Nothobranchius furzeri (turquoise killifish): 107376466
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Entry
107376466 CDS
T05163
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107376466 (rnps1)
03015 mRNA surveillance pathway
107376466 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107376466 (rnps1)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107376466 (rnps1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_ACIN1
RRM_3
RRM_occluded
RRM_5
RRM_MUD2_C
RRM_10
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
107376466
NCBI-ProteinID:
XP_015801052
UniProt:
A0A1A8V850
LinkDB
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Position
sgr03:59981080..59983857
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AA seq
279 aa
AA seq
DB search
MAPSPTKRKEEEKSKDRGKEKTATKEGDKERGRDKVRKRRSASSGSSSSSRSSSSSSSSS
GSSSGSSSGSSSSGTSRSGSSSSRSSSSSSSSGSPSPSRRRHDNRRRSRSPSKTQKRGED
KERRKRSPIVKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMIDMQMDRMHPHLSKGHAYV
EFETPEEAQKALKHMDGGQIDGQEITAAAVLPQRIRLPPRRLSPPRRMPPPPPMWRRSPP
RMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcaccatctcctacgaaaaggaaggaggaagaaaaatctaaagataggggcaaagag
aagactgccaccaaggaaggagacaaagagagaggacgggacaaagtaaggaaacgtcgt
agtgcctcttctggaagcagcagcagcagcagatctagctcatcatccagcagcagctct
ggttctagctcaggttcctcgagtggatccagctcttctggcaccagtcgatctggatcg
tccagctctcgatcgtcatcctcctccagctcctctggctcgccgagccccagccgcagg
cgccatgacaaccgccggcgctcccgatcaccgtctaaaacacagaagagaggagaggac
aaagagcgaaggaaacgaagcccgattgtcaaacccactaaggttcacttaggaaggctg
accagaaacgttaccaaggatcacatccaggagatcttttccacttatggaaaaatcaaa
atgattgacatgcagatggataggatgcacccacacctgagcaagggccatgcttatgtg
gagtttgagacccctgaggaggcacagaaggcccttaaacacatggacggaggtcagatt
gacggacaggaaatcacagccgctgctgttctgcctcaacggatccgtctaccacctcgc
agactgtctcctcctcgcagaatgcccccaccacctcctatgtggcggcgcagcccacca
cgcatgaggaggaggtctcgttctccaaggagacgatccccggcacgtcgccgttcccgc
tccaggtctcctggtcgccggcgccatcgctctcgctccagctccaactcctccagataa
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