Nothobranchius furzeri (turquoise killifish): 107375779
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Entry
107375779 CDS
T05163
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107375779
04121 Ubiquitin system [BR:
nfu04121
]
107375779
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
107375779
Ubiquitin system [BR:
nfu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107375779
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZBED1_RNase-like_helical
ZBED1_RNase-like
zf-BED
ATP-synt_D
DUF7896
Microp_apicomplexa
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
107375779
NCBI-ProteinID:
XP_015800023
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All DBs
Position
sgr03:complement(<21697397..21699383)
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AA seq
543 aa
AA seq
DB search
MAAASAVPEIEPPPPSFRSAVWNFFGFHVKRDPDGKRVVDKTTTVCRRCHTMLNYVSGNT
TNMTVHLRRHHPDAKTSGVREKQQQPSKQQALPESFRQPFTRDSKRAKEIDRAIATFIAV
DMRPFSVVDNIGFREMLRVLEPRYNLPSRTYFTETAVPALYNETKAKLETGVSAAPAVAL
TSDGWTSRATQSFLTVTAHYIDPEWQMKSSVLQTRLIESHATNDLAKALSEAVEDWKLVR
AKGTIPVTTDNVRNIVNAVTAAGLGPQIGCFAHTINIAAQKGMAVSKVSHLLAKMRKIVT
FFHRSTTGHNVLKRKQELLQLGEKKLIQDVSTRWNSTHDMMERYLEQKDAVFAAMADNTV
KKNMKNINSLSDDEHTLAENLVAVMKTLKTVTIMMCEASSPTASMIMPLKISILNSMVQS
DDDSPTVRDVKKNIRDDLEQRYTDPAIQHYLHKCTALDPRFKSLRHLDDATQLRIFAALN
TEIVLSIEEGQAAGNTTTAPSTDNEASHFRFTIIISTREEVSHEGVVWRTVHGTGAKDQM
FNS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcctcagcggtccccgagattgaacctcctcccccgtctttcagatctgca
gtttggaacttttttggctttcatgtgaagcgtgaccctgatggtaagcgcgtcgtggac
aaaactaccacagtatgtcggagatgccacacaatgcttaattacgtcagcgggaacaca
acaaatatgactgtacatttacgccgacatcaccctgatgcaaagacaagtggagtcagg
gaaaaacagcaacaaccaagcaagcaacaagctcttcccgagtcatttagacagccgttt
acacgtgattccaagagggcaaaagaaatagacagggcgatagctacttttattgctgtc
gacatgcgaccgttttctgtagtagacaacatcgggtttcgggagatgctgagagtactt
gagccccgttacaatcttccttcacgaacctatttcaccgagaccgcagttcctgctttg
tacaatgagacgaaagccaaattagagacgggagtgtcagcagcacccgctgttgctctg
acctcagacggctggacgtcaagagctacacagagcttcctgactgtcaccgcacattat
attgatccagaatggcaaatgaaaagcagtgttctgcagacacgcctcatcgaaagtcac
gccacaaacgacttggccaaagctctgtcagaagcagtggaagactggaagttagtgcga
gcaaaaggtactatacctgtaactactgacaacgtcaggaacatagttaatgctgtcaca
gctgctgggctggggccacaaattggatgctttgcacataccattaatatagcagctcag
aaaggaatggcagtgtcgaaagtgtcccatctccttgcaaagatgagaaaaatagtcaca
ttttttcacagaagcacaacaggacacaatgtgttgaagagaaaacaggagctgctacag
cttggtgaaaaaaaactgatccaagatgtttcaaccaggtggaactccacccatgacatg
atggaaagataccttgaacagaaagatgcagtgtttgctgctatggctgacaacactgtg
aagaagaacatgaagaacataaacagtctatctgatgatgaacacacactggctgaaaat
cttgttgcagtcatgaaaaccctaaaaactgtcactatcatgatgtgtgaagcatcatct
cccacagcatccatgatcatgccacttaaaataagcatactgaactccatggtacagtct
gatgatgacagcccaacagtgagagatgtaaaaaaaaacatcagggatgacctggagcag
agatacacagatcctgccattcagcattacctccacaagtgcacggctttagatccacgc
ttcaagtccctgcgacacttggatgatgccactcagctgagaatttttgcagcactcaac
acagagattgtcctgagcattgaagaaggtcaagctgcaggcaacacaacaacagccccc
tctacggataatgaagcatcacacttcagattcaccatcatcatctccaccagagaagaa
gtcagccatgaaggagttgtttggagaactgttcatgggacaggagccaaggaccagatg
ttcaacagctga
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