Nothobranchius furzeri (turquoise killifish): 107375167
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Entry
107375167 CDS
T05163
Symbol
pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04020
Calcium signaling pathway
nfu04510
Focal adhesion
nfu04518
Integrin signaling
nfu04540
Gap junction
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107375167 (pdgfb)
04020 Calcium signaling pathway
107375167 (pdgfb)
09133 Signaling molecules and interaction
04518 Integrin signaling
107375167 (pdgfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107375167 (pdgfb)
04540 Gap junction
107375167 (pdgfb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107375167 (pdgfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nfu04052
]
107375167 (pdgfb)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107375167 (pdgfb)
Cytokines and neuropeptides [BR:
nfu04052
]
Cytokines
Growth factors (RTK binding)
107375167 (pdgfb)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
107375167 (pdgfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
107375167
NCBI-ProteinID:
XP_015799042
UniProt:
A0A1A8UZU3
LinkDB
All DBs
Position
sgr02:81717975..81737622
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AA seq
567 aa
AA seq
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MRSWILMLLLAALLTIRLQLGNAEGDPLPPSLVDLVRNSPVSSVDDLKILLQQETNAIED
EEDEHDTLPNYTPGRHTRSIVDAEPAKKAECTVRTEVMEITRSMLDRRSVNFIPWPPCVE
VQRCSGCCNSRFIKCVPSVTSSRYLQVLKIMYKEGKSQYETVVITVEDHVRCMCKHPSSA
SSSTVSIPHSTSQSNPNPLPPPPQKPPLSPHIPVTPPRPAHPTSPKTHASKADLHRHDDL
KHNQQHRLLQEQEPVARQWQQGGYTQLVRWTQPRVNQPPTHVQTGVHQTVTGMIGSVSIW
PSEARAEPSMPQAGHGSGYDRSREESSVHISNGGGEVHADHEQRQQQLLQHQQRLRHQHH
HQYHQQFRYPQQYNQRGAEGHELRRQYWLNSPQSDSASSPASFTQLPRFEENSTPLLSAI
QKDSETTQGTDKQTETEKETLNKGNNGEESGSTVSGDSAGSELASQREGKDCNRSGEEGH
LTEGERRQKIGDGALEMGQSEPDKPSLLHPPQRPKAGLVKTGSSTAAPRSASVHQTPFRP
ASPHRRRRPRKRMSKRAMRAKLQKEMV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctggatcctgatgctgctgctggctgcgcttttaacgatccgtctgcagctc
ggaaacgctgagggggatccactccctccatcactggtcgacctggtgaggaattctcct
gtctcctctgtggacgacctaaagatactgctgcagcaggagacaaacgcaatagaagat
gaagaggatgagcacgatactcttccaaactatacccccggtcgacatactagaagtatc
gtggatgcagaaccagccaagaaggcagaatgtacagttcgaacggaagtgatggaaata
acgagatccatgctggaccgccgcagtgtcaacttcataccttggccaccctgtgtggag
gtgcagcggtgttcaggctgctgcaacagccggttcattaagtgtgtcccctcagtgacc
tccagcagatacctgcaggtattaaagatcatgtacaaagagggaaaatcccagtatgag
accgtcgtcatcacagtggaggatcacgtcagatgtatgtgcaagcatccttcgtctgct
tcctcttcgacagtctccatccctcactcgaccagtcagagcaaccctaatcctcttcca
cctccaccacaaaagcctcccctatccccccatattcctgtgacccctccccggcccgct
cacccaacttcacctaagactcacgcgtccaaagcggatctccatcgccacgacgacctc
aagcacaaccaacagcatcgccttttgcaggagcaagagccggtggcgaggcagtggcag
cagggaggttacactcagctggtgcgctggacgcagcctagagtaaatcaacccccaaca
catgtgcagacaggagtgcaccagacagtgacagggatgattggatcagtcagcatctgg
ccatctgaagcacgagcagagcccagcatgccgcaagctgggcacgggagcggctacgac
aggagccgcgaggagagtagtgtgcacatatcaaacggtggtggggaggtgcatgctgac
catgaacagaggcagcaacagctcttacagcaccagcagaggctgcggcatcagcaccac
catcagtatcatcaacagtttcggtatccacaacagtacaaccagagaggagcggagggt
cacgagctgaggagacaatattggctcaattctcctcagtcagacagcgcttcttcacct
gccagctttacccagcttcccagatttgaagaaaactccactcctctgctgtctgcgatt
cagaaagactcagagaccacacagggcactgataaacagacagagactgaaaaagaaacc
ctgaacaaggggaataacggggaggaaagtgggtcaacggttagcggtgactcagctggg
tcagagctagccagtcagagggaggggaaagactgtaatagaagtggggaggaaggtcat
ttaactgaaggagagagaagacagaagattggagatggagctctggagatgggacagagt
gaacctgataaaccatctctccttcatcctccgcagaggccaaaggcaggcctagtcaaa
acaggatcctctactgcagctcccaggtcagcttcagttcatcagacacctttccgaccg
gcttcgcctcaccgcaggaggagaccccgtaaacgcatgagcaaacgtgcaatgagagct
aagctgcagaaggaaatggtatag
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