Nothobranchius furzeri (turquoise killifish): 107375595
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Entry
107375595 CDS
T05163
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nfu04121
]
107375595 (rnf20)
Enzymes [BR:
nfu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107375595 (rnf20)
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
107375595 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
Bacillus_HBL
zf-RING_2
zf-rbx1
Impact_N
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107375595
NCBI-ProteinID:
XP_015799673
UniProt:
A0A8C6NUZ4
LinkDB
All DBs
Position
sgr01:complement(24214775..24229533)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSGQKRPADPCGSSFSGAPPEKRREREGEDGGPGVSAAAGGSTAVETVIKLGGVSNSEEQ
DIKALQAKNRKLGEALDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDDNIRL
SVRRYDGANGEPEKSPSGEGRSLKPETPEPDGDSNQERAKDRGHQGETSNSFLATLASST
SEEMEAELQERVEKSQKQASHVVEIYKHLKSSVDQLKAELDSGDDGSLKQVTSKLNSLLT
RENELLQQLTEDLKQKHSHMTSESRSLGRAANKADQRVGELQVRIEELQWDMEKIRRREN
RLNAHLSEVLERVNSKGYKVCGEASSVCGTITINKRKFEDMNSELEENTELAENRSVELQ
KLQQDLQNVQQENNNMKTELLSRAEGFVKETSEYRCLQSQFSVLYNESLILKAQLDETRA
RLNTTRTARLRQLDHMENDEVALQRKVRTEVFQLEDTLAQVKKEYEMLRIEFEQTLAANE
QAGPINREMRHLISTLQTHNQQLKGEVVKYKLRLREAQSELNQLRASKGSAILQSQSSTE
MDVKEETTSPSTAAVSAEPAVKTELDNDSAPGGTSALVKMESGVEPEVNVKEEEEKKEKE
EKKEVIVKKEEKEREREKEKEKNRERPTRSSSSSIVMKEEKEKPGSSSQPEEVSGDRLAV
VGGSKRKEVEQLKIVRAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEA
EELRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDV
TGQAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQ
VDAQLQVVRKLEEKERLLQGTISTAERELTLRTQALDMNKRKAQESALLSEELRAQLEQV
QQKLKLVREEVVENSISREKESFNARRAQEDISKLRSKIEKAKKPAEKISNGDDILNEEI
SEYKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIY
IG
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagaaacgtcccgctgacccctgcggatcgtcgttctccggagccccgcct
gagaagcggagggagcgcgaaggagaggacggaggtcccggtgtcagcgccgcggccggt
ggtagcacagcggtggaaacggtcatcaaactgggaggagtgtccaactccgaagaacaa
gacatcaaggctctccaagcaaagaaccgcaagttaggtgaagctctagatcaaagacag
gtgattgaggatgagctgcgagagcgaattgagagactggagacccggcaggccactgat
gatgccagtctgctcatccttaacagatactggaaccagtttgatgacaatattcggctc
tccgtcaggcgctatgatggagcaaacggcgaaccagagaaatcaccctcaggtgagggt
cggagcctgaagccagaaaccccagaacctgatggagactccaaccaggagagggccaaa
gaccgaggtcatcaaggagagacctccaactccttcctggccacactggcgagcagcacc
agtgaggagatggaggcagagctccaggagagagtggagaagagccagaagcaggccagt
catgttgtggagatctacaaacatctgaagagcagcgtggaccagctcaaggcagagctg
gactctggagatgatgggagtttgaagcaggtcacctccaaactgaattccctcctgaca
cgtgaaaacgagctgctgcaacagctgactgaagacctgaagcagaaacacagtcacatg
accagcgagtcgcggtctctgggtcgggcagcgaacaaagcggatcagcgcgtcggcgag
cttcaggttcggatcgaggagctccagtgggacatggagaagatccgtcgccgagagaac
agactgaacgcacacctgagcgaggtcctggagagggtgaacagtaaaggctataaggtg
tgtggagaggccagcagtgtgtgtggaaccatcactattaacaagagaaagtttgaggac
atgaacagtgagctggaggagaacacggagctggcagaaaatcgctctgttgagctgcag
aagctgcagcaggacctgcaaaatgtccaacaggagaacaacaacatgaagacggagctg
ctgagtcgagctgaaggtttcgttaaagagacctcagagtatcgctgccttcagtcccag
ttctctgtgctttacaacgagtccctgatcctcaaagctcagttagatgagacacgcgct
cgcctcaacaccacccggacggcacggcttcggcagctggaccacatggagaacgatgag
gtggctctgcagaggaaagtacgcaccgaggtgtttcagctggaggacacactggctcag
gtgaagaaggagtacgagatgctgcgcatcgagtttgaacagactctcgcagccaatgag
caagcaggtcccatcaacagagagatgcgtcacctgatcagcacgctgcaaacacacaac
cagcagctgaagggggaggtggtgaagtacaagctgagactacgagaggctcaatctgag
ctcaaccagcttcgtgcttcaaagggaagcgccatcctccaatcacagtccagcacagag
atggatgtgaaggaggagacgacctctccgtcaaccgcggctgtttctgcggaacctgcc
gtgaagacagaactggacaatgactcggcgcccggcggcaccagtgctttggtcaaaatg
gagtctggcgtagaaccagaggtgaacgtgaaggaggaagaggagaaaaaagagaaggag
gaaaagaaagaggtgattgtaaagaaagaagagaaggaacgggagcgagagaaagagaag
gaaaagaacagagagaggcccacccggagcagcagcagcagcatcgtcatgaaggaggag
aaggagaagccggggagcagcagccaaccggaggaggtcagcggggatcggctggctgtg
gtcggagggtcaaagaggaaggaagtggagcagctgaaaatcgtccgagcagaactcaag
aaagcccaggagtcccagagggagatgaagctgctgctggacatgtaccggtcagcaccg
aaggagcagcgggacaaagttcagctcatggctgcagagaagaagaccaagtcagaggct
gaggagctgcgacagaggctgcgggagctggaggagagggagaggagggagggcaagaaa
atggccgatgaagaggctctacggaagattcgctctgtggaggagcagatagacatcctc
aacaagaagctgtccatagccaaacaggaagaggacgccctgctgagcgagatggacgtg
acgggccaggcttttgaggacatgcaggaacagaacattcgtctcatgcagcagctgcgg
gaaaaagacgatgccaactttaagctgatgagcgagcggatcaagtccaaccagatccac
aagcttctgaaagaggagaaggaggagctggctgatcagctcctcaccttaaaaactcag
gtggacgcacagctgcaggttgtgaggaagctggaggagaaggagcgcctcctgcagggc
accatcagcactgcagagagagagctgacgcttcgaacgcaagctttagacatgaacaaa
cgcaaggctcaggagtcggcgctgctgtcagaagagctacgggctcagctggagcaggtc
cagcagaagctcaaactggtcagagaggaggtggttgagaacagcatctccagggaaaag
gagtccttcaatgcccggcgagctcaggaggacatctctaaactgaggagtaagatagag
aaggccaagaaaccagctgagaaaatcagcaacggagatgacatcctgaatgaagagatt
agtgaatacaaggctcgtctaacgtgtccgtgctgcaactcccgtgtgaaggacgctgtc
ctgacaaagtgcttccacgtcttctgcttcgagtgcgtcaagacgcgctacgacacccgc
cagaggaagtgcccgaaatgcaacgctgcttttggagcaaacgacttccatcgcatttac
atcggctaa
DBGET
integrated database retrieval system
