Nothobranchius furzeri (turquoise killifish): 107376007
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Entry
107376007 CDS
T05163
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nfu04131
]
107376007
Membrane trafficking [BR:
nfu04131
]
Endocytosis
Others
Others
107376007
Endosome - Lysosome transport
107376007
Endosome - Golgi transport
107376007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GbpC
Motif
Other DBs
NCBI-GeneID:
107376007
NCBI-ProteinID:
XP_015800366
UniProt:
A0A1A8UI79
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Position
sgr03:complement(35435413..35512067)
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AA seq
1239 aa
AA seq
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MALWPFWSFFLLSCVLLYPFHPEFGVQSEITFSRSINRFYRLDAAPLGANVAGKSSGITV
ALNVNDNEVLNRLEMEETVTSKPSSGQQEDKTLSRNETPAGIRANSNDVKIPHKKYENTE
EERDGTGLMSKRLSVRGKKVKRSVGASYKENGDRSTSGEAQSPERFVDTAQGVSKSRPEY
RRPGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILILTKLYDFNLAA
VTESSLWRSTDYGSTYAKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPEVESAVLISSDE
GASFEKYPINFNILSLLFHPAQENWILAYSHDNKLYSSMDFGRKWQLVHDSVMPGRFYWA
VMGLDRESDVVHIETHIAKGRAQYVKCRAHRCTDGNRQYIFPGHVDTNSLVVQDEYVFTQ
VTKSGRTSYFVSYMREPFRQMELPKYCLPKDMHIISTDEKQVFAAVQEWNQNNTYSLYIS
DSPGVYFILSLENLRTSRGSAGNLLVDFYKVEGINGMYLANKLVDGHIKTFITYNKGQTW
ALLPAPATDVVGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGIIVGTGNIGIEL
SSSNLGMFITSDAGNSWRQIFDEEYNIWFLDNGGALLGVLHAATPIRHLWISLDEGKKWD
RHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYTGLFSRRCMDGDYQTW
LLHNKGELCVMGEKQVYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFECDYGWERQTDG
KCSPAFWFNPNGAAKSCSSSQSFLNSTGYRKVLSNNCKERGRNFFSPKRVACHPRAPRGL
QLTTGNGELSATVQSNVTFMIRLDYGDSPSTSIQLDFGDGIKITYSNLSRTDDGIKHIYR
MTGIYRVTASAENNQGSDSSTLFLHITSPVERVYLSAPIVAVSGKAANLTAVVWPSHTRT
LTFFWWFDNSSEPIITLEGSISHMFHREGKNKVTVQVACGSIVMQDSKVITVKEFFRSLL
LSFSPTLDEHNPDIPEWREDIGRVVRTALSKVSDVPEDQLMVSMYPGLPTTAELFILPDE
RTLSEHKKNSEEALDTISDIFANALNQGRIQFELKANTRIIVYMTQQTLAPLVDSNTIHS
GSAMLMLLSVVFVGLAAFFIYKFKRKIPWIHVQTEDRHEKDPEVMSTVGQNDAMSKVKLS
EFPSQKEFMEKELEGRSRGGFGRNMERIVTREFPNCTNV
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcactttggccattttggagcttttttcttttgtcttgcgtgctgctttaccccttt
caccccgagtttggagttcaatcggagataactttttccagatcaatcaacagattttat
cgcctggatgcagcgccgctgggggcgaacgtggctggaaaatcatcggggatcacagtg
gcgcttaatgtcaacgataatgaagttttaaacaggttggaaatggaagaaaccgtcact
tcaaaaccgagcagtggacagcaggaggataaaacactgagcagaaatgagactccagcg
ggaatcagagcaaactccaacgatgttaaaatccctcataaaaagtatgaaaacaccgaa
gaagagcgagatggaacgggtttaatgtcaaaacgtctttctgtcaggggaaaaaaggtt
aaaaggagcgttggagcgtcatacaaggaaaacggggataggagtacaagtggagaggcg
cagtcgccggagaggttcgtggacactgctcaaggtgtttccaagtccagaccagagtac
cgacgccctggggaggaagccagagggtcaaacccaaggcaaagtgagccacacctggac
acttctacctttgcgctgtcgggagactcggctcacaatcaggcgatggtgcactggtcc
gggcacaacagcagcgtgatcctgatcctgacaaagctgtacgacttcaacctggctgct
gttaccgagagctcgctctggagatcaactgattatgggagcacctacgccaaactcaat
gacaaagtgggttcaaggacggtcctgagctacctctatgtttgccctaccaacaaacag
aagataatgatgcttagcgacccagaagtagagagtgctgtactcatcagctcagatgaa
ggggcgagctttgagaagtatcccattaacttcaacatcctgagcctcctattccacccc
gcacaggagaactggatcctggcttacagtcatgacaacaagctgtatagctccatggac
tttgggaggaaatggcagctcgtccatgacagtgtaatgccgggcagattctactgggcg
gtaatggggctggacagagaatcagacgtggtccacattgagacacacattgcaaaaggc
cgtgctcagtatgtgaagtgcagagcccacagatgcacggatggcaacagacagtacatc
tttcctggacacgtggacacaaactcgcttgttgtacaggatgaatatgtttttacacag
gtaaccaagtcaggacgaaccagctactttgtatcctacatgagagagcccttcaggcag
atggagctaccaaaatactgtctgccaaaggacatgcatattatcagcacagatgagaag
caggtttttgctgcagtccaagagtggaatcagaacaacacgtacagtctgtatatctca
gactcccccggggtctactttatcctttcattagagaatctgagaaccagcagagggtcc
gctggtaacctactggttgacttttataaggttgaggggataaacggcatgtatcttgcc
aacaaactggtggatggtcacattaagactttcatcacatacaacaagggacaaacatgg
gctctgctgccagctcctgccactgatgttgtgggaaataaccttcactgcattctgcca
ttttgctcgctgcatcttcatctggagatgtcagagaatccctacacatctggacccatc
accagcaaaaagtctgtaccgggaatcatcgtgggaacagggaatatcggcatagagctg
tcctcctccaaccttgggatgttcataacatctgatgcaggaaatagttggagacagatt
tttgatgaagagtacaacatttggtttctggacaacggtggagctttgctcggagtctta
catgcggccaccccgattcgacatctgtggatcagtctggatgaggggaagaaatgggat
cgccacagtttctccttggcacctttgtatgtggacggagttttaatggagccagagtct
gacaatcacattatcaccttttttggacactttagccatcgatctgagtggcaactgatc
aagattgactacacgggtctttttagcaggcgatgcatggatggggattatcagacgtgg
cttttacacaacaagggagagctctgtgtgatgggtgaaaagcaggtctatatgaagcga
aggcctggcaaccgttgcatgctggcccaagactactccaggatctactcctcagagcca
tgtctctgcacagcctatgattttgaatgtgattatgggtgggaacgccaaacggatggg
aagtgctctcccgctttttggtttaatccaaatggtgcggctaaaagctgcagctccagc
caaagctttcttaacagcactgggtaccggaaggttctgtccaataactgcaaggagaga
gggaggaacttcttctcacctaagagggtggcgtgtcatccccgagctcctcgaggcctc
cagctgaccacgggaaatggagagctgagcgccaccgtccaaagcaatgtcacgttcatg
atccgcctcgattatggagactcgccgagcaccagcatccaactagacttcggggacggc
atcaagatcacatactccaacctgagcaggaccgatgacggcatcaagcacatctacagg
atgactgggatttaccgagtgacagcctctgcggaaaacaaccagggatctgacagcagc
acgctcttcttacacatcaccagtccagtggagcgagtatacctctctgctcccattgtg
gccgtcagtgggaaagcggctaatctgaccgcagtcgtttggccgagccacaccagaact
ctgaccttcttctggtggtttgacaacagctccgagcccattattactctggaaggaagc
atctcccacatgtttcacagagaggggaaaaacaaggtcacggtccaagttgcttgtgga
agcatcgtcatgcaggactccaaagttatcactgttaaagagttcttcaggtcactgctg
ttgtcgttttcgccgactcttgatgagcacaatcctgacatcccagagtggagggaggac
ataggccgtgtggtgcggacagctctgtcaaaggtgtctgacgttcctgaagatcagctg
atggtgtccatgtacccgggactcccaaccaccgctgagctctttatcctgcctgatgag
cgcaccttaagtgaacacaagaaaaacagtgaagaagcactggacacaatatcagatatt
tttgccaatgccctgaaccaaggccggatccagtttgagctgaaagctaatactcgcatt
atcgtgtacatgactcagcaaactttggctccacttgtggattcaaataccatccatagt
gggtcggccatgctcatgctgctcagcgtcgtattcgttggtttagctgcattttttatc
tacaaattcaaaagaaaaatcccatggattcatgttcagacagaggaccgccacgagaag
gatccagaggtgatgagcacagtgggtcagaacgatgccatgtccaaggtcaaactcagc
gagtttccatctcagaaagaattcatggaaaaggagctggagggcagaagcagaggagga
tttggaagaaatatggagagaatcgtcacaagagaatttccaaactgtactaatgtctaa
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