Nothobranchius furzeri (turquoise killifish): 107374931
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Entry
107374931 CDS
T05163
Name
(RefSeq) laminin subunit gamma-3-like
KO
K06247
laminin, gamma 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107374931
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107374931
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
107374931
NCBI-ProteinID:
XP_015798708
UniProt:
A0A1A7Z9Q9
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All DBs
Position
sgr02:complement(69720141..69967745)
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AA seq
1633 aa
AA seq
DB search
MDTSFTVSTPRLSTFLCLYLHLHTLARAAMDSCYDEEGVPSRCMPKFENIAFNRTAMVSR
VCGSPPEDYCMQTGSTRSCHYCDASDPELHHNASLLTDFHRNDEPTWWQSPSMYYGIQYP
NSVSVTLHLGKSFEITYIRLQFYTSRPESFAIYRRTEEDGPWLPYQYYSGSCRKTYRKET
KGYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSLVLQEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVEGEQGGLVCVCQHH
TVGADCQRCHPFYQDRPWARATGDSANECLRCNCSGRSEECVFDLEQYRSTGSGGRCVNC
RDNTDGPHCERCLEYHTRKVPEEPCVPCNCNINGSVSLQCDVEGRCLCRVGVTGEKCDTC
QAGFHSLGPGGCRPCECDPRGSVDYCSSLDGRCYCKPNVEGQSCNRCKPGFFNLQQENLA
GCQPCFCFGHSRACSSSDRYAAVSITSDFIEDQDGWMGEFSGGLEYPLLWKEGEVYLLPL
SEEDTGYYKGPEKFLGHQVNSYGQLLSITFTSEAPELLPDHVTLILQGSGITLLAELSSE
PGLSHDPGLTPRRSFIVRLHEYEKRFEPHLSAFEFQHLLYNLTALKISNAGGHNYTSQLA
GVTLTSASIASHPNSPPALWVESCSCPRGLAGQFCERCTQGFTREDSSRGLLSACVPCNC
HHHGPCHPETGACECSDFTSGTTCEHCLDGYYGNALIGTPADCQPCPCPDRSSCAQIAQT
GQVVCTNCPAGQTGTRCQMCEDGYYGDPLGTSGMVQPCVRCSCNGNVDFNSVGVCDHITG
RCLRCLGHTEGDHCQRCQQGFYGDALNQTAGQKCKPCGCSSAGTSGHVNECHPQTGNCHC
LSHVTGRDCSHCEVGFFNLQPGMGCERCKCNPIGSLSSVCHPTTGECVCRAGVEGRLCDI
CRASFFGFSLRGCEACNCDPVGSVSMQCHSNGTCKCRQGFVGYKCDQCELNYFHNRATHQ
CDECPVCYGLVKKQAKELRTRLQDLEKLLAHFDCRGRSAEQHLLLKYHMARLYELHHQRE
DTFPNALEDFLAFQEAREAFIKQFSLLGASAGTLLAQLHGITFTLNCSIGVTEGEGEDIE
EDKRSRRVCQTLTETALVIRASEKQLQQATLDLDHMIIPFEAMSAPNKWNIMVNDSQVLM
KSHKEVADHIEAVASRVVQVSNRTFSLLMDLLQDNSTEEYIMNLTEKITEMQQLKKNLTS
ELNNTEAEHLALEEENVGLKLALGNITSSLPWLGLMDSRSEMNGTEFNQTHPTNTTEWGE
NFQKQTEELDQQIQKKENLISEISEKLEPLIRAAKRSLEKVEDIKVLQAHTQEATAVSLS
SVVMGKEVESEAFSLHREVENMVAQWPHQQAQTRAAVKKVRPLEDKVLVEVRKTVQKVEK
ALEAAVENSNLVINTTKEAEHIAQAAAQESKTILAQAKHTKTASTQLNTQLDAELQKLSE
QELLLKEATSHVTSEPAVSLTSMKEAIEAAKLQLEAYSSTLSELISKIDGSVPLERFDRI
LNETERRLSMLRGSVESPALSSKIQRLRTAAKEQQSRLSLIEQDIQEIREERDSLRDIAS
NLPQSCPRARGEA
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtcctttactgtgagtactcctcgcctgtccaccttcctctgtctttacctg
cacctccacactctcgcgcgggccgctatggactcctgctatgatgaagagggggtaccc
agtcgatgcatgcccaagtttgagaacatcgccttcaatcgcactgcgatggtgtcaagg
gtgtgcggctccccacctgaggactactgcatgcagaccggctcgacgcgctcctgtcac
tactgtgatgcatcagatccagagctgcaccacaacgccagcctcctgacagactttcac
aggaatgatgagcccacgtggtggcagagtccgtccatgtactatggcatccagtatccc
aattctgtcagcgtcaccctccaccttggtaaatcctttgagatcacctacatacggcta
cagttctacaccagtcgaccagagagctttgccatttacaggcgaacagaagaggatggg
ccatggttaccttaccaatattacagcggctcctgcaggaagacttacaggaaggagact
aagggttacattcgtcctggagatgatgaaagaaccgctttatgtacggatgaattcagt
gacatctcacccctcactggaggcaatgtggctttttccaccttggaaggtcgacccagc
gcatacaactttgaccaaagtctagtactgcaggagtgggtgacagccaccgacctgctc
atctccttggacaggctcaacacctttggcgatgagtttttcaaggatgctaaagtgttg
cgatcatatttttacgccatttccgacttctctgtgggtggcagatgtaagtgtaatggc
catgccagcgagtgcgttgagggggaacagggtggcctggtgtgtgtctgccagcatcac
acagtgggcgccgactgccagagatgtcaccctttttaccaggacagaccttgggccagg
gccaccggggactccgccaacgagtgtttgaggtgtaactgcagtgggagatcagaagaa
tgtgtgtttgacctggagcagtacaggagcaccggcagcggggggcgctgtgtgaactgc
cgagacaacacggacgggccccattgtgagcgctgcctagaataccacacaaggaaggtc
ccggaagagccatgtgtgccctgcaactgcaacatcaatggctctgtgagtctccagtgt
gatgtagagggaaggtgtttgtgtcgcgtcggtgtgacgggagagaagtgtgacacgtgc
caggctggcttccactcactgggacctggtggttgcaggccgtgtgagtgtgatcccaga
gggagtgtggactactgctcctctctggatggacgctgttactgtaagccaaacgtggag
ggccagagctgtaatagatgcaagccgggatttttcaatttgcaacaagaaaacctagca
ggctgccagccgtgtttctgttttggccactcgcgggcctgttcctcatctgatcgctac
gctgctgtcagcatcacttcagactttatcgaagatcaggatggttggatgggggagttc
tctggaggtctagagtaccctctgctgtggaaggaaggtgaagtctacctgctgccgctc
agcgaggaggacactggatactacaaaggtccagagaaattcctgggtcatcaggtcaat
agctacggccagctcctctccatcaccttcacctctgaggcccctgagctactcccggac
cacgtcaccctgattctccaaggttcaggaatcaccctgttggctgaactttcctccgag
ccaggactcagtcacgaccctggccttaccccgcggcgctccttcatcgtcagacttcat
gaatacgagaagagattcgagcctcatctgtctgcctttgagttccagcatctcctttac
aacctgacagctctgaagatcagcaacgccgggggacacaactacacatcacagcttgcg
ggggtaaccctgacctctgcttccatcgcctcccatccaaacagtcctcctgctctgtgg
gtggaatcttgctcatgtcctcgaggtcttgcgggccagttttgcgaacgatgcacccaa
gggttcacccgagaagattccagcagagggctgctctcagcatgtgttccatgcaactgc
caccatcatgggccctgtcatccagagacaggtgcgtgtgagtgctcagacttcacctcc
gggacaacctgtgagcactgcctggatggttactatggcaacgctttgattggcacgcct
gctgattgtcagccttgcccttgcccagaccgtagcagctgtgcccaaatcgcacagaca
ggacaggtggtctgcaccaactgccctgcaggacagacaggcacacgctgtcagatgtgt
gaagacggttactatggtgatcccctgggaacatctgggatggttcagccatgtgtgaga
tgcagctgtaatggcaatgtggatttcaactcagtgggagtgtgtgaccacatcacgggg
cgatgtttgaggtgcctgggccacacagagggcgatcactgccagcgctgccagcagggt
ttctacggcgatgccttaaaccaaacagctggtcagaagtgcaaaccatgtggctgcagt
tctgctggaacctctgggcacgttaatgaatgccaccctcagacaggaaattgccattgt
ctgagtcatgtgaccgggcgcgactgcagtcactgtgaagttggctttttcaacctccag
ccaggcatgggatgcgaaaggtgtaaatgcaacccaattggctcactgtcgtcagtgtgc
catccaaccacaggggagtgtgtgtgtcgtgcaggagtggaggggaggctgtgtgatatt
tgccgtgcgagcttctttggattctccttgcgaggttgcgaagcctgtaactgtgaccca
gtgggctcggtttccatgcagtgtcacagtaacggtacctgcaaatgtcgccaaggcttt
gtggggtacaagtgtgaccagtgtgagctgaattatttccacaacagagccacccaccag
tgtgacgagtgtccagtttgttatggcctggtgaaaaaacaggccaaggagcttcggact
cgcctgcaggatttggagaagctcctggctcactttgattgtcgaggtagatctgcagag
cagcacctcctgctgaagtatcacatggcaaggctttacgagctccatcaccagagggag
gatacttttcccaatgctctggaggattttctggcctttcaagaagcacgggaggccttc
ataaaacaattttccttgctgggagcttcagctggcacacttttagctcagctgcatggc
attacgtttactttgaactgcagcattggcgtgacggagggagagggagaggacatagag
gaggataaaaggagtagacgtgtctgtcagaccttaactgaaactgcactcgtgattaga
gcatctgagaagcagctgcagcaggcaacgctggacctggaccacatgatcattcctttt
gaagcgatgtcagcaccgaacaaatggaacattatggtcaatgactcacaggtcctgatg
aaaagtcacaaggaagtggcggaccacattgaggctgtggcaagcagggtggtgcaggtc
tcaaatcggactttcagcctcctgatggatctactgcaggacaactccacagaggagtac
atcatgaatctgacagaaaagataactgaaatgcagcagctaaagaagaacctgacatca
gagctaaataataccgaagctgaacatctggccctggaggaagaaaacgttggtttaaag
cttgccctgggtaacatcacgtcgtctttaccttggctgggtttgatggattccagatca
gagatgaatggaacagagttcaaccaaacacatccaaccaacacaaccgagtggggtgag
aactttcagaagcaaactgaagagctcgaccagcagatccagaagaaagaaaatctcatc
agtgagatcagcgagaagcttgaaccgctgatacgggcagccaagaggagcttggagaaa
gtagaggacattaaagttctgcaggctcacactcaagaagcaacggctgtgtctttgtca
tctgtggtgatgggaaaagaggtggaatcagaagcgttcagcctacacagagaagtagag
aacatggtggcgcagtggccccaccaacaagcccagaccagggctgcagtgaagaaagtc
agacctttggaggacaaggtgctcgttgaggtcagaaagacggtccaaaaggtcgagaag
gcgcttgaagctgctgtggagaactccaacctcgtcattaacaccacgaaagaagcagag
catatagcacaagctgcagcacaggaatctaaaaccatcctggcccaggccaaacatacc
aagaccgcatcaactcagctcaacacccagctagacgctgagctgcagaaactttctgag
caggagctgctactgaaggaagcaacgtcccacgtcacatcagagcctgcagtgtctctg
accagcatgaaagaagccatagaagcagctaaactccagctggaggcctactcttccaca
ctgagcgaacttatcagtaagattgatgggagcgtgccgctggagcggttcgatcggatc
ttgaatgagacagagcggcgtctgagcatgctgcgagggagcgtggagagcccggcgctg
agctccaagatccagcggctgcgcacggccgctaaggagcaacagagccgcctctccctg
atcgagcaggacatccaggagataagggaggagagagacagtctcagggacatcgcctca
aacctgcctcagtcctgcccgcgggccagaggagaagcctga
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