Nothobranchius furzeri (turquoise killifish): 107375092
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Entry
107375092 CDS
T05163
Symbol
taf1c
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107375092 (taf1c)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
107375092 (taf1c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Motif
Other DBs
NCBI-GeneID:
107375092
NCBI-ProteinID:
XP_015798935
UniProt:
A0A1A7ZEH7
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Position
sgr02:77563707..77588751
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AA seq
1042 aa
AA seq
DB search
MDYQFPQQLFPSFYSCGPPDLSHRYCAEAGGWGSYHGVLPQGRGPPSSWTFTPKHQVSSE
TWTQTEPAVVPLLPPRRAFPRNGTPPDPLDFTEHMQNFYMDHGQDAFGCMGDILGEHFYF
RYKRNSKEKYRRGSISMWKVQRFLNMMNHLKCLQTYQSSSLNSYCCLMSDVIHEVPPDLL
GSLLYEELTEQRDRMLFPEGATGGALSFVPFSHDRGCLLYPGGLGQNHLNFHKVMLQHHG
LDLSRDAVSFQLKAPIRQISSSSLFSDCCVAVRSDRLCGVWRFSETNNPRLLQVVRTKEV
LTCVSASPHILGEVLVASESGAANLWTVGKGLQKVYAEDTNLYFNAKSSWRWCEFSAHPR
VMLYADRTGAELTDMRGNLTSGHTLFRISSSLECRSGERLLLSRYLGDVHPFHHLITTQY
SAYIMDERFPCTPMLKWDHMMKAPPIFCHVVPPSAASDSGKDKTTKVLLGSQRSQEIMML
QYSGGRVDPCYSRGSVQALLQPKESLKHLLDQVPHRLDIATKRLSAPATGLTCIRREARG
KGHSQESLCVLQLTEDGDIFYQVLEHKLQTRNTSGALALGDEHRPNVNNLPASRGGTPES
RPADSCAVVSETSSDEDVIGPTPTEAVPESQGSGSDSSSEESGGRDQTLKLMKLQVVVND
EQDAVSPSGNDAEERADEEVRRSSRHADATPVELSSRTLLTWKLWLQKLMLKSKDKHSGG
PRVDYFRTQTKSLLKLPKEDPRKATEKEKEKVSRMKMRSCMSSRSLLLHSSSSIKPPDVV
PLPGIVHPDEWIDELSSRLTVSWEGEEAWRAWWQDHLGMNRVTKAEALRSRRRREKEARR
AAGRCLELSSSFTSSISYQSDLDDFSISAGWSSAASQGEWTDVDEGGALSQLETFLRNET
NSTPSKLDGSRPPTPIATPECFIGDNNDPQTPKRPRPLPPTQPGSPEATPTSKRRTNRPA
RDYLDSLFGTQDDLFSLDGIPLSNTVDPSPQFPGSQSIPRRTAGSNRATNLFGSLASSQS
SQAGRGLSQGSEPKKKRSRMGF
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggattaccagttcccccagcagctgttcccttcgttttacagctgcggaccaccggat
ttatcccacaggtattgcgctgaagccggaggatggggctcatatcacggagttttacct
cagggccgcggtcctccgtccagctggacatttacacccaagcatcaggtcagcagtgag
acgtggactcagacggagcctgcggtggtccctctcctgcctcctagaagagctttcccc
agaaacgggacgcctccagaccctctagacttcacagagcatatgcagaacttctacatg
gatcacggccaggacgcgtttgggtgcatgggcgacattctgggagaacatttctacttc
agatacaaacggaattcaaaagagaagtatcggcgaggctccatcagcatgtggaaggtg
caacgctttctcaacatgatgaatcatctaaagtgtctccagacctatcagtcctcctct
ctgaactcgtactgctgcctgatgtcagacgtgatccacgaagtccctccagaccttctg
ggctccctgctgtacgaggagctgacggagcagagggaccgcatgctgttcccagaggga
gccaccgggggcgctctgtccttcgtcccattctcacacgacagaggctgcctactttat
cctggaggtctgggacagaaccacctcaacttccacaaggtgatgctgcagcatcacggt
ttggatctgagcagggatgcagtcagcttccagctcaaagctcccatcagacagatcagc
agctcttctctcttcagcgactgttgtgtggctgtgcgttcggatcgtctttgcggagtt
tggaggttcagtgaaaccaacaaccctcgtctgctgcaggtggtccgcaccaaggaggtt
ctaacctgcgtgagcgccagtcctcacattttaggtgaagttctggtggcgagtgagagc
ggagcggcaaacctgtggaccgtcggcaaagggctgcagaaggtctacgctgaagacacc
aacttgtacttcaatgccaagtcgtcgtggagatggtgcgagttttctgctcatcccaga
gtgatgctgtatgcagatcggacgggggcggagcttaccgacatgagggggaatttgact
tccggccacaccctgttccgtattagctcttctttggagtgtcggagcggggaaagactc
ctcctgtccaggtatctgggagacgttcaccctttccatcacctcatcaccacacagtat
tcagcatatatcatggatgagcgcttcccgtgcacgcccatgctcaagtgggatcacatg
atgaaggccccgcccatcttctgtcacgttgttccgccatctgctgcgtctgactcaggg
aaggataaaaccacaaaggttttgctcggctcgcagcgttctcaggaaatcatgatgctt
cagtactcaggaggacgagtggacccctgttacagtcgtggttctgttcaggctctactc
caacccaaagagagcctcaaacacctcctcgatcaggttcctcaccgcctggacatcgcc
accaaaaggctctctgcacctgcgacaggtctgacttgtatccggagagaagcacgggga
aaaggtcacagccaggagtccttatgtgtcctacagctgacggaggacggagacattttc
tatcaggtcctggaacacaagctgcagacgaggaacacgtctggagctctggctttagga
gacgaacaccgaccaaacgtcaacaacctcccggcgtcacgaggaggaacacctgagagt
cgtccagcagattcttgcgcagtcgtctctgagacgtcgagcgacgaggacgtcatcggt
ccaactccgactgaggctgttcctgagtcacagggttctggttctgattcttcttctgag
gagtcgggaggcagagatcaaacgctgaagctgatgaagctgcaggtcgttgttaatgat
gagcaggatgcggtttcgcccagtggaaatgacgctgaggaacgtgccgatgaagaggtt
cgacgctccagccgccatgctgatgcgactccggtggaactcagcagcaggactctcctc
acctggaaactttggctccaaaaactgatgctgaagagtaaagacaagcattcaggtggc
cccagagtggactatttcaggacccaaactaaaagtctgctcaaacttcccaaagaagat
ccacgaaaagcaacggagaaggaaaaagagaaagtctcgaggatgaagatgaggtcgtgc
atgtcgagtcgctcgctgctgctccacagctcctcctccatcaagcctcccgatgtggtg
ccactgccaggtatagtgcacccagacgagtggatagatgagctcagcagccgtctgact
gtctcttgggagggtgaggaagcatggcgggcctggtggcaggatcatctgggaatgaac
agggtgacgaaggcggaggctctgcggagcaggcggagaagagagaaggaggcgaggaga
gccgcgggtcgatgcttagagcttagcagcagcttcacctcctccatcagctaccagtct
gatctggacgacttctccatctcagccggctggtcgtccgcagccagtcagggagagtgg
acggacgtggacgaagggggggccttgtcccagctggaaacctttctaaggaatgaaacg
aactcaacgccttcgaaactcgatggaagtcgccctcccaccccaatcgctacacctgag
tgctttataggggacaacaatgaccctcagacacccaaaaggccacgcccccttccacca
acccaaccaggtagtcctgaggccacaccgactagtaagaggaggaccaaccgtccagcc
agggactacctggactctctgtttgggacacaggacgacctgttttcgctggacggcatc
cccctttctaacaccgtcgacccctccccccagttccccggctcccagtccattcctcgg
agaactgccgggtcgaatcgggccacaaacctctttggatcgctggcgtcctctcagtcg
tctcaggcggggcgggggctgtcccaggggtccgagcccaagaagaagagatctcgaatg
ggattctga
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integrated database retrieval system
