Nothobranchius furzeri (turquoise killifish): 107376338
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Entry
107376338 CDS
T05163
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu00260
Glycine, serine and threonine metabolism
nfu00630
Glyoxylate and dicarboxylate metabolism
nfu00670
One carbon pool by folate
nfu01100
Metabolic pathways
nfu01200
Carbon metabolism
nfu01230
Biosynthesis of amino acids
nfu01240
Biosynthesis of cofactors
nfu04981
Folate transport and metabolism
Module
nfu_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
107376338 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107376338 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
107376338 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
107376338 (shmt1)
Enzymes [BR:
nfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
107376338 (shmt1)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
107376338
NCBI-ProteinID:
XP_015800872
UniProt:
A0A8C6KM18
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Position
sgr03:complement(68089945..68103476)
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AA seq
482 aa
AA seq
DB search
MSLTNGHSVSKETWDSHNKMLLEPLAVNDSEVFSIIKKEKHRQIYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAFGLDADKWGVNVQPYSGS
PANFAIYTAVVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMPYKVNPETGYI
DYDRLQENARLFHPRLIIAGVSCYSRNLDYARLKQIAGENGAYLMGDMAHISGLVAAGVV
PSPFEHCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFKAYQSQVLANCKALSGALMDLGYKIVTGGSDNHLILLD
LRNKGTDGGRAEKVLEACAIACNKNTCPGDRSALRPSGLRFGSPALTSRGLVQDDFKKVA
HFIHRGIELTLEIQRSMDPKAPLKEFIQALVNGETFQQRVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacaaacggccacagtgtgagcaaagaaacctgggactcgcacaacaagatg
ctgctggagcctctggccgtcaatgactctgaggtgttttccatcattaaaaaggaaaag
cacagacagatatacggtctggagctcatagcgtctgaaaacttcgccagcagagctgtt
ctcgaggctcttggttcctgcatgaacaataaatactctgaggggtatcctggacagagg
tattatggtggaacagagcatgttgatgagctagagcgtctttgtcagaagagagcgctg
gaggcctttggtctggatgctgataaatggggagtcaacgtgcagccatactcaggttct
cctgctaactttgccatctatacggctgttgtggagccacatggcaggatcatgggtctg
gatcttcctgatgggggtcacctgacacacggattcatgactgataagaagaaaatatct
gcaacatccatcttctttgagtctatgccatataaggtgaacccagaaactggctacatt
gattatgatcgactgcaggaaaacgcgcggctcttccaccccaggctcatcatcgcagga
gtaagctgttattctcgcaacctcgactacgcccgcttgaagcagattgctggtgagaat
ggcgcctacctgatgggggacatggctcacatcagtggactagtggctgccggagtggtg
ccctcaccctttgagcattgtgacatcgtttccacgacgactcacaagacgctgcgcggc
tgccgtgctggactcatcttttataggaaaggtgtacggagcgtagacgccaaaggaaag
gagacgctctacaacttggagtctttgattaaccaggccgtgtttccagggctgcaggga
ggaccacacaaccatgcgattgcaggtgtggctgtggctctcaaacaggcgatgactcca
gagtttaaggcctaccagtcacaggttcttgccaactgcaaagctttatccggcgctcta
atggatctgggttacaagattgtcaccggtggttctgacaaccatctaatcctgctggac
ttgcgtaataaaggaactgatggaggacgagccgaaaaggttctggaggcttgtgccatc
gcttgtaataagaatacctgtccaggagaccggagcgcgctgcgtcctagtggtctgagg
tttggttctccagctctgacctccagaggcttggtgcaggatgacttcaagaaggtggcc
cacttcattcacagaggtatcgagctgacgttggagatccagagaagcatggatcctaaa
gcccctctgaaggagttcatccaggcattggttaatggagagacgttccaacagcgagtg
gctgagatcagagctgaggtggaggcctttgctggccagttccccatgcctggtctacct
gagctgtag
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