Nothobranchius furzeri (turquoise killifish): 107375961
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Entry
107375961 CDS
T05163
Symbol
dis3
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107375961 (dis3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107375961 (dis3)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107375961 (dis3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
Rrp44_S1
CSD2
OB_HELZ2
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
107375961
NCBI-ProteinID:
XP_015800299
UniProt:
A0A8C6Q5R5
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All DBs
Position
sgr03:complement(33577288..33583684)
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AA seq
950 aa
AA seq
DB search
MLKSKTFVKKTRSGGVMKVVREHYLRDDIWCGSETCTECKQDSPVLQKDVCVESNLCSYP
HYLVPDTNVVLHQIDVLENPVIRNVIILQTVLQEVRHRSAPVHKRLKDIIHEKEKHFYTF
TNEHHRETFIERQPGESANDRNDRAIRVAVKWYSKHLKTLESGPDGLKVVLLTNDLGNKQ
KAEENGMVAFKFEEYIKSLLANPELVDLLALSNDDKNEITSSKVLFPEHLPLSRIQVGIK
SGSYLQGTFRASRDNYLEATVFVQGDGEDSTEVLIQGLQNLNRAVHQDVVAVQLLPRNQW
LAPSSVVLQDDGVAKDDDVEEDEEEKLRLSAAEAARKPTGKVVGIIKRNWRPFCGMLNVS
QIKESTRHLFTPADRRVPRIRIETRQASTLAGQRIMVAIDGWPKNSRYPNGHFVRSLGGA
GEKETEQEVLLLEHDVPHQAFSQAVLSFLPKMPWAITPEDMAKREDLRHLTVCSVDPPGC
TDIDDALHCRELENGNFEVGVHIADVSHFIRPGNALDKEAANRGTTVYLCGKRIDMVPEL
LSSNLCSLRSNVERLAFSCIWEINHKAEILKTRFTKSVINSKASLTYAEAQMRIDDTNKT
DDITQSLRGLNKLAKILKRQRIENGALTLSSLEVRFHMDSETHDPIDLQTKELMETNSMV
EEFMLLANISVAQKIYDEFSECALLRKHPAPPPSNYDVLIKAAKSKNVEIHVDSAKALAD
SLDGAKVESFSYFNTLLRILATRCMMQAVYFCSGMDSDFHHYGLASPIYTHFTSPIRRYS
DIIVHRLLAVAIGADSTYPDLMDKHKQSALCNNLNYRHKMAQYAQRASVTFHTQLFFKSR
GMLNEEGFVLFVRKNAIIVLIPKFGLEGTVFFDTKDKVSPSLVYDEEGPTLKVEQHTFHI
FDRVKVTIGLDDSNIQHQKIRMALTEPSIPGVSVPAPEAEPPTKKQKLDR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtcgaagaccttcgtgaagaagacccggtcgggtggagtaatgaaggttgtg
cgtgagcattacctcagagatgatatttggtgtggtagtgaaacttgtactgaatgcaaa
caggactccccggtgctacaaaaagacgtgtgtgtcgagagcaacctgtgctcctatcca
cactatttggtccctgacacgaatgttgtgttacatcagatcgacgtgttagaaaatcct
gtgattcgtaacgtgattattcttcagaccgtactgcaggaggttcgccaccgcagtgca
cctgtccacaaacgcctgaaggacatcatccatgaaaaggagaaacacttctacactttc
accaatgaacaccacagagagacattcattgaacgccaaccaggggagagcgccaatgat
cgcaacgatcgtgcgatccgtgtggcagtgaagtggtacagcaaacacctgaaaacgctc
gagtcgggcccagatggtctcaaagtggtcctcctcaccaacgatctagggaacaagcag
aaagcggaggagaatggcatggtcgctttcaaatttgaagaatacatcaagagtcttctc
gcgaatcctgagcttgtggatcttctggctttgtccaatgacgataagaatgagatcaca
agcagtaaggttttgtttccagagcaccttcctctttccaggatccaggtaggaatcaaa
agcggctcctaccttcagggcaccttcagggccagcagggacaactacctggaggctact
gtttttgtccaaggagacggagaggacagcacagaggttctcatccagggtcttcaaaac
ctcaacagggctgtgcaccaggatgtggttgctgtgcagctgttgccacggaatcagtgg
ttggcgccttcatcggtcgtcctgcaggatgacggcgtggcaaaggatgatgatgttgaa
gaggatgaggaggagaaattgaggctatcagctgccgaggcggccaggaaacccacagga
aaggtggtgggaatcatcaaaaggaactggagacctttctgtggaatgctgaatgtgtcc
caaatcaaagagtctacccgccaccttttcaccccggcagaccgccgtgttccacgcatt
cgcatcgaaacaagacaggcttccacgcttgcaggccaaaggatcatggtggccattgat
ggctggcccaaaaactccagatatccaaatggtcactttgtccgcagtttgggaggtgca
ggggagaaggagacagagcaggaggtgctgcttctggagcacgacgttccacatcaggct
ttctcccaggccgttctcagttttcttcccaagatgccttgggccatcacaccagaggac
atggcgaagcgagaggacctgagacatttaactgtgtgcagtgtggatcctccaggatgt
acggatatcgatgacgctctgcactgtagggagctggaaaatggaaactttgaggtgggg
gttcacatcgctgatgtcagtcacttcatcagacctggtaatgcactggacaaagaggcc
gccaaccggggtacaacagtgtacttgtgtggaaaaaggatagacatggttcccgagctg
ctcagctccaatctgtgttcgctacgctctaatgtggagagactcgccttttcatgcatt
tgggaaataaaccacaaggcagaaattttaaagactcggttcacaaaaagcgtcatcaac
tccaaggcctctctgacgtatgctgaggcccagatgaggatagatgacaccaacaagact
gatgacatcacccaaagtttaagagggctcaacaaactcgccaaaatcctcaagaggcag
aggatagagaacggggcactgacgctttcttccttagaggtccggttccacatggacagt
gaaacccatgacccgatagacctgcaaacgaaagaactgatggagacaaactctatggtt
gaggagttcatgttgctggccaatatttcagttgcacagaagatttatgatgagttttca
gaatgcgctctgctgaggaaacacccggctcctcctccgtctaactacgacgttctgatc
aaggctgcaaagtccaaaaatgtggagatccacgtagattccgccaaggccctagctgat
tccctggatggagccaaagtagagagcttttcctatttcaacacgctgctgcgcatcttg
gccactcgctgcatgatgcaggcagtctacttctgctctggcatggacagcgacttccac
cattatggcctcgcctcacccatttacacgcacttcacatcaccgattaggaggtattca
gatatcatagtgcaccggctgctggcggtggccataggagcggacagcacctacccagat
ttgatggacaaacataaacagtcggctctctgcaacaatctcaactacagacacaaaatg
gctcagtacgctcagagggcgtctgtgaccttccacactcagttgttttttaagagtcga
ggtatgctgaacgaagaaggatttgtcctgtttgtgaggaagaatgccatcatcgttctc
atcccaaagtttggtctggaggggaccgtcttctttgataccaaagacaaagtctcaccc
agcctcgtttatgatgaagagggtcccacgctgaaggtggagcagcatacattccacata
ttcgatcgggtgaaggttacaatcggccttgacgactccaacattcagcaccagaagatc
cgcatggctctgacagaaccctcgatccccggtgtgagcgttcctgctcctgaagctgaa
ccaccaaccaagaagcagaaactggatcgctga
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