Nothobranchius furzeri (turquoise killifish): 107374918
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Entry
107374918 CDS
T05163
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107374918 (rlim)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107374918 (rlim)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107374918 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107374918
NCBI-ProteinID:
XP_015798697
UniProt:
A0A1A8UVV0
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All DBs
Position
sgr01:complement(21989801..21998249)
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AA seq
647 aa
AA seq
DB search
MEGSDNAERGGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFSRLQQIKNGPEQQNNTTSTETSEEPVEQPESSEDAPGGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQEPPPQAPEVPEMVA
NPEPQTPMETEVVEEPVVEELAVSVEPEPELEEAVPQEVVGESPSPPAAPPEQAPPCSSP
RRGQRRARSRSPEPRRTRARLARSRSPFNLDQLDGLPNPRHPYISQSPSSSSNTPPAPQV
EGSSRTRQHILTRQSPADADAQPPRADPEAIPEIQQVGSQEGESPGTEGGAPGRRPPTIM
LDLQVRRVRPGEYRQRDSIANRTRSRSQNSNNTYLFESERGGFRRTFSRSERAGVRTYVS
TIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGTGTPADLE
TLNNTEANNLDTSGSADVEEHQQQPPVAPGVRGRTVEADVDEGLATGPQGSGNRARPRPP
ISLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEY
SEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacaatgctgagcgaggcggcagtgaccagccagagtcacaacgcagg
aggcagctggaccgcctggatagagaggaagctttctaccagtttgtcaacaatctcagt
gatgaggactatcgtcttatgagagataacaaccttttaggcaatccaggagaggtgaca
gaagatgagctatttagtagacttcaacaaatcaaaaatggtccagagcagcagaataac
accacaagcaccgaaacttctgaagaaccagttgaacaaccagaatcctctgaagatgct
cctgggggggatagcctcctggactggcttaacacagtgcgtcgcacaggcaatacgacc
aggactggtcatcgtggaaaccagtcgtggcgtgccgtaagccagactaaccctaatagt
ggtgattttcgcttcagcttggagattagtgtgaatcgaaatctggctgaacagcaagca
gctgctgaaggagaacaggagcccccaccgcaagctcctgaagttccagaaatggttgca
aatcctgaaccacaaacccccatggagacggaggtagtggaagaaccagttgtagaagaa
ctggctgtcagtgtagagccagaacctgaactagaagaagctgttccacaagaagttgtt
ggggagtctcccagcccacctgcagccccaccagaacaagcaccaccttgttcttctcct
cgtagaggacaaagaagagcccgcagccgtagtccagaacctcgcaggactagggcccgt
ttagccagaagccgctcccctttcaatctggatcaacttgatggtctacctaatccacga
catccttacatctctcaaagcccaagttcttcctcaaacaccccccctgcacctcaagtg
gagggcagttctcggactcgacagcacatccttacaaggcaaagcccagctgatgcagat
gctcagccacctagagccgatccagaagcaataccagagatccaacaagttggatcgcag
gaaggagagtctcctgggactgaaggaggtgcaccagggcgtcgtcccccaactataatg
ctcgatctccaggtgcgccgtgtgcgtccaggtgaatatcggcaaagggacagcatcgcc
aaccgtacccgttcccgctcccagaattcaaacaacacatatctttttgagagtgaacgc
ggtggttttcgtaggaccttctcacgctctgagcgtgctggtgtaaggacctacgtcagc
acaattcgaatccctattcgaagaatctcagatgccggtttgggagaagcaacctcaatg
gctcttcagtctatgatcaggcaaatcatgacaggctttggtgagctaggctaccttatg
gattcagactcggattcttccgattcaaaccgcggaactggcacacccgcagacttggaa
accctcaacaatacagaagcaaacaacttagacacttctggttctgctgatgttgaagaa
catcaacaacaaccaccggtggcacctggggttagaggacggacagtggaggcagatgtg
gatgagggccttgccaccgggccacagggttcaggtaacagggctcgacctagaccaccc
attagcctagaggagcccagctcgctgcccttccttcgacttgctcatttcttcctccta
aatgatgatgatgatgaccaacctcaggggctgactaaagaacagattgacaacctctcc
atgcgtaactttggtgagagtgacgccctgaagacctgtagtgtctgtataacagagtat
tccgaagggaacaaactacgtaagctcccttgctctcacgagtaccacgtccactgcata
gaccgctggctttctgaaaactccacatgccccatctgccgccgggctgttctggtatca
gccaaccgagagagtgtgatataa
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