Nothobranchius furzeri (turquoise killifish): 107375857
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Entry
107375857 CDS
T05163
Symbol
ccdc88a
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nfu03037
]
107375857 (ccdc88a)
Cilium and associated proteins [BR:
nfu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
107375857 (ccdc88a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
KASH_CCD
DUF4472
Rab11-FIP3
APC_N_CC
Motif
Other DBs
NCBI-GeneID:
107375857
NCBI-ProteinID:
XP_015800122
UniProt:
A0A9D3BUT6
LinkDB
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Position
sgr03:27714196..27795109
Genome browser
AA seq
2033 aa
AA seq
DB search
MENEVFTPLLEQFMLTPLVCWVKTVGRSTVSDGSKLSEYMELVDGIYLNEFMLEINPKAT
VQRTNKKVNNDPTLRIQNLSILIRQIKAYYQESLQQLVMMPLPNILVLGRNPLCEQGLHE
MKKLLLLLLGCAVQCEKKEEYIELIQVLDFDIKASIASHIQEVTHNQENVVDLQWLESGD
LPSEDLDSLSRNLAFHLKRLVDERDTQLETIVELTQERDCVQLSPLAPGATHSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENVEVELKRLQQESFQLLS
DARSARAYRDELDALREKAIRVDKLESELGRYKERLHDIEFYKARVEELKEDNQILLETK
AMLEEQLDASRTRSDKLHLLEKENLQLKSKIHDLEMDRDLDRKRVEDLLEENLVLEMAQK
RSMDESLHLGWELEQLSKTPELTDVPQKSLGEEVNELTSSRLLKLEKENQVLLKSVEELR
GTASQDTKGQMTKLDQENQKLNQKLEQLESELTADKELLRSAESLSTDLMKEKALLEKTL
ETLRENSERQLKGLEQENKHLSQTLSSLRQRCQVGAEARVKDVEKENRVLHESICETTAK
LNKMEFERKQLRKELEVMKEKGERAEELELQLQKLERENESLQKKVTSLGITCEKVSSLE
KENSELEVEGRRLKKKLDSLKNTAFQLEALEKENSQLEQENLELRRSAESQRSVGAKAAQ
LEAENRELESERTQLKRSLELLKASSKKTERLEVSYQGLDTENQRLQKALENSSKKIQQL
EAELQEVETENQTLQRSLEELKISSKRLEQLEQENKSLEQESSLLEKDKKLLEKENKRLR
QQAEIRDSKLDDSNQRISALEKENRTMGKEMIFFRDSCTRVKDLEKENKELVKQASIDKK
TLMTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPKG
GENSDAVSKWEKESHEATRELLKVKDRLIEVERNNATLQAEKVALRSQLKQLETQSSNLQ
AQIVAVQRQTASLQENNTTLQTQNAKLQVENSTLSSRSAALMAQNAQLQTQQSSVEGERE
GALKEKEELRATYELLLRDHEKLAALHERQAVEYEALIGKHGGLKTSHKSLEQQHRDLED
KYKQLLQRKGELEELEKNLKKQQEKMEQENQSHKATADQCKQLKEENDRLNTSYRQLVQD
NESLQLDHKNIKSQLNSAKLEQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMKKLIKPKSRERMRSLTLTPSRSEFGDVFLPFPQDSQDSSS
IGSGSNSLDDPLTQKRSSRRRGQQCHAQVQGSSNAIKRLPFMRNRSKDKDTAKAIYRRSM
SMNDLLQTMAVAGVPGSEWTGSTDGLDGPEAGDASVVGSSRYSSNRRVKELALSTDAIDC
AVLSLPSSGQSRTKHRLQMKDNTCCEDVAGSSDDPKSQGLQGSSRALALCPVQMRAMCRV
PCSICTSRPSSLHSNRTTSSNSNNNSHLASPLEGKGTLNGRLSRPQSESSGEFSLSLDQE
VWSSSGSSPVQLPTSSRSSHQSPLQLRRSLEPSSASGSSGQMQLRKTGSPSEVLSLQQFL
DEGIDPAESGSQENLTVDSPRLSTSSEHTQKERPSKGRGILRSSSGKATIGSIDRAPRSL
GQPGRPTLKKAESTRVKGSAPARTSLSSQAKAISVSERLDSTSSTLPRASSVISTAEGTT
WRTSIHDLLSKDHRQPVSVDASPHVPSPKAEVRSRPTPSEYHPNSTHLKEALCTTSPMPK
SLSLPCGSLEDPDLTTLESFLGPSFTVESVFMDSIFSESAENLPFLSLNPTLVSNISGPP
FTDKPLPPPHSQPSDLLRSGLKEPNDGADPNNANVSDLSPEENQSLWYEYGCV
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaggttttcaccccattactggagcagttcatgctcacccctctggtctgc
tgggtgaagaccgtcgggcggtcgacagtgagcgatggcagtaaattatcggaatatatg
gaattagtggatgggatttacctgaacgagttcatgctggagataaaccctaaagccacc
gtgcagaggaccaacaagaaggtgaacaatgaccccacactacgtatccagaacctgtct
atccttatcaggcagatcaaagcctactatcaggagagcctccagcagctagtgatgatg
cctctaccgaatattctggtgctgggccgaaaccctctctgtgaacaaggtctgcatgag
atgaagaaactgttgttgctgcttttaggatgtgctgtccagtgtgagaagaaggaagaa
tacatcgagctaatccaggttctggactttgacatcaaagcttccatagcatcccacatc
caagaggtgactcataaccaggagaatgtggtggacctgcagtggttagaaagtggagac
ctgccttctgaggatctggatagtctgtccaggaacttggctttccacctcaaacgcctg
gtggatgaaagggacacacagctggagaccatcgtggagctgacccaggagagggactgt
gtgcagctgtctcctctggctcccggtgccacccattctccaggtgactcccccagcatg
aggaggactgaaagtcgacaacacctctctgtggagctggctgatgccaaggccaaaatc
agacgcctccgacaggaactagaggagaagagtgagcagcttctggacaccaggcaggag
ctggagaacgtggaggtggaactgaagaggcttcagcaggagagtttccagctgctgtca
gatgctcggtcagctcgggcctaccgcgacgagctggacgctctcagagaaaaagccata
cgtgtcgacaagctggagagcgagctcggccgatacaaggagagacttcatgatattgag
ttttacaaagccagagtggaggagctaaaggaggacaatcagattctgttggagactaaa
gccatgctggaggagcagctggatgccagcaggacccggtccgacaaactgcacctcctg
gagaaagagaacctgcagctcaagtcaaagatccacgatctagagatggaccgggacttg
gaccgtaaacgtgtggaggacctgttggaggagaatcttgtgttggaaatggcccagaaa
cggagcatggatgagtccctgcatttgggctgggagctggagcagctgtcaaagactccg
gagctgactgatgtcccgcagaagtctttgggcgaggaggtgaacgagttgacctcgagt
cgcctgctgaaactggagaaagaaaaccaggtgctgctgaagtctgtggaggagctcaga
gggacagccagtcaggataccaaaggacaaatgaccaaactcgaccaagaaaaccagaaa
cttaaccagaaattggagcagctggagagtgagctgacggcagacaaagagttgctccga
agtgccgagtctttaagtacggatctgatgaaggaaaaggctttgttagagaaaactctg
gagacactccgggaaaactcagagagacagctgaaaggtctggagcaggagaacaagcac
ctgagccaaacgttatcatccctgcgtcagcgctgccaggtgggagctgaggcccgcgtg
aaggacgtggagaaggaaaaccgcgttcttcacgaatccatctgtgaaacaaccgccaag
ctaaacaagatggagtttgaaaggaagcaactccgtaaggagcttgaagtgatgaaggaa
aaaggtgagagagcagaagagttggagcttcagctacagaagctggagcgagaaaacgaa
agcctgcagaagaaagtcaccagtcttggaatcacctgtgagaaggtgtcatctttagag
aaagagaactctgaactggaggtggaaggtcggcgtctgaagaagaaactggattcttta
aagaatacagccttccagctagaagctttagaaaaggagaactcccagctagagcaggag
aacctggagcttcggcgttcagctgagagtcagcggtcagtaggggccaaggccgctcag
ctggaagccgagaaccgggagctggagagtgagaggacgcagctgaagcgaagcctggag
ctgcttaaagcatcgtccaagaagacagaaagattggaggtgagctaccagggtctcgac
acagagaaccaacgcctgcagaaagctttagagaacagcagcaagaagatccagcagctt
gaggcagagctgcaggaagtggaaacggagaatcaaacactccaaaggagcctggaggag
ctcaagatctccagtaaacgtctggagcagctggagcaggagaacaagtctttggagcag
gaaagttctttgttagaaaaggacaagaagcttctagagaaggaaaacaagcggctgagg
cagcaggcggagatccgcgactccaagttggacgacagcaaccagcgaatctctgccctg
gagaaggagaaccgcaccatgggcaaggagatgatcttcttcagggactcctgcacaaga
gtcaaagacctggagaaggaaaacaaggagctggtcaaacaggccagtattgataagaag
accctgatgacgctccgggaggagctcgtgagtgagaaactgcggactcagcagatgaat
aatgatttagagaaactgactcatgaactggagaagattggactgaacaaggagaggctc
ctccacgatgagagctcggatgacaggtttaaactcctggaaaccaaactggagtcaact
ctgaaatcttctttagagattaaggaggagaaaatcgctgccctagaagcccgactgcag
gagtcctccaacctcaatcagcaactccgtcaggagctgaaaacagtgaaaaagaactat
gaggcacttcggcagagggaggaggaggagaggatggtccagagctcacctccaaaagga
ggagaaaactctgatgctgtcagcaaatgggaaaaagaaagtcacgaagccacaagggag
ctgctgaaggtcaaagaccgattaatagaagttgagagaaataatgccacgcttcaggct
gagaaagtggctctgagaagtcagctcaaacagctggaaacccaaagctccaacctgcag
gctcagatcgtggctgtgcagagacagacggcctcgttgcaggagaacaacaccacgctg
cagacgcagaacgccaaactgcaggtggaaaactcaaccctgagttcccgaagtgctgcg
ctgatggcccagaatgcccagctgcagacccagcagagcagtgtggagggggagcgagaa
ggagcgctgaaagagaaagaagagctgagggcaacttacgaactgctgctccgagatcac
gagaagctggcagcgctccatgagagacaggccgtggagtacgaagccctgattgggaaa
catggcggcctgaagacctcccacaagagcctggagcaacagcacagggacttggaggac
aaatataagcagctcctgcagagaaaaggggaattggaggaactggagaagaacctgaag
aaacagcaggaaaagatggagcaggagaaccagagccacaaagctacagctgaccaatgt
aaacaactcaaagaggagaacgacagactcaacacgtcttatcgtcagctggtgcaggac
aacgagagtctccagctggaccataagaacataaagagccagttgaacagtgcaaagctg
gagcagaccaaactggaggccgagttctccaaactgaaggaacaatatcagcagctggac
atcacctccacaaaactcaccaaccagtgtgaactgttgagccagctaaagggaaacctg
gaggaggagaaccgtcacctgttggaccagatccagaccctgatgctgcagaaccgcaca
cttctggagcagaccatggaaagcaaggacctgttccacgtagagcaaagacaatacata
gacaaactgaacgagctgaggaggcaaaaggaaaagctggaggaaaaaatcatggaccag
tacaaattctacgacccgtcacccccacgcaggcgtgggaactggatcaccctgaagatg
aagaagctgatcaagccaaagagccgagagaggatgcgttctctcacgctgactccgtct
cggtccgagttcggagacgttttcttgccgttccctcaggacagccaggacagctcttct
ataggctctggctccaactcgctggatgacccgctcacgcagaagaggagcagcaggagg
agagggcagcagtgccatgcccaagtgcagggctcctccaatgccataaaaaggttgcct
ttcatgaggaacagatccaaggacaaagacacggccaaggccatctaccgacgctctatg
tccatgaatgacctgctgcagacgatggcggtggcgggtgttccagggtcagagtggacg
ggtagcacggatggtctggacggacctgaggctggagatgctagcgtggtgggcagcagc
agatatagtagtaatcggcgcgtgaaggaactcgccttatccaccgacgccatcgactgt
gccgtcctgagcctccccagctctgggcagagcagaaccaagcaccggcttcagatgaaa
gacaacacttgctgtgaggatgttgcaggctcctcagatgatcccaagagtcaagggctg
caggggtctagcagagcacttgctctgtgtcctgttcagatgagagctatgtgcagagtc
ccctgtagcatttgtacctccagaccctccagtctccatagcaacaggaccaccagtagc
aatagtaacaacaactcccatctcgcttctcctctggagggcaaaggcacactgaacggc
aggctcagcagacctcagagtgagagcagtggagagtttagcctaagtttggaccaggag
gtgtggtccagcagcggtagcagccctgtccagctgcccacgtcctcccgatcctcccac
cagagccccctccagctgcgcaggtccctcgagccatccagcgcctcaggcagctcaggt
cagatgcagctcaggaagacaggatcccctagtgaggtgctttctctgcagcagttcctg
gatgagggtattgatcctgctgagtctggcagtcaggagaacctcacagtggactcgcct
cgcctctccacttcctctgagcacacgcagaaagaacgcccctctaagggccgtggcata
ttacgctcgtccagcggtaaagcaaccattggcagcatcgaccgggccccgagatctctg
ggacaacccggccgcccgaccctaaaaaaggctgagagtacccgtgtgaaaggctcagcc
ccagcgcgaaccagcctgtcctcgcaggctaaagccatatcagtctctgagcgcctggac
tcgacctcctccactctgcctcgggctagcagtgtcatctccaccgctgaaggaacaaca
tggcgcaccagcatccatgacctgctgtccaaagaccaccggcagcccgtatcggttgat
gcgtctcctcacgtcccttcccccaaggctgaagtccgctcacgcccaacacccagtgag
taccaccccaacagcacgcacctaaaggaagccctctgcaccacctcccccatgcccaaa
tcactcagcttaccctgtggtagcttagaggatccagacctcaccaccctcgagtctttc
ctcggcccctccttcactgtagagtcggtgttcatggactccatttttagcgagtcagca
gaaaacctccctttcctgtccctaaaccccaccctagtcagcaacatcagtgggcctcct
ttcacagataagcccctccctcctcctcacagccagcctagtgacctgttaagatctggc
ctgaaagagccgaatgatggtgccgatccaaacaatgcgaatgtttcggacctgagccca
gaggagaaccagtctctgtggtacgagtacggctgtgtgtga
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integrated database retrieval system
