KEGG   Nothobranchius furzeri (turquoise killifish): 107375088
Entry
107375088         CDS       T05163                                 
Symbol
wdr7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    107375088 (wdr7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nfu04131]
    107375088 (wdr7)
Membrane trafficking [BR:nfu04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    107375088 (wdr7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_CDC20-Fz ASA1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I CFAP251_N Beta-prop_ACSF4 Beta-prop_WDR41 Beta-prop_WDR3_2nd Beta-prop_VPS8 PAC11 WDR72_alpha-sol Beta-prop_IFT140_1st Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_SCAP KNTC1_N Beta-prop_Aladin Beta-prop_TEP1_C zf-MYND
Other DBs
NCBI-GeneID: 107375088
NCBI-ProteinID: XP_015798929
LinkDB
Position
sgr02:complement(77465097..77553824)
AA seq 1139 aa
MSGNNLVLPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMAPELKICPRAML
FGHTASITCLSKASSCSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
NGTQKEGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSRMQDLDPVFEEESKPIYCQGCQSISFCSFTQSSLLVVCSKYWRV
FDAGDYSLLCSVSSNNDQSWTGGEFISADKVIIWTEDGSSHIYMLPPSCLSASEHFRSDV
GKTKEGSVPPLIYRIAERSDKQLLICPPVTRFFFGRREPFHKLLIQGDSAGRLSLWSVPD
SSPRQPVGTSTAELQVSSSVSLQEAFDGLKPVSSGIIDQLSVLSGKEEPIKVTASVYIPS
QGRLVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCILYPYQVS
PRYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIVPPENCSTRVQHCICSVA
SDHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRC
VMGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLA
ADNADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEALIIQLLTEEAQRPNPMLVSP
ETLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSL
LEYNLTMDTAKLFMSCLHAWGLNEQLDSICLERLGMLRPHCPISFGLISRGGHMSLMLPT
FKESLLRQLSQATGRRLALSDIVGKGTYGVSRAVTTQHLLSAISLSNTLMGMTNATFVGE
HMKKAPARPPRPGGTPESPRRTPAAPSQPSNPALQAQIKQAAVAANTSTAATAGALGAPG
GLPPGAPGSHSPGPASHYILSVNEGWSQLAAMHCVMLPDLLGLDKYRPPLLEMLARRWQD
RCLEVREAAQALLLAELRRIGQSGRKDTIDMWAPYLPQYVDTVSSPGTTTEASPQAPPPP
EAQPIETKAPEEEMDVTDDDITAGRNNKGNSNQLLGRTNQDICGFRLFLRIYSWINSEE
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcggggaacaatttggtactacccatagtgctgtggggccgcacagctcccacccac
tgcatcagcagcttactggtgatggacgacttcagcaccatcatcacgggctgccacgat
ggacagatctgcctctgggacatggcacctgagttaaagatttgtcccagggccatgctg
ttcggtcacacggcctctatcacatgtctgtctaaagcctcctcctgcagcgacaaacag
tacatcgtcagcgcgtctgagagcggggagatgtgtctgtgggacgtgaatgatggacgc
tgtattgagtttaccaaactagcctgtgcccacactgggatccagttctaccagttcacc
aatggcactcagaaggagggacgcctgctctgtaacggtcattacccagaaatcctagtg
gtcgacgccaccagcctggaggttctgtactcgctggtgtctaagatttctccggactgg
atcagctccatgagcatcatccgatctcaccgcacacaagaggacacggtggtggcggtg
tctgtgacaggaatcctgaaggtctggatcattacagcggaggtcagcaggatgcaggat
ctggacccggtctttgaagaggagtccaaacccatctactgtcagggctgtcagagcatt
tccttctgcagcttcacacagagcagcctgctggtcgtctgctccaagtactggagggtt
tttgatgcaggcgattactcgctgctctgttcggtgtccagcaacaacgaccagtcgtgg
accggcggagagttcatctcagcagataaagtcatcatctggaccgaagatggcagcagc
cacatctacatgctgccgcccagctgtctctctgccagcgagcatttccgcagcgacgtt
ggaaaaaccaaagaaggttctgttcctccactgatttacaggatcgccgaacgatccgac
aaacagctcctgatctgtcctccggtgacccggttcttcttcgggcggcgggagcccttc
cacaagcttctgatccagggcgactcagctggtcgactgtctctgtggagcgtccctgac
tcgtcccctcggcagcccgtggggacgtccacagcagagctgcaggtgtcctcctccgtc
agcctccaggaggcgtttgacggcctgaagcccgtctcgtccgggatcatcgaccagctc
agtgttctgtctggaaaagaggagcccattaaggtgacggccagcgtttacatcccgtct
cagggacgcctggtgtgtgggagagaagacggcagcatcatcctggtgcctgccactcag
acggccatcgtgcagctgctgcaaggggagcacatgctcaggagaggttggcccccccac
cggaccctacgaggtcaccgtaacaaggtgacctgcatcctgtatccgtaccaggtgtcc
ccccgctacgaccagcgctcgctggtgtcgggaggagtggacttctccgtcatcgtctgg
gatattttcaccggagagatgaagcacatcttctgtgttcatggaggagagatcacgcag
ctcatcgtcccgccagaaaactgcagcacccgagtgcagcactgcatctgctcggtggcc
agcgaccactcagtgggcctgctcagcctcagagagaggaagtgcatcatgctggcgtcg
cgacacctcttccccatccaggtcatcaagtggcgcccggcagatgactacctggtggtg
ggatgttctgatggttccgtctacgtctggcagatggatacaggagccctggatcgctgc
gtgatgggaataaccgccgtggagatcctgaacgcctgcgatgagctcgccccagccacc
gtcgacgcgctgagtcactccgcggtgaacctaaagcaggccatgacccgccgcagcctg
gccgccctgaagaacatggcccagcacaaactgcagactctggccaccaacctgctggct
gcggacaacgccgacaagggtaacttgcccaaatactcccacaatgcactggtggtccag
gcgatgaagaccaatctgacagaccccgacatgcacgtgctgttctttgacgtggaggcc
ttgatcatccagctcctgacggaggaggcgcagcgcccgaaccccatgctggtgtctccg
gagaccctccagaagagccaggctggggccgacaagggggggtcgttcctggccaacaag
atcttcaagcaggtgaaagagaccatgaaggagaccatcaaggagcacctgctggatgaa
gatgaggaggaggaggaggagatgaggaggcgggaggagaagtccaagtctctgagtctg
ctggagtacaacctgaccatggacacagccaagctctttatgtcctgcctacacgcctgg
ggactcaacgagcagttggacagcatctgtctggagcgactgggcatgctcagacctcac
tgtcccatctccttcggcctgatctccagaggaggccacatgtccctcatgctgcccacc
ttcaaggagtctttgctgcgacagttgtcccaggcaacagggcggagactcgctttatcc
gacatcgtggggaaggggacctacggcgtctcgagggccgtcaccacgcagcatctcctg
tcagccatctctctgtccaacacgctgatgggcatgaccaacgccaccttcgtcggagag
cacatgaagaaagcgccggccaggcctcccagaccaggaggaaccccggagtctcctcgg
aggacgcctgctgccccctctcagccctccaacccggcgctacaggcccagatcaaacaa
gctgctgtagctgccaacaccagcactgctgccactgctggggctctgggggctcctggg
ggccttcctccaggggcccctggctcccatagccccggccctgcttctcattacatcctc
tcagtcaacgaaggctggagccagctggcagccatgcactgcgtcatgctgccggatctc
ctgggcctggacaagtaccgacctcctctgctggagatgttggcgaggaggtggcaggac
cgatgtctggaggtacgggaagcagcccaggctcttcttctggccgagttacgaaggatc
ggacagtcgggacgcaaagatacgatcgacatgtgggctccgtacctgcctcagtacgtg
gacacggtcagctcccctgggacaaccactgaagcctcccctcaggccccaccccctccc
gaggctcagccaatagaaaccaaggctccagaggaggagatggacgtcactgatgatgac
atcactgcaggtaggaacaacaaaggaaattccaaccagcttttgggaagaacgaatcag
gatatttgtggtttcaggctgtttttaagaatttatagttggattaattcagaggagtaa

DBGET integrated database retrieval system