Nothobranchius furzeri (turquoise killifish): 107375167
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Entry
107375167 CDS
T05163
Symbol
pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B
KO
K17386
platelet-derived growth factor subunit B
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04020
Calcium signaling pathway
nfu04510
Focal adhesion
nfu04540
Gap junction
nfu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107375167 (pdgfb)
04020 Calcium signaling pathway
107375167 (pdgfb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107375167 (pdgfb)
04540 Gap junction
107375167 (pdgfb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
107375167 (pdgfb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
nfu04052
]
107375167 (pdgfb)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107375167 (pdgfb)
Cytokines and neuropeptides [BR:
nfu04052
]
Cytokines
Growth factors (RTK binding)
107375167 (pdgfb)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Growth factors/receptors
107375167 (pdgfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
Motif
Other DBs
NCBI-GeneID:
107375167
NCBI-ProteinID:
XP_015799042
UniProt:
A0A1A8UZU3
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All DBs
Position
sgr02:81717975..81737622
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AA seq
567 aa
AA seq
DB search
MRSWILMLLLAALLTIRLQLGNAEGDPLPPSLVDLVRNSPVSSVDDLKILLQQETNAIED
EEDEHDTLPNYTPGRHTRSIVDAEPAKKAECTVRTEVMEITRSMLDRRSVNFIPWPPCVE
VQRCSGCCNSRFIKCVPSVTSSRYLQVLKIMYKEGKSQYETVVITVEDHVRCMCKHPSSA
SSSTVSIPHSTSQSNPNPLPPPPQKPPLSPHIPVTPPRPAHPTSPKTHASKADLHRHDDL
KHNQQHRLLQEQEPVARQWQQGGYTQLVRWTQPRVNQPPTHVQTGVHQTVTGMIGSVSIW
PSEARAEPSMPQAGHGSGYDRSREESSVHISNGGGEVHADHEQRQQQLLQHQQRLRHQHH
HQYHQQFRYPQQYNQRGAEGHELRRQYWLNSPQSDSASSPASFTQLPRFEENSTPLLSAI
QKDSETTQGTDKQTETEKETLNKGNNGEESGSTVSGDSAGSELASQREGKDCNRSGEEGH
LTEGERRQKIGDGALEMGQSEPDKPSLLHPPQRPKAGLVKTGSSTAAPRSASVHQTPFRP
ASPHRRRRPRKRMSKRAMRAKLQKEMV
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcctggatcctgatgctgctgctggctgcgcttttaacgatccgtctgcagctc
ggaaacgctgagggggatccactccctccatcactggtcgacctggtgaggaattctcct
gtctcctctgtggacgacctaaagatactgctgcagcaggagacaaacgcaatagaagat
gaagaggatgagcacgatactcttccaaactatacccccggtcgacatactagaagtatc
gtggatgcagaaccagccaagaaggcagaatgtacagttcgaacggaagtgatggaaata
acgagatccatgctggaccgccgcagtgtcaacttcataccttggccaccctgtgtggag
gtgcagcggtgttcaggctgctgcaacagccggttcattaagtgtgtcccctcagtgacc
tccagcagatacctgcaggtattaaagatcatgtacaaagagggaaaatcccagtatgag
accgtcgtcatcacagtggaggatcacgtcagatgtatgtgcaagcatccttcgtctgct
tcctcttcgacagtctccatccctcactcgaccagtcagagcaaccctaatcctcttcca
cctccaccacaaaagcctcccctatccccccatattcctgtgacccctccccggcccgct
cacccaacttcacctaagactcacgcgtccaaagcggatctccatcgccacgacgacctc
aagcacaaccaacagcatcgccttttgcaggagcaagagccggtggcgaggcagtggcag
cagggaggttacactcagctggtgcgctggacgcagcctagagtaaatcaacccccaaca
catgtgcagacaggagtgcaccagacagtgacagggatgattggatcagtcagcatctgg
ccatctgaagcacgagcagagcccagcatgccgcaagctgggcacgggagcggctacgac
aggagccgcgaggagagtagtgtgcacatatcaaacggtggtggggaggtgcatgctgac
catgaacagaggcagcaacagctcttacagcaccagcagaggctgcggcatcagcaccac
catcagtatcatcaacagtttcggtatccacaacagtacaaccagagaggagcggagggt
cacgagctgaggagacaatattggctcaattctcctcagtcagacagcgcttcttcacct
gccagctttacccagcttcccagatttgaagaaaactccactcctctgctgtctgcgatt
cagaaagactcagagaccacacagggcactgataaacagacagagactgaaaaagaaacc
ctgaacaaggggaataacggggaggaaagtgggtcaacggttagcggtgactcagctggg
tcagagctagccagtcagagggaggggaaagactgtaatagaagtggggaggaaggtcat
ttaactgaaggagagagaagacagaagattggagatggagctctggagatgggacagagt
gaacctgataaaccatctctccttcatcctccgcagaggccaaaggcaggcctagtcaaa
acaggatcctctactgcagctcccaggtcagcttcagttcatcagacacctttccgaccg
gcttcgcctcaccgcaggaggagaccccgtaaacgcatgagcaaacgtgcaatgagagct
aagctgcagaaggaaatggtatag
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