtaccaatcggcgcgaccccg
gagtacctggctggtcattacatgctgcagggagcctccagctttctgccggtgatggcg
ctctcgccgcaggagggagagctggtgttggacatgagctcagctcctggaggaaaaacc
acctacatcgctcagctgatgagaaacaccggagtgattgttgctaacgatgcaaataaa
gaaagactgaagagcgtggtgggaaacattcatcgtctcagagtcacaaacacagtggtc
tgcaactacgatggccgccagttcccaaaggtgatgggtgggtttgatcgagtgctgctc
gatgcgccgtgctcaggaaccggagtcatcgctaaagacccagcagttaaaaccagcaag
gacgaggtggacattcagcgctctgctcatttacagaaggaactgattctgtctgctatc
gactcggtgaatgcagcgtctcctaccggagggtatctggtctactgcacatgctcgata
acggtggaggagaacgagtgggtggtggactacgctttgaaaaaaagaaacgtcaaatta
gttccaacggggctggacttcgggaaggagggtttcaccagtttcaaacagttcagattc
catccttctctgcggctcacgcgacggttttacccgcactcccacaacatggatgggttc
tttgtggccaagtttaaaaagttcaccaatgtaattccttctgctgctgctgggaaagga
gacgagaagactgatgcggctgaggctacagaagccgccgattctgacaaagcctcccag
acgaaggctgacggctcgaagcagaacgccaaaacaaacggggcgccagccaagaaatca
ggaaacctcaagtcagcagaaaaaaaggacctaaaggctggaccaaagaaggcaaagatc
gccaggatggaagtaaagactgagaaagggacagaggttaaaaagtccttcagtgggccc
aaggtgtccacagctaacaaaggaggaagcaagtttgagaagaagcctggcaaaaagaca
aaaccgtccatgaagaacaagaacagaatggaaaatcgcttatgcaacccaaatccatga
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