Nothobranchius furzeri (turquoise killifish): 107375523
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Entry
107375523 CDS
T05163
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107375523 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107375523 (papolg)
Enzymes [BR:
nfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
107375523 (papolg)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
107375523 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
107375523
NCBI-ProteinID:
XP_015799580
UniProt:
A0A1A8V384
LinkDB
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Position
sgr03:8438382..8469685
Genome browser
AA seq
827 aa
AA seq
DB search
MKEMSSAMPGGQQPQKHYGITSAISLAPPREIDHLYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNLVKEWIAEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERTDFFQSFFEKLKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNILG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMTEEFKHGLSVTDEILQGKAEWPKLF
EPPSFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEFITLAHVNSQSFP
GFKETTENDFVSMWFIGIIFKKVENAESVNIDLTFDIQSFTDTVYRQANNINMLKDGMKI
EATHVKKKQLHQYLPPELVQRKKRSIAELNRSSNSESSKRISLDGSALDSSRETDSGTPF
SSPNSKAPPSETNEGVSPPKKIFVEDSPTPSTTTAANEPGLSIPVIGSKPPGKAKPASPP
PASTSTTTVLSEDVTPSATSSPKEEPNGLINGAPAKRPHSPTQEEAAKRHKDQPALNDDC
IFKEPYPPSSETNPHGDAPSTPPQPEVKAKPIPTIDTSRTQRLPSMELPDASSPLPASNS
CRVVKNSIKLALNRTNMTPPKPPVFDGALTTEAPPTSEEKGMSIPVIGSKHAASKHVTPP
VGSSIPTLVSRVADPLNGAASKRPHSPALEEQTKRLKETEKDRIHTS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcgccatgcctggtgggcagcagccgcagaaacattacggcatc
acctctgccatcagcctggcacctcctagagaaatagatcatctgtacaccaagaagctc
tgcgatgccatgaaaccgttcggtgtgtttgaggatgaagaggagctgaaccacagactc
gctgttctcgggaagttaaacaaccttgttaaagagtggatcgcagaaatcagtgaacta
aagaaccttccaccatcagccattagctgtgtcggcggcaagatatttacgtttggttca
tacagactaggagtgcacacaaagggagctgatattgatgccttgtgtgtggcaccgcgt
cacgtagaaagaaccgacttcttccagtctttctttgagaaattgaaacagcacgaagag
attaaagatctccgggccgttgaagacgcctttgtaccggtgataaaattcaaatttgac
gggattgagatcgacttgctttttgccagattggcgcttcagtccatcccagacaacctg
gacctgagaggggactctattctaaaaaacttggacattcgctgcatccgcagcctcaac
ggttgtcgagtaactgatgaaattttgtacttggtgccaaacaaagaaaacttcaggttg
acactgagagccatcaaactttgggccaaacgtcgagggatctattccaacatcctgggc
tttctgggtggagtttcttgggccatgttggtggccaggacctgccagctctaccccaac
gccgtcgctgccacactcgtccacaagttcttcttggtcttctcaaaatgggagtggcca
aatcctgtattgttaaaacagcctgaggacagtaatctgaacttacctgtgtgggatcct
agagtgaatccatctgacaggtaccacctgatgcccatcatcactccagcttacccccag
cagaattccacctacaacgtttccacttcaacacgcaccatcatgactgaggaattcaaa
cacggtctcagtgtcaccgatgagatccttcaaggtaaagcggaatggccgaagctcttt
gagccgcccagctttttccaaaagtacaagcattacattgttcttactgccagtgcatct
acagaagaaaaccacttagaatggatcggactcgtcgagtcaaagatccgcgttctggtt
ggaaaccttgagaggaatgagttcataacactggctcacgtcaactcccagtccttccct
ggtttcaaagagaccaccgaaaacgactttgtttccatgtggttcattggaatcatcttc
aaaaaggtggagaacgcagagagcgttaatattgacctaacgttcgacatccagtccttc
actgacaccgtttataggcaagccaacaacatcaatatgctgaaggacgggatgaagatc
gaagcgacacatgtgaagaagaaacagctgcatcagtacctccctcctgaactggtgcag
agaaagaaacggagcatagcagagttgaaccgtagctccaacagtgaaagctcgaagcgg
atctctctggacggcagtgccctggacagctccagagagacggactcggggacccccttc
agttctcccaacagcaaagcccctccgtctgaaacgaacgaaggagtcagcccccccaag
aagatctttgtagaggactccccaacaccaagcacaaccactgccgccaacgagccgggc
ttgtccatcccggtcatcggctcaaagcctcctggtaaagcgaagcctgcttctcctcct
cctgccagcacctcaaccaccacagtcctgagtgaggatgtgacgcccagcgccaccagc
agtcccaaagaggaacccaacggcctcatcaatggagcccctgccaagagaccacactcc
cccacgcaagaggaggcggccaagagacacaaagatcagccggccttgaatgacgactgt
atatttaaagagccatatcctccatcgtcggaaaccaatccacacggagacgcgccaagt
actcctcctcagcctgaagtaaaagcaaaacccattccaacaatcgatacctcaagaaca
cagagacttcccagcatggagctgccagatgcgtcatcgcccctcccggccagcaacagc
tgtcgtgttgttaaaaattccatcaaactggccctcaaccgcaccaacatgacgcctccc
aaaccccctgtgtttgatggcgcccttactactgaggctcctcccaccagcgaagagaaa
ggcatgtccatccctgtcattggttcaaaacacgcggcgtccaaacacgtgactcccccc
gtcggcagctccatccccactctagtgagcagagttgccgaccccttgaacggagcggcg
tctaagcgaccccactctcccgctctggaggaacaaaccaagaggctgaaagaaacggag
aaagacagaatccacacatcttga
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