Nothobranchius furzeri (turquoise killifish): 107375390
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Entry
107375390 CDS
T05163
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03430
Mismatch repair
nfu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107375390 (mlh1)
03460 Fanconi anemia pathway
107375390 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nfu03400
]
107375390 (mlh1)
DNA repair and recombination proteins [BR:
nfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
107375390 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Raftlin
Hfx_Cass5
Motif
Other DBs
NCBI-GeneID:
107375390
NCBI-ProteinID:
XP_015799363
UniProt:
A0A1A7ZFT8
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Position
sgr03:complement(6299349..6307715)
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AA seq
732 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASVSHVAHVTITTKTAEAK
CAYRASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPGDEYSRIVEVVSRY
AVHNSGKSFSVKKQGETVADVRTLPNASVTDNIRSIFGNAVSRELIEVNSEDQKLAFKMK
GYVSNANYSVKKCILILFINHRLVESSALKKAVETVYAAYLPKNTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGANSSRTYFTQTLLPGLSASGGSEEKAS
SAAAEPAERVYAHQMVRTDCRAQKLDAFLKPKEKQPADPETAGPSSGKTATNADQPGVTE
LKDIDDEDMMEALEEQEADLVEDQEESSIASLDGQRKRPRTEEEGQKEVDEELTAAASPK
RRVIKLNSVKDLRAEIAENTHKGLQEVLQSHSFVGCVNPQWALIQHHTKLYLLNATKLSQ
ELFYQILIYDFGNFGVLRLSEPAPLYDLVLLALDSADSGWTEEDGPKEGLAQYIVDFLKK
KAEMLEDYFSLEIDQEGNLTGLPLLLDSYTPIMEGLPMFILRLATEVNWDDEKDCFRDFS
KECSMFYSIRKQYILDPSEEQGAEGNSWRWRVEHVIFKAFRTLFSPPKIFSEDGTVLQIA
NLTDLYKVFERC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtgttatccggaggctcgacgagacggttgtcaaccgaattgctgccggagaa
gtcattcaacgtccagccaacgccgtcaaagaaatgatagaaaactgcttggatgcaaag
tcgacaaatatccaggtgacagtgaaggatggagggctgaaactcctccagatccaggac
aacgggaccggaatccggaaagaagatatggaaatagtctgtgaaaggttcaccaccagc
aaactccagacctttgaggacctttcggccattgcaacctatggattcagaggagaggct
ctggccagtgtaagccacgtagctcatgttacaataaccactaagactgctgaagccaag
tgtgcatacagagccagctacagcgatggaaaactcaaaggccctcccaaaccatgtgcc
ggcaaccaggggacgcagattctggtggaagaccttttctacaatgtgtccaccaggagg
aaagccctgaagagtcctggcgatgaatactccaggatcgtagaggtcgtcagcaggtac
gctgtacacaactcaggaaagagtttctcagtcaaaaagcaaggagagaccgtagcagac
gtgaggacgctacctaatgcgtccgtgacggataacatccggagcatattcgggaacgcg
gtcagcagggagctgatagaagttaacagtgaagatcagaagctggccttcaagatgaaa
ggctacgtctcaaacgcgaactactctgtgaagaagtgcatcctgattctgttcatcaac
catcgtctcgtggaatccagcgcgttgaagaaagcggtcgagaccgtttatgcggcgtac
cttcccaagaacacgcaccccttcctgtacctgagcctggaaatcgctccacagaacgtg
gatgtgaacgtgcaccccaccaagcacgaagtgcatttcctgcacgaggacagcatcatc
gagagtgttcagaagcacattgagagcaaacttctgggcgccaactcctcgcggacgtac
ttcacgcagacattgctgcctggattatcggcctcaggtggctcagaggaaaaggcctcc
agcgccgcggcggagccggccgagcgcgtctacgctcaccagatggtgaggactgactgc
cgcgctcagaaactggatgctttcctcaaaccaaaagaaaagcagcctgctgatccagag
acggctggtcccagcagcggcaagaccgccaccaacgccgaccagccgggcgtcacagag
ctgaaggatatagatgatgaagatatgatggaggctctggaagagcaagaagcagacctg
gtggaagaccaggaggaaagcagcattgcctctttggatggacaaagaaagaggccgaga
acagaggaggagggacagaaggaggtggacgaggagctgacggcggcagcctcgcctaaa
cgaagagtcatcaagctgaacagcgtcaaagatctgagagctgagatcgctgagaacaca
cacaaaggtcttcaggaagtgttgcagagccactctttcgtgggttgtgtcaatccgcag
tgggctttaatccagcatcacaccaaactctacctgctcaacgccactaagctcagccag
gagcttttctaccaaattctcatttacgactttggaaactttggcgtcctcagactatct
gaaccagctcctctttatgacctcgtcttgctggcgttggactcggcggacagcggctgg
actgaagaggacggccccaaggaaggcttagctcagtatattgtggattttttgaagaaa
aaggctgaaatgctggaggactacttttctctggagatagatcaggaaggaaatctaaca
ggcctgccgctcctcctcgactcatacactcccatcatggagggcctcccgatgttcatt
ctccgccttgcgactgaagtaaactgggatgatgaaaaggactgcttcagagacttcagc
aaggagtgcagcatgttctactccatcaggaagcagtacatcttggatccaagcgaggaa
cagggtgccgaggggaattcttggcgctggagagtcgaacacgtcatctttaaggcgttt
cgaacgctcttcagccctccaaagatcttcagcgaggatggaacggtgctgcagatcgct
aacctcactgatctctacaaagtttttgaaagatgctaa
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