Nothobranchius furzeri (turquoise killifish): 107376339
Help
Entry
107376339 CDS
T05163
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107376339 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nfu03021
]
107376339 (cpsf4)
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107376339 (cpsf4)
Transcription machinery [BR:
nfu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107376339 (cpsf4)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107376339 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
107376339
NCBI-ProteinID:
XP_015800874
UniProt:
A0A1A8APM5
LinkDB
All DBs
Position
sgr03:complement(68074638..68079800)
Genome browser
AA seq
263 aa
AA seq
DB search
MQDLLATVDHIKFDLELAMEQQLGAQPLPFPGMDKSGSAVCEYFTRGTCMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGTSEQPP
LQQQLQNQTKPVPTIGRSSHNYIQLTSPIQRIQNNTTVPIQQNNLMTNRGPRPLDQVTCY
KCGEKGHYANKCTKGHLAFLSGQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacttgttggccaccgtggatcacatcaagttcgatctggaactagctatggag
cagcagctgggagcgcagcctctgcctttccccggcatggacaagtcagggtcagctgtg
tgtgagtacttcaccagaggaacctgcatgaaaggtgggatgtgtccgttccgtcacatc
agcggagagaagacggtggtgtgtaaacactggctcagaggactgtgtaagaaaggagac
cagtgcgagtttctccatgagtatgacatgacaaagatgcctgaatgctacttctactca
aagtttggtgagtgtagcaataaggaatgtcccttcctgcacattgatccagagtctaag
atcaaagactgtccatggtacgaccgaggcttctgtaaacacgggcctgactgcagacac
agacacacaagaagggtgatctgtgtgaactacctggtgggtttctgtccagaaggaaag
tcctgtaaatttatgcacccccggtttgagctgcctatgggaacttctgaacagcctcct
cttcaacagcaacttcagaaccagacaaagccggttccgactatcggccgatcatcacac
aactacatccagctgaccagtccgatccagaggattcagaacaacacaactgttcccatt
cagcagaacaacctgatgaccaaccgggggcctcgtcctctggaccaggtcacctgctac
aagtgcggcgaaaagggccactacgccaacaaatgcacaaaaggtcatcttgccttcctg
agtggacagtaa
DBGET
integrated database retrieval system
