Nothobranchius furzeri (turquoise killifish): 107375319
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Entry
107375319 CDS
T05163
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107375319 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nfu03041
]
107375319 (dhx15)
03009 Ribosome biogenesis [BR:
nfu03009
]
107375319 (dhx15)
Enzymes [BR:
nfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107375319 (dhx15)
Spliceosome [BR:
nfu03041
]
Complex A
U2 snRNP components
U2 related factors
107375319 (dhx15)
Complex B
107375319 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107375319 (dhx15)
Ribosome biogenesis [BR:
nfu03009
]
Eukaryotic type
90S particles
Helicases
107375319 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_25
Atrophin-1
nSTAND3
AAA_7
T2SSE
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
107375319
NCBI-ProteinID:
XP_015799266
UniProt:
A0A1A8A216
LinkDB
All DBs
Position
sgr02:complement(87518191..87528344)
Genome browser
AA seq
762 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSDGRDRDRDRDREDRSRDRDRDRDRDRDRDRERDSKPSSAL
SNSTASVSGLPAIKQMTMQQQINPFTNLPHTPRFYEILKKRLQLPVWEYKESFNDIISRH
QSFVLVGETGSGKTTQIPQWCVEMVRALPGPKRAVACTQPRRVAAMSVAQRVADEMDVML
GQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILM
GVLKEVVRQRPDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLE
AAIRTVIQIHMCEEEEGDCLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLP
PQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRV
ESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQ
LKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAK
MVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTLLNVYHA
FKQNHESNQWCYDNFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFTSRDYYINIRRAL
CTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDI
KPEWLVKIAPQYYDMSNFPQCEAKRQLERIIAKLESKEYSQY
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaggcaccgtctggacttgggcgatgactactcgtctagtaagaagaggtct
gatgggagggaccgggaccgcgacagagaccgcgaggatcgctccagggatagggatcga
gacagagaccgggatagggacagagatcgggaaagggactcgaagccgtcttctgctctc
tccaacagcacagcgtctgtgtcaggcttaccagccatcaagcagatgaccatgcagcag
cagatcaaccctttcaccaacttgccacacacaccacgcttctatgagatcctgaaaaag
aggttacaacttccagtgtgggagtacaaagaaagtttcaacgatatcatctcacgccat
caaagttttgtcctcgtgggagaaactggctctgggaagacaacacagatcccacagtgg
tgtgtggagatggtgagggccttgcccggtcctaagcgggctgtcgcctgtactcagcct
aggagggtggctgccatgagtgtggctcagagggtggccgatgaaatggacgtcatgctt
ggacaggaagttggctactccatcagatttgaagactgtagctcagccaagactattctc
aagtacatgacagacggtatgttgttgagagaggctatgaatgatcctctgctggagcga
tacggcgtgatcatcctggatgaggcgcacgagcgcactcttgccacagatatcctgatg
ggggtgctgaaggaggtggttcgtcaaagaccagatctgaaggtgattgttatgagcgcc
acattggatgctggaaagttccaggtgtactttgacagctgcccactgctgactattcct
ggccgcacacatcctgtagagatattttacacccctgagccagagcgggattatctggag
gcagcaattcgtaccgtcatccagattcacatgtgtgaggaggaggaaggggactgcctt
ttgttcctcacaggccaggaggaaattgatgaggcctgcaagcgaatcaagcgtgaggtc
gatgacctcggccctgaggttggcgatatcaaaatcattccactgtattccacactgccc
ccccagcagcagcagaggatctttgagccgccacctccaagaaaacccaatggtgcaata
ggaagaaaggtcgtagtttcaacaaacatcgctgagacgtcactgacaattgacggtgtt
gtgttcgtcatcgatcctggatttgccaaacagaaggtgtacaatccccgtatcagggtg
gagtctttgctggtcactgccatcagtaaagcttctgcccagcagagggcagggcgagct
ggcaggacacgtcctgggaaatgcttccgcctctacacagagaaggcatacaaaacagag
atgcaggataacacatatcctgagattcttcggtccaacttgggatccgttgtgctgcag
ctgaagaaactcggcatcgacgaccttgtccactttgacttcatggatccaccggctcct
gaaacgctgatgagagctctcgagctgctgaattatctggcggctctaaacgatgacggt
gacctgacagagctgggttccatgatggcggaatttcctctggaccctcagctggcgaag
atggtgattgctagctgcgagtttaattgctcaaacgagatcctctccatcactgccatg
ctgtcagtcccacagtgtttcgtccgtcccacggaggctaagaaggcagcagacgagtcc
aagatgaggtttgctcacattgatggagaccacttgacgctgctcaatgtctaccacgcc
ttcaaacaaaaccacgagtccaaccagtggtgctatgacaactttgtaaactaccgttcc
ctgatgtccgctgacaacgttcgtcagcagctgtccaggatcatggaccgcttcagtttg
cctcggcgaagcacagagttcaccagcagagattattacatcaacatccgacgagcgctc
tgcaccggcttcttcatgcaggtggctcacttggagcgcactggccattacctcacagtc
aaagacaaccaggtggtccagctgcacccgtccaccgtcctggaccacaagcctgagtgg
gtgctctacaatgagtttgtcctcaccaccaagaactacatccgcacttgtacagacatc
aagccagagtggctggtgaagatcgcgccgcagtactacgacatgagtaacttcccacaa
tgtgaagctaaaagacaactggagcgaattattgccaagctggagagcaaagagtattct
cagtactga
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