Nothobranchius furzeri (turquoise killifish): 107376151
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Entry
107376151 CDS
T05163
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107376151
03036 Chromosome and associated proteins [BR:
nfu03036
]
107376151
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107376151
Chromosome and associated proteins [BR:
nfu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107376151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
107376151
NCBI-ProteinID:
XP_015800587
LinkDB
All DBs
Position
sgr03:68963479..68992564
Genome browser
AA seq
1826 aa
AA seq
DB search
MEDKKKKKEEKKKRETSQKVPEQKIKVPESAKPSGSQPLSTPDLVSPSPGPVSPSSPSPG
AAGGGSAQVLPGGGNNAKQWSAVALGQPSSSPSGSQASQQQRYMSREVPPRFRCQQDHKV
LLKRGQPPLSSMLLGGGGGGDAGEGGGWDAAPSSQGADDPITNTAGHADSNLGSSSPPPP
ISSSSCVAAQSSSSTTSTYANSTWGAGSSSQPPSQGCGRVIVEGTDLEDWPCITAGSRQS
SDCAGTGMQQQDGPGNNSSASWGEGNMQQRGGAAGGGGGDMDNPSPTHSTPLSSSSTLNE
CAQSGGGVWSTSSQAEATFHNSKVSLLPSGPQENPVGGNSNVPGANFNPSVNPSAWPALG
QSATSTSANDSFPLHSSITSSFSASTTLIATQTLSSVNQTGPYQQHTDTTVGAKDGEQHL
GNPGLDQVSGGGPREAGPNQKGDAEKNCGIVGEEEGSSSSSSAPSSSWRPMPPLSSEPSA
GADGWGGAKRQEGGVWGFGGQDDKTRWGKGNGGGSATAAVSQGEWAGSSSEADGGSQSLA
IGSGRGVDGSSTSADGGGGSSLDDAASPHFATKTKAWDNQKGMESRDGPVGGQGGTAGSD
GGPSSSSGGGSTAGGGQKEHSSSTLNPPQQSSNAEVALLSMLSRSDLDPRVLSNTGWGQT
QIRQNVAWDLNTKTRAGSRNSSSATVTASTNPSSLYPSEAGSGSHDSGSHTAGINLESAT
VRDGWDGGSSQPTCGSFTPSSTGRKAGPSEGDVQGKTAGGWGDLPPEKDGKGWRSEDQQW
GDRRGGGKNWRDYEEQGSGWGDGPETKGAGGWKGSSGGETGGWGGQSGGGDQWGQRDASS
VGGWGDARNRVNSEEGSSWGTLDEGSSQRGGWEGGDLGGGKSHQEWGGAKPNAAAAAPIP
NSPAAPMKAQNQQQQQSQGQHPPGGPTQGGWNSRPSGGGPLSKNQNQSMGWTSGPIPQIS
VGGSDSLEPSGWEEPSPQSISRKMEIDDGTTLWGDPTRYTNKNVNLWDKNSATASQNHGQ
QGPPMQQQPPRRQQGMQLSTNSNPGSGAVGMWGGAQSVDNGTAAWGQALDAAAGWGEPED
PNKSSGWRNSSPNPAKPGTKSAESWGGKGDIPIAASRHSSWEEEDDGGGGVWNSTGSQGS
GSSFNSGGWGQTHGGKRSNIKSGPGDSWMNPVTRQFSNMGLMGDDPGVDKKMEGDKRGIT
DYNGEMRRGGRGGGGYRMPSSKDMGSADMGIYGEKVGGHGAFGAGGGGMPPSRGMHQPGM
HPMNPSQGLRAQVPHQFLSPQVPGPMLKQVPSPGGGVGGVGSVGGVGGVGGGVFPPQISP
QQLAMLANINPHMQQFHLACQLLLQQQQQQQQLLQNQRKFPQPQPLRQQPDPQQVSISDE
DILLQLNTAHFYAPTSVKTRLKVVKHTFGYLTEFQPGVPWKGIHSGGDPESDPYMTPGSV
LGSPGSPNLNDPDHPLLRDNIGPNPPLNTSLPSPGAWPYSASDSSLSNAHNTGKYSEYKP
SWPPEPIGQNKLWKTNRNSSQLPRPPPGLTNQKQALPSPWGSGGPRSARSWVGGGVNQES
RFGSGSAWSDGVSSRGSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRY
SSRQEAAKAQSALHMCVLGNTTILAEFVSEEEVARYFAHSQSGGSEGGSSGAAAAGSGAP
SSSGAGTAVGSSDRTSPGSERAAVGVSSGGSGNGSAGGESGAGVLAGVRSSGSGWQSLDG
TGTSSETSSAQGPGLAIFSQWSTNGAGEGGGVGGVESGRPGLWGGMSAGYSSSSLWGAPQ
MEERHQIDSSAGLLPGDLLGGGADSI
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaagagaaaaagaaaagggaaacctctcagaaggtg
ccagaacagaaaatcaaagtgccagagtcagccaagccctccggttcccagccactctcc
accccagacttggtgtcccccagccctggccccgtttccccttcatcccccagtcctggt
gcagcaggtgggggctccgcccaagtcctccctggtggcgggaacaatgcgaagcagtgg
tctgctgtggccctcggacagccctcctcctctccctctggaagtcaagcctcccagcag
cagagatacatgtcgagagaagtcccgccgaggttccgctgccagcaggaccacaaagtg
ctactgaagaggggccagccgccgctgtcctccatgctgctgggtggagggggagggggg
gatgccggagaaggcggtggctgggatgctgccccgtcctcacagggtgcagatgatccc
attacaaacacagctggacatgcagattccaacctgggctcatcctccccgccgcccccc
atctcatcctcgtcatgtgtcgctgctcagtcgtcttcttctactacttcaacttatgca
aattccacatggggggcgggctcgagcagccagcccccttctcagggctgcggaagggtg
attgtggaggggactgacctggaggactggccttgcatcacagccggttccagacagagc
tctgactgtgctggaacagggatgcagcagcaggacggtcctggtaacaacagtagtgcc
tcatggggtgagggaaacatgcagcagagggggggtgcagccgggggaggaggaggggac
atggacaatccctcgccaactcattccactcctctctcctcctcttccacacttaatgaa
tgtgctcagtcaggtggtggcgtgtggtccacctcgtcccaagcggaggcaacatttcac
aattccaaagtctcccttcttccttctgggcctcaggagaaccctgtgggtggcaacagc
aatgtccctggtgccaatttcaaccctagcgttaatccgtctgcgtggcccgccctggga
cagagcgcgacgtccacttcagcgaacgacagctttccactccactcgtccatcacttcc
tcattctctgccagcaccactctcatcgccactcaaacactttcatctgtgaatcaaacc
ggtccctaccagcagcacactgacacaaccgtgggagccaaggacggagagcagcactta
ggaaacccggggttggatcaagtttcgggagggggaccgagagaagcgggaccaaatcaa
aaaggtgatgctgagaaaaactgtgggattgttggtgaagaagagggctcctcgtcttcc
tcctccgctccttcgtcttcatggagacccatgcctccattgtcctctgaacccagcgca
ggtgcggatgggtggggtggagctaagaggcaggaaggtggtgtttgggggtttggtggt
caggatgacaagacgaggtggggcaagggaaatggtggggggtcagccaccgcagcggta
tctcagggagagtgggcaggaagcagttcagaagcagacggaggaagtcagagtttagca
ataggaagtggaagaggcgttgatggaagcagcaccagtgcagacggtggaggaggcagc
tctctcgacgacgctgcctcgccacattttgcaactaagacaaaagcttgggacaatcag
aaagggatggagagcagggacgggccagttggagggcagggtggaacagctggaagtgac
ggaggaccctcatcctctagtggaggcggatccacagctggaggtgggcaaaaggagcac
tcctcgtccacactcaatcctccccaacagtcctccaatgctgaagtggccttacttagc
atgctcagccgatctgacctggaccccagggttctgtccaacaccggctgggggcagacc
cagatcaggcagaacgtggcctgggacctgaacaccaaaacaagagcaggaagcagaaac
tcgtcatcagcaactgtgaccgctagcactaatccgagttctctgtatccatccgaggct
ggctctggctctcacgattctggtagtcacacggccggtataaacctcgaatctgccacg
gtcagagatggttgggatggaggtagctcacagcccacctgtggttcgtttacgccgagt
agcaccggcagaaaagcagggccatcagaaggcgatgtccaggggaagacagctggtggg
tggggtgatctcccacctgaaaaggatggcaaagggtggaggagtgaagaccagcagtgg
ggagaccgcagaggaggaggaaagaactggagggactacgaagaacaaggtagtgggtgg
ggagatggtccagagactaagggagcaggagggtggaaggggtcttcaggaggagagacg
ggtgggtggggaggacagagtggaggtggagaccagtggggacagagagacgctagttct
gttggaggctggggagatgcaagaaatagagtcaactctgaggagggatcctcttggggg
actttggatgaagggagttctcaacgaggaggatgggaaggaggagatttgggcggaggc
aagtcccaccaggaatgggggggtgccaaacccaacgcagcagcagcagcaccgatacca
aacagcccagcggcaccaatgaaagcccaaaatcaacagcagcagcaatcacaaggccag
catccgccgggaggacccacacaaggagggtggaacagtcggccaagcggtggaggtcca
ctttcaaagaatcagaaccaaagcatgggctggacctccggcccaattccccaaatctct
gtgggcgggagtgactccctggagcccagtggctgggaagagccctccccccagtccatc
agtcgtaaaatggaaatagatgacggcacgacgctgtggggagacccgacacgttacacc
aacaagaacgtgaacttgtgggacaagaacagcgccacagcgagccaaaaccacggtcag
cagggcccgccgatgcagcagcaacctcctcggaggcagcaagggatgcagctcagcacc
aactcaaacccgggcagtggtgcagtgggcatgtggggaggcgcccagtctgtggataac
ggtactgctgcctgggggcaggcgttggatgcagcagcaggttggggggaaccagaggat
cccaacaaatcatcaggctggaggaactcttctccaaaccctgcaaaacctggcactaaa
tcagctgaaagctggggcgggaagggggacatccctattgcagcctccaggcattccagc
tgggaagaggaggatgatggcggtggaggggtctggaacagcacaggctcccagggaagt
ggctcgtcctttaactccggaggatggggtcagactcacggaggaaaaagaagcaacatc
aagagtggaccaggagacagctggatgaatccagtgacacggcagttttcaaacatgggg
ctcatgggagatgacccgggtgttgacaaaaagatggaaggagacaagagaggaataacc
gactataacggagagatgcggaggggtggaagaggaggtggagggtaccgcatgccaagc
tccaaagatatgggctctgctgacatggggatctacggtgaaaaggtgggtggccatgga
gcgtttggtgctggtggaggcgggatgcctccctctcgggggatgcaccagcctggcatg
catccgatgaacccctcccaggggctacgtgctcaagtgcctcatcagttcctgtcccct
caggtgccgggccccatgctgaagcaggtgccctctcctggtggaggggtaggaggtgtc
ggcagcgtgggaggagtcggtggtgttggcggaggagtgttcccgcctcagatttccccg
cagcaacttgcaatgctcgccaacattaacccccacatgcagcagttccatctggcttgt
cagctcctgctgcagcagcagcagcaacagcagcagcttctgcagaaccagcggaagttc
cctcaaccccagcctctcagacagcagccagacccacaacaggtgagcatttcagatgaa
gacatcctgctacaactcaacactgctcatttttatgctccaacatcagtcaagactaga
ttaaaagttgtcaaacacacgtttggctatctgacagaattccagcctggtgttccctgg
aaaggaatacatagtggaggagacccggaatcggacccctacatgactcctggcagtgtt
cttggctccccaggatccccgaacctcaacgatccagaccacccgctactgcgagacaat
atagggccaaacccccccctcaacacctcgctgccttcacctggtgcctggccctacagt
gcctcagacagctccctcagcaatgcgcacaacacaggaaagtactccgagtacaagccc
agctggcctccagagcccatcggacaaaacaagttatggaagaccaatcgcaatagctca
cagctgccacgcccacctcctggcctgaccaatcaaaagcaggccttgccctccccctgg
ggttctggaggcccacggtcggcccggagctgggtgggaggtggggtgaatcaagagtcg
agatttgggtcaggctcagcttggagcgacggcgtttcctccagaggcagctgctggttg
ctgctgagcaacttaaccccccagattgatggctccacgctaaggacgatctgtatgcag
cacggccccctgctgaccttccacctgggcctcacccagggcagcgcgctgattcgttac
agcagccggcaggaagcagccaaggctcagagcgctctgcacatgtgcgttctgggtaac
accacaatcctggctgaatttgtgagtgaagaagaggttgcacgctattttgcacattcc
caatctggagggtccgaggggggcagctcaggggcagcagcagcaggcagcggggcgcct
agctcatctggagcaggcacggctgtgggcagcagcgacaggacctccccggggagtgag
cgagcagcagtgggcgtgtcttcaggcgggagtggaaatggtagtgcaggaggagagagc
ggagcaggggttcttgctggagtgaggtcttctggctctggatggcagagtcttgatggt
acaggcacctcttcagagacctcctcagcccaaggacccgggcttgctatattttcccag
tggagcaccaacggtgcaggggagggaggaggtgttgggggagtagagtctggtaggcct
gggctatgggggggcatgagcgcaggatactcgagcagcagcctttggggggcgccacaa
atggaggaaagacaccaaatagacagctcagctgggctgttgcccggcgacctgctgggg
ggaggagccgattccatctga
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integrated database retrieval system
