Nothobranchius furzeri (turquoise killifish): 107374990
Help
Entry
107374990 CDS
T05163
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
107374990 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107374990 (myo5b)
04131 Membrane trafficking [BR:
nfu04131
]
107374990 (myo5b)
03029 Mitochondrial biogenesis [BR:
nfu03029
]
107374990 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
nfu04812
]
107374990 (myo5b)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
107374990 (myo5b)
mRNA cycle factors
P-body specific factors
107374990 (myo5b)
Membrane trafficking [BR:
nfu04131
]
Others
Actin-binding proteins
Myosins
107374990 (myo5b)
Mitochondrial biogenesis [BR:
nfu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
107374990 (myo5b)
Cytoskeleton proteins [BR:
nfu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
107374990 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Ac76
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
107374990
NCBI-ProteinID:
XP_015798796
LinkDB
All DBs
Position
sgr02:complement(73640796..73672294)
Genome browser
AA seq
1683 aa
AA seq
DB search
MGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRFFATVGGSSRDAN
VEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIAFSRHYHIIGASMRTYLLEKSRVVF
QAEEERNYHIFYQLCASGSLPEFKELSLTSAEDFIYTSLGENIFIEGVNDAEDFKKTREA
FTLLGIKDSSQVSIFRILASILHLGNVEVQAERDGESCHISRNDVHLQHFCRLLGVELQQ
MEHWLCHRKLATASETYLKKMSSKQAVNARDALAKHIYARLFDWIVEHINKALQTSSKQH
SFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEQIPWTLIDFY
DNQPCIDLIEARLGILDLLDEECKVPKGTDQNWAQKLYKQHSSSEHFQKPRMSNISFIIV
HFADKVEYLCDGFLEKNRDTVYEEQINILKASQFQLVADLFQDKDGVSSSKPSKVNIRAL
KTVPKAPNKEHRKTVGHQFRSSLQLLMETLNATTPHYVRCIKPNDYKEAFSFDSRRAVQQ
LRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDMMLADKKQVCKNLLETLIKEPD
MFQFGKTKIFFRAGQVAYLEKLRTDRFRSACIKIQKTVRGWLQRIRYRKIRNSALALQRY
GRGYLARRYAELLRQRRAALICQKQFRMTRERRSFLKIRRAAVTIQAYARGMFTRRIYWE
FLLHHKAMIIQKAVRCWLQRRRFRRARDAAITIQCAFRCLRARRQLKQLKIEARSAQHLK
KLNTGMENKIVQLQRKMDEQSKELKTQNELLLTTNTSLSSEVTKLQKELVLVRTQQTDGD
RVASLQEEVERLQEELQEEKAERKRLEEEHSDEKLILTQRVEALEEDNALLKKQKEELNQ
QIQQQTRTSAEETSSMSLQRELDQERQRYQNLLKEFSRLEQRYDNLKEEVSLNKFHPGHQ
RNPSNQSSLESESPYPSISTSEVGDTEDSIQLVDEMGVEKAAMDIGLFLKLQKRVRELEV
ERKRLQVNLDKMEELSKRKGSESRTFISEEETADLAYNNLKRQELESENKKLKNDLNELR
KTVAERASQDTSSNELQDGYNLLLSQLKAANEELDARKEEVLILRTQIVSNTQLLERSQL
MESEKDTDLNNSKEPVDQEEALRAYHGLCESKKLLEAQLQTQTRQHRDELEALHTQIELL
KDDLEKKQEILNYTASLSPEAKVEYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLR
IYMKKVQELEVSHAAVQNRTTRPELSRQITVQRKEKDFEGMLEYSKQDEVRLIKTLITDI
KPSSVSATVPCLPAYILFMCIRHADYINDDQKVESLLTSTINAIKKVLKKNNEDFEMMSF
WLANSSRLLHCLKQYSGDETFMTQNTPKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKV
GEGIIHPMIVSAMLESESIPSLAGVKPMGYRNRSHSLDTDADGPTSYTLQALIRQLSQFT
SIMRDHGLDPEIVGQVVRQLFHCINAVTLNNLLLRKDVCSWSTGMQLRYNTSQLEEWLRA
NNLFQSKASSTLDPIIQAAQLLQVKKKTSQDAEAICSLCTALNVQQIVKILNLYTPLNEF
EERVTVSFIRNIQSCLQERNDPPQLLVDTKHTFPVLFPFTPSALSLETIHIPASLGLDFL
VRV
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgggagacatggacccgcacatctttgctgtggctgaggaggcgtacaaacagatggcc
agagacgagaggaaccagtccatcatagtgagcggagagtcgggagcagggaagaccgtt
tcagccaagtacgccatgaggttcttcgccacagtgggcggatcctcccgtgacgccaac
gtggaggagaaggttctggcctccaatcccatcatggaggccatcggaaatgccaaaacg
acccggaacgacaacagcagccgctttgggaagtacatccagatcgcgttcagccggcac
taccacatcatcggggccagcatgagaacgtatctgctggaaaagtcccgggtcgtgttc
caggccgaagaggagagaaactaccacatcttctatcagctgtgtgcctcaggcagctta
ccggagttcaaggagctcagcctaacaagtgcagaagacttcatctacacgtctttagga
gagaacatcttcatcgagggcgtgaatgatgctgaagacttcaaaaagacccgagaggcc
ttcactctgctggggataaaggacagtagccaggtcagcatcttcaggatcttggcctcc
attcttcacctggggaacgtcgaggtccaggcggagcgggacggagagtcctgccacata
tcgaggaacgatgtccatctgcaacacttctgcaggctgctgggcgtggagctgcagcag
atggagcactggctttgccacaggaagctggccacagcgtctgagacatatttgaagaag
atgtctagcaagcaggcggtcaacgcccgtgatgcgctcgccaagcatatctacgcccga
ctcttcgactggattgtggagcacatcaacaaggctcttcagacgtcctccaagcagcac
tccttcatcggagtccttgacatctacggcttcgagacgtttgagatcaacagctttgag
cagttctgcatcaactacgccaacgagaaactgcagcagcagtttaactcccacgtcttt
aagctggagcaagaggagtacatgaaggagcagatcccctggaccctcattgacttctac
gacaaccagccctgcatcgacttgattgaggctcggctcgggatcctggatctgctggat
gaggagtgtaaggttccaaaagggacggatcagaactgggcccagaaactctacaagcag
cactcaagcagtgaacacttccagaaacccagaatgtccaacatctccttcatcattgtt
cactttgctgacaaggtggaatatctgtgcgacgggttcttggagaagaaccgagacacc
gtctacgaggagcagataaacatcctgaaggccagccagttccagctggtggcagacctg
ttccaggacaaagacggtgtgtcctcctccaaaccgtccaaggtgaatatccgcgccctg
aagacggtccctaaagctcccaacaaggagcacaggaagaccgtgggacaccagttccga
tcatctctccagctgctgatggagaccctgaacgccacgacgccacactacgttcgctgc
atcaaacccaatgactacaaggaggccttctcgtttgactcccggcgggctgtgcagcag
ctccgggcctgtggggttctggagaccatccggatcagcgccgctgggtatccgtccagg
tggacgtacccagatttcttcagcaggtatcgagtcctgatgaagaaatctgacatgatg
ttagcagacaagaagcaagtgtgtaaaaacctgctggagacgctgataaaggagcccgac
atgttccagtttggaaagacaaagattttcttccgggccggtcaggtggcataccttgag
aagctgcggaccgacaggtttcgatctgcctgcatcaagatccagaagacggttcgaggc
tggctacagaggatccggtaccgtaagattcgaaattctgccctcgccctgcagagatac
ggccgaggatacttggctcgcaggtacgcagagcttctgcgtcagaggcgagccgccctc
atctgtcagaaacagtttcgcatgacccgagagaggaggagcttcctgaagatcaggcgg
gccgcggtcaccatccaggcctacgcccgagggatgttcacccgcaggatctactgggag
ttcctgctgcaccacaaggccatgatcatccagaaggccgtccgctgctggctgcagagg
aggaggttcaggcgagcgcgtgacgccgccatcaccatccagtgtgccttcaggtgtctg
cgggccaggaggcagctgaagcagctgaagattgaggcacgctctgcacaacacctgaag
aaactcaacacgggcatggagaacaagatcgtgcagctgcaaaggaagatggatgagcag
tccaaggagctgaagactcagaacgaactgctgctgaccaccaacacctctctgagttct
gaggtgaccaagctgcagaaggagctggttctggtccggactcagcaaaccgatggagat
cgggtcgcatcactgcaggaggaggtggagaggcttcaggaggagctgcaggaggaaaag
gccgagaggaaaaggctggaggaggagcacagcgatgagaagctgattctcacacagagg
gtggaggcgctggaggaagacaacgctctgctgaagaagcagaaggaggagttaaaccag
cagatccagcagcagaccagaacctctgcagaggaaaccagcagcatgtcgctgcagcgt
gagctggaccaggagcgccagcggtaccagaacctcctgaaggagttctccagactggag
cagagatatgacaacctgaaggaggaggtgtctctaaacaagttccatcctggccatcaa
aggaacccgtccaatcagagcagccttgagtcggaatccccctacccgtccatctccacc
tctgaggtgggagacaccgaagactccatccagctggtggacgagatgggggtggaaaag
gctgcgatggacatcggtctgttcctgaagctgcagaaacgagtgcgagagctggaggtg
gagaggaagaggttacaggtcaacctggacaagatggaggagctcagcaagcgcaagggt
tcggagtcacggaccttcatctctgaggaggagacggcagatctggcctacaacaacctc
aagagacaggaactagagtcggagaacaagaagctgaagaatgacctgaatgagctgagg
aagaccgttgctgagcgcgcgtctcaggacacctcgtccaatgagctgcaggacgggtac
aacctgctgctgagtcagctgaaagcggccaatgaggagctggatgcccggaaggaggag
gttcttattctgaggacgcaaatcgtgagcaacactcagctgctggagaggagtcaactc
atggaatctgagaaagacactgacctgaacaacagcaaggagccggtggaccaagaggag
gctctccgagcataccacgggctgtgtgagtctaaaaagctcctggaggctcagctccag
actcagacccggcagcaccgggacgagctggaggctctacacactcagatcgagctgctg
aaggacgaccttgagaagaagcaggagatcctgaactacacagcctctctgtctccagag
gccaaggtggagtacagtgtccagcaggagatcactcggctcaccaacgataacctggac
ctcaaggagctggtggagaaactagagaagaatgaacggaagctgaagaagcagctgagg
atctacatgaagaaggtccaggagttggaagtgtctcacgccgctgttcagaacagaacc
accagaccagagctgagccggcagatcaccgttcagaggaaggagaaggactttgagggg
atgctggagtacagcaagcaggacgaggtccgactcatcaagactctcataactgacatc
aaacccagctccgtgtcagccacggtcccgtgtctgcccgcctacattctcttcatgtgc
atccgccacgcagactacatcaacgatgaccagaaggtggagtctctgctcacctcaacc
atcaacgccatcaagaaagtcctgaagaagaacaacgaggactttgagatgatgtcgttc
tggttggccaacagcagccggctgcttcactgcctcaaacagtacagtggagacgagacc
ttcatgacccagaacacgcctaaacaaaacgaacactgtctgaagaactttgacctggcc
gagtatcggcaggttttgagtgacctgtctatccagatttaccagcagctcattaaggtt
ggcgagggcatcatccaccccatgattgtgtcggccatgttggagagtgagagcatcccg
agcctggcaggtgtgaagccaatgggctacaggaaccgttcccacagcttggatacagat
gcagatgggcccaccagttacaccctgcaggctctaattcgacagctaagccagttcacc
agcatcatgcgagaccacggacttgacccggagatcgtggggcaggtggttagacaacta
tttcactgcatcaacgctgtcaccttaaacaaccttcttctgcggaaagacgtctgctcc
tggagcaccggcatgcagctcaggtacaacaccagccagctggaggagtggctcagagcc
aacaacctgttccagagcaaagcctccagcacgttggaccccatcatccaggctgcccag
ttgctgcaggtcaagaagaaaacctctcaggatgctgaggccatctgctcactctgcacg
gcactgaacgtacagcagattgtgaagatcctgaacctgtacacgcctctgaacgagttc
gaggagagggtcaccgtgtccttcatcaggaacattcagagctgtctccaggagaggaac
gaccccccacagctgctggtggacaccaaacacaccttccccgttctgttcccgttcacg
ccgtcagccctcagcctggaaacgatccacatcccagcttcgctcggcctcgacttcctc
gtcagggtttga
DBGET
integrated database retrieval system
