Nothobranchius furzeri (turquoise killifish): 107375378
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Entry
107375378 CDS
T05163
Symbol
pkd2l1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107375378 (pkd2l1)
04040 Ion channels [BR:
nfu04040
]
107375378 (pkd2l1)
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107375378 (pkd2l1)
Ion channels [BR:
nfu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107375378 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_6
EF-hand_7
MCM_C
CYP38_PsbQ-like
Motif
Other DBs
NCBI-GeneID:
107375378
NCBI-ProteinID:
XP_015799342
UniProt:
A0A9D2YFF3
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Position
sgr03:complement(6438336..6449001)
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AA seq
807 aa
AA seq
DB search
MKCLNNRAESHLTGIVESELDSMGNGSWVNHGYCGSPPPIPREISTIYSPQTHFQGSMDG
MYTLDARGLIPEEPSSSDQTFSKKKRGCCSFIKGLWGTTWTENTSNSRESFIRTTLRELL
VYVVFLVDVCLLTYGMTSSSAYYFTTAMTNLFVNSPGASGVAFQSIGTMADFWTFAQGPL
LDGLYWTKWYNDQSLDSGNQSFIYYENMLLGVPRVRQIKIKNNSCIIPQDFVKEISGCYG
VYNEKKEDDIGFGLINGTAWTYHTEQQIKGSSYWGLLTTYSGAGYYQDLSRTKEESADIL
AELMDNLWLDRGTRVVFIDFSTYNANINLFCVITLVVEFPATGGALTSYQIRTVKLIRYI
TLWDYFILGCELVFCVFIFYYVVEEILELQIHKFSYFKSIWNILDIVIILLAIVAIIFNI
FRTAKVNNLLGKLLENPDIYADFEFLAFWQTQYNNMNAVNLFFAWIKIFKYISFNKTMSQ
LSTTLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTQVDTFSTFVNCIFTQFRIILGDFD
FNAIDSANRILGPIYFVTFVFFVFFVLLNMFLAIINDTYSEVKEELSSEEDELQISEFLK
QGYMKTFMKLKLKNEKIRDVQKALESGSGEIEFKDFRETLKEMGHSDHEISAAFSQFDHD
GNKILDANEQERMKMELKEKKVALNAELNNLGKNYEKDLRERPPVTSNEQKSQTSVDDDQ
FLKLAKQVLQIENSVAVVTSRIEMIMDKLGMQEQTKGTETTEKPSVTSKNSDKAPSDGVD
RAERGTTAERSSRKPAVLANSKFDPHM
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtctgaacaaccgagctgagagccacctgactggaatagtggagtcggagctg
gacagcatggggaacgggtcctgggtaaaccacggctactgtggaagcccgccacccata
ccccgggaaatcagcaccatctacagcccacagacgcacttccagggctccatggatggc
atgtacacactagatgcccggggcctaatcccagaggaaccttcctcctctgaccaaaca
ttcagtaagaaaaaacgaggctgctgctcgtttattaaagggttgtggggcaccacatgg
accgaaaacacgtccaacagcagggagtcgtttatccgaaccactctacgggaattgttg
gtctatgtggtgtttctggtggatgtttgtcttttgacatacgggatgaccagttccagc
gcctattatttcactacagccatgacgaacctgtttgtgaattcgcccggtgctagtggg
gttgcgtttcagtccattggcaccatggctgacttctggacgtttgcccaaggtccattg
ctggatggtctctactggaccaaatggtacaatgaccagtccctcgacagcgggaatcaa
tctttcatctattacgagaacatgctgctaggtgttcccagagtgaggcagatcaagatc
aagaacaactcctgcatcatcccccaagactttgtgaaagagatctccggatgttatggt
gtctacaacgagaagaaggaagatgacattggctttggtctcatcaatggcactgcttgg
acgtatcacacagagcaacagatcaaaggttcctcctactggggcttgctgactacctac
agcggagcgggatattaccaagatctaagtcggaccaaggaggagagcgccgacatcctg
gctgaactcatggacaacctgtggctggacagaggaaccagagttgtctttattgacttc
tccacatacaacgccaacatcaacttgttctgcgtcatcacgttggtggttgaattccca
gcaaccggtggcgcgctcacgtcctaccagatcagaacagtcaaactgattcgctacatc
accctctgggattacttcatccttggctgtgaactggtcttctgtgtattcatcttctac
tatgttgtggaggagatcttagagctgcagatacacaaattctcctacttcaaaagcatt
tggaacatactggatatcgtaattattctgctcgccatcgtcgccatcatcttcaatatt
ttccgaaccgccaaagtgaacaacttgcttggtaaactgctggaaaatccagacatctat
gccgattttgaatttctagcattctggcaaacacagtataacaacatgaatgcagtgaac
ttgttctttgcctggattaagattttcaagtacatcagtttcaacaagaccatgtcgcag
ctgtccaccacactgggtcgatgtgccaaagacattttgggattcgccatcatgtttttt
attgtttttttcgcttacgctcaacttggatatttactgtttggaacacaggttgacacg
ttcagcacttttgtaaattgcattttcacacagttccgaatcatccttggagactttgat
tttaatgccatcgatagcgcaaacagaattctggggcccatctacttcgtaacctttgtg
ttcttcgttttctttgttctgctgaacatgtttctggccatcataaatgacacctattca
gaggttaaggaggaactgtcttctgaagaggatgagcttcaaatatctgaattcctcaaa
cagggctacatgaagacctttatgaaactgaagcttaaaaacgagaaaatacgcgatgtt
cagaaggctctggagtctggatctggagaaatagaattcaaggacttcagagaaactctt
aaagagatgggacactctgatcatgaaatatctgcagccttctcacagtttgaccatgat
ggaaacaagattctagacgcaaacgaacaagaaaggatgaaaatggagctgaaggaaaaa
aaggttgctcttaatgctgaacttaacaatcttggaaaaaactacgaaaaagatttgaga
gagaggcctccggtcacatcaaacgagcaaaagagtcaaacctctgtggatgacgatcag
ttccttaagctggccaaacaagttcttcagattgaaaactctgtagccgtcgtcacatct
aggattgagatgatcatggacaaactgggaatgcaggagcaaactaaaggaactgaaaca
acagagaaaccgtcggtgaccagtaagaacagtgataaagctccttctgatggtgtggat
cgtgctgagagaggaacaacagctgaaaggtcatcaagaaaacctgcggtcctcgccaac
tccaaattcgaccctcatatgtga
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