Nothobranchius furzeri (turquoise killifish): 107375038
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Entry
107375038 CDS
T05163
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04310
Wnt signaling pathway
nfu04520
Adherens junction
nfu04916
Melanogenesis
nfu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107375038 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
107375038 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
107375038 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107375038 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107375038 (lef1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
107375038 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
107375038
NCBI-ProteinID:
XP_015798864
UniProt:
A0A9D2YBW7
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All DBs
Position
sgr02:complement(87546756..87598880)
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AA seq
456 aa
AA seq
DB search
MPQLSGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVHESESSP
NSNSHDAARQSQISQDSYHDKHRDHPEDGKHPDMYSKGHPYPSYPSYIMMSNMNSDSYMN
NGSMSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDASNKQGKRHA
DTTSFCVSWGCRRWLWLMLSLFMAIAASSLRQHHYKRPQKESGAGAKCFSVWRRLVLSNF
QCPLDKSLVAVNGEVMSPHEGLQLHMIKAGGAHGVAALLTLGTPDPCHVFILKGATIAAF
PPPDARLSFYYLIVFCLLLCFFNRKSQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVV
AECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKR
KREKMQESATGGKRNNFSTCKAKAAATGPLLEMEAC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctatcgggcggcggagacccggagctctgcgccacggacgaaatgatcccg
ttcaaagacgaaggagacccgcacaaggagcagatcttcgccgaactgagccactcggag
gaggagggagacctggcagacatcaagtcctctctggtccacgagtctgagagcagcccc
aacagcaacagccacgacgcagctagacagtcccaaatatcacaagattcctaccacgac
aaacacagagaccatccagaagatggaaaacatccagatatgtacagtaaaggccacccg
taccccagctacccaagttacatcatgatgagcaacatgaacagcgactcctacatgaac
aacggctccatgtctccgcccatgcccagaacgtccaataaagtccctgttgtgcagccg
tcccatgcagtccaccctctcacaccactgatcacgtacagcgatgagcactttgctcca
ggctcccattcaggccatcatccccaggatgccagcaacaaacaaggtaagagacacgcc
gacacaacgtcgttttgtgttagctggggatgcaggaggtggttatggctgatgctttca
ttattcatggcaatcgctgcctcaagtctgcgccagcatcactacaaaaggccacaaaag
gaatcaggagcgggagcaaagtgtttttcagtgtggagacgtttggttttaagcaacttc
caatgtcccttggacaaaagtttggttgctgttaatggtgaagtaatgtctccgcatgaa
gggctgcaactgcacatgattaaagcgggaggggcccacggcgtggcagcccttctcacg
ctggggacaccagacccctgtcatgttttcattttaaagggggccaccatcgcggcgttc
cctcctcctgatgctcgactctccttttattatctgatcgttttctgcctacttttgtgt
ttttttaacaggaaatcccagcacgaacagagaaaagagcaggagcccaaaaggccgcac
atcaagaagccgctaaacgccttcatgctctacatgaaagagatgcgtgcaaacgtggtc
gccgagtgcacgctgaaggagagcgccgccatcaatcagatcctgggccggaggtggcat
gctttatctcgggaagagcaagctaagtattacgagttagcccgcaaagaacggcagctc
cacatgcagctctacccaggctggtccgctcgagacaattatgggaagaagaagaagcgg
aagagggagaagatgcaggaatcggccacaggaggaaagcggaacaatttctccacatgc
aaagcaaaggcagcagctacagggcctctgctagaaatggaggcctgttag
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