Nothobranchius furzeri (turquoise killifish): 107375740
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Entry
107375740 CDS
T05163
Symbol
thbs2
Name
(RefSeq) thrombospondin-2 isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04145
Phagosome
nfu04510
Focal adhesion
nfu04512
ECM-receptor interaction
nfu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107375740 (thbs2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107375740 (thbs2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
107375740 (thbs2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107375740 (thbs2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107375740 (thbs2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nfu04147
]
107375740 (thbs2)
00536 Glycosaminoglycan binding proteins [BR:
nfu00536
]
107375740 (thbs2)
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Phagocytosis
Opsonins
107375740 (thbs2)
Exosome [BR:
nfu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107375740 (thbs2)
Exosomal proteins of colorectal cancer cells
107375740 (thbs2)
Exosomal proteins of bladder cancer cells
107375740 (thbs2)
Glycosaminoglycan binding proteins [BR:
nfu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107375740 (thbs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
TSP1_CCN
cEGF
Laminin_G_3
EGF
Motif
Other DBs
NCBI-GeneID:
107375740
NCBI-ProteinID:
XP_015799926
UniProt:
A0A9D2YGG2
LinkDB
All DBs
Position
sgr03:complement(18829274..18850656)
Genome browser
AA seq
1184 aa
AA seq
DB search
MILRSSLFLLLLSTFHQVAPQDGEQEDEMSFDLFEISHITRKTLGAKQFRGQNLDAPAYR
FIRFDHLPPVSTPILKQILRQIQNNEGFVFVASIRQDRGSRGTLIGLDGPDGRRQFEIVS
DGRANTLDLVYWVDGSRNVFSFEDVDLSDSQWKNVTLHIHGENANLFVGCSLIDSFILDE
PFYENLRAEGSRMFVAKGSTRESHFRGLLQNVHFLFDTSMEDILLSRDCEVEKQDTDNIV
SESTEIVDVRPSTTTNIIGQKTDDLGTDMCERSCEELSTMFQELKGLRVVVSNLIDGLQK
VTEENTVMKEALGRMKDSKEKNMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVACASPSLIDGECCPVCMPKDSEDGWSPWSEWTECTVTCGIGTQQRGRSCDATSNPCSG
PSIQTRKCSLGRCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNAPVPQLGGKDCA
GSGRETQKCIAEPCPIDGAWGPWSPWATCSATCGGGVKSRSRECNSPRPQYGGKKCIGEP
NDSDSCNKEDCPIDGCLFNPCFGGVDCSSSPDGSWECGPCPAGFRGNGTHCEDINECDMV
SDVCYKVSGTQRCVNTDPGFHCLPCPKRYKGTQPYGMGIEAAKRNKQVCEPENPCKEKTH
SCHKYAECIYISHFSDPMYKCECRTGYAGDGFICGEDSDLDGWPNQNLVCDANATYHCKK
DNCPNLPNSGQEDFDKDGQGDACDKDDDNDGILDDRDNCPLLYNPRQFDFDKDDVGDRCD
NCPYEHNPAQIDTDHNGEGDACAVDIDGDEILNENDNCPYVYNTDQKDTDMDGVGDQCDN
CPLLHNPDQTDVDNDLVGDQCDNNQDIDEDGYQNNLDNCPYVANANQADHDKDGKGDACD
YDDDNDGIPDEKDNCRLTPNEDQLDSDGDGRGDACKDDFDNDNIPDILDVCPENNAISVT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTMYVN
TDRDDDYAGFVFGYQSSGRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNSTTGTGEN
LRNALWHTGNTAGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDKTFAGGRLGLFVFSQELVFFSDLKYECRDKPQFPEVFTR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggagcagtctcttcttgttgctcttatctacattccatcaagtagcaccc
caagatggagagcaggaggatgagatgtcatttgacttgtttgaaataagccacatcaca
cgcaagactctgggagccaagcagttccggggccagaacctagatgccccagcctaccgc
ttcatacgcttcgaccacctgcctccagtcagcacccctatacttaaacaaatcctacga
cagatccaaaacaacgaaggcttcgtgtttgtcgccagcatccgccaggatcgaggctct
cgtggcaccctgatcggtctggacggccctgatggtcgaaggcagtttgagatcgtatct
gacggacgagccaacaccctggatctggtgtactgggtggacggctcgaggaacgtattc
tcgtttgaggatgtggacctgtcagactctcagtggaagaatgtcacccttcacatccac
ggggagaatgcaaacctgtttgtgggctgcagcctgatcgacagcttcatcttggacgag
cctttctatgaaaatctgcgagcggagggaagccggatgtttgtggcaaagggatccaca
cgggagagccactttaggggccttcttcagaatgtgcatttcctcttcgacacctcaatg
gaagacatcctcctgagcagagactgtgaggttgagaaacaagacactgacaatattgtg
agcgagagcacagagattgtagatgtgaggccttccaccactacaaacatcataggtcag
aagacagatgacctgggcacagatatgtgtgaacgctcatgtgaggaacttagcaccatg
ttccaggagctcaaaggcctgcgtgtcgttgttagcaatcttattgacggcttgcaaaaa
gtgacagaggagaacacagtcatgaaggaggccctggggagaatgaaggactcaaaggag
aaaaacatgtgctggcaggatggacgtctgttcgaagacaaggaggactgggttgtagac
agctgcaccaaatgtacctgccaggagtccaagattgtgtgccatcagattacgtgtcca
cctgtggcttgtgccagcccttcgttaatagatggagagtgctgccctgtgtgcatgcct
aaagacagcgaggatggctggtccccttggtcagaatggaccgaatgcacagtcacttgt
gggataggaactcagcagaggggccggtcatgtgatgcaaccagcaacccctgcagcgga
ccttctatccagacccgaaaatgtagcctgggcaggtgcgacagccgggtccgccaagat
ggagggtggagtttatggtcaccatggtcgtcttgctctgtgacgtgtggagaaggacag
atcaccagaatacgacactgcaatgctcctgtgccccagctggggggcaaagactgcgcg
ggaagtggaagagagactcagaagtgcatcgccgaaccgtgtccaattgatggtgcttgg
ggcccctggtctccctgggcaacttgttctgcgacatgtggaggaggggtcaaaagtcgt
tcacgggagtgtaacagccctcgacctcagtatggtgggaagaagtgtattggggagcct
aatgacagtgacagctgtaacaaggaggattgccccatcgatggctgcctgtttaaccct
tgctttggtggagttgactgcagcagctccccagatggatcttgggagtgtggcccatgt
cctgctggtttccgtggaaatggtacccactgtgaggatatcaatgagtgtgacatggtg
tctgatgtttgctataaagtgagtggaacgcagcgatgcgtcaacactgatccaggtttc
cactgtctgccctgtccgaagcgttacaaaggcacacagccttatgggatggggattgaa
gcagccaagaggaacaaacaagtatgtgaaccagagaacccatgtaaagaaaaaactcac
agctgtcacaaatatgccgaatgcatctacatcagccacttcagcgacccaatgtacaag
tgtgagtgtcgcactggctatgctggagatggcttcatttgtggtgaagactcagatttg
gatgggtggcccaatcagaaccttgtgtgcgatgccaatgctacttatcactgtaaaaag
gataactgccccaatctaccaaactctgggcaagaagactttgacaaagatggtcaagga
gatgcttgtgataaagatgatgataatgatggaattctggatgatagggacaactgtccc
cttttgtacaatcctcgccagtttgactttgataaagacgatgttggtgatcgttgtgac
aactgtccttatgagcacaaccctgctcaaatagacacagaccacaacggtgaaggcgat
gcctgtgcggtggatattgatggagatgaaattcttaatgagaatgacaactgtccctat
gtgtacaacactgaccagaaggacacagacatggatggagtcggtgaccaatgtgacaat
tgtcccttgcttcacaacccagaccagactgacgtggacaatgacctggttggagatcag
tgtgataataaccaggacattgatgaagacggttatcaaaacaacttagacaactgccct
tatgtggccaatgccaaccaggcagaccatgacaaggatgggaaaggagatgcgtgtgac
tatgacgatgacaatgatggtatacctgatgagaaggacaactgcagattgacacccaat
gaagaccagttggattctgatggtgatggaagaggggacgcatgcaaagatgattttgat
aacgacaacatcccagatatccttgatgtgtgtccagagaacaatgccattagtgtgacc
gatttcaggaagttccagatggtccacttggatcctaaaggaaccactcaaattgatccc
aactgggtggtcagacatcagggcaaagagttagttcagacagccaactctgacccaggc
atcgcagtaggttttgacgagttcaatgctgtggacttcagtgggacgatgtatgtgaac
acggacagagatgatgactatgctggctttgtgtttgggtatcagtccagcggacgcttt
tacgtggtaatgtggaagcagattacacagacttactgggaggacaagccctccaaagct
tttggtatctcaggtgtctcactcaaagttgtcaactcaactacgggaaccggagagaat
ctccgaaatgctttatggcacacgggcaacaccgcagggcaggtgcgcactctgtggcac
gaccccaagaatattggttggaaggattacacagcttacaggtggcatctcatccataga
ccgaaaactggttttataagggttgtggtctatgaagggaaacagatcatggctgactcg
ggacctgtttatgataaaacatttgctggaggcaggttaggtttgttcgtcttctcacaa
gagctggtcttcttctccgacctcaagtatgaatgtagagataagccgcagtttccagaa
gtgttcacaagataa
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integrated database retrieval system
