Nothobranchius furzeri (turquoise killifish): 107376473
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Entry
107376473 CDS
T05163
Symbol
abca3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107376473 (abca3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107376473 (abca3)
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107376473 (abca3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
AAA_29
RsgA_GTPase
AAA_27
Motif
Other DBs
NCBI-GeneID:
107376473
NCBI-ProteinID:
XP_015801059
UniProt:
A0A8C6KN10
LinkDB
All DBs
Position
sgr03:59740353..59799387
Genome browser
AA seq
1709 aa
AA seq
DB search
MAIVRQFGLLVWKNYLQQKRQILVTLVEILLPLLFSGILIALRQKVDSKVFPNATIYESF
DVDSFQRFSNLQKLQLVYVPGNSSVVRQVAYDVQRMLSLSSVRGFETEEKFENFVRNDPM
SHNVLAAVVFEHSFSHDDEALPLKVSYHLRFTFTPRNAPATEKSELNPNNDFDWHTLSLF
PLFQLPGPREQYEREGGTPGYFREGFLAVQHAVDRAIMTAYNRTAAWSLLPQTRVVLSRF
PYPAFIYDVFILAIQNQLPLLLVLSFTYVSLNIVRAVVQEKERKLKEYMRMMGLSNWLHW
SAWFLMFFLFLSISVFLVTLLLCIQVSPNGAVLSRSDPTLVFVFLLVFTVATINFSFMIS
AFFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIGMF
EGKGTGIQWSNLFDSVTVDDDFSLAQVLSLLLFDSVLYGLVAWYMEAVFPGEYGVPLPSY
FFLLPSYWCSTPRVALLKEKEEEEDAEKALKGEFMEEEPAGVVSGIKIKHLTKEFKVGSK
TRQAVQDLTLNMFEGQITVVLGHNGAGKTTTLSMLTGLFPPTSGMAYINGYNICQDMALI
RRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPKEKISDEVDRILHILNLEDKQKARSKT
LSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKLSRTILLTTHFMD
EADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDALCNVSEISRLVHLYVPNA
TLESSAGAELSYILPKESTSRFELLFAELEMNKEELGIASYGASVTTMEEVFLRVGKLVD
SSLDIQAIQLPALQYQHERRSHDWTMDDASSISALTDVTDFTDSGTLISDDCSNIKLNTG
MRLHLQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVMAIVVARTLPNSRNDPQLRLDL
SRYGPTRVPVALQSSSGPLASALAELYSSQLSPQLGQLINITDFTDYVLTQTEEEGGSFN
ERCVVGAAFHGRTSRFSEVTAYFNNQGYHTSATALMMVDNALFKLIAGPNASIETGNFPM
PRNLSESARSQITEGRTGFAIAINLMYGMASLSSTFALLLVTESSIKSKHVQKVSGVYLS
NFWLSALLWDLVNFMLPCLLMLVVFRAFGVDAFVENNHLVDVLLMLLLYGWAVVPLMYLL
SFFFSTAASAYTRLTIFNVISGTATFLAVTIMTIPALHLDHLAHLLDKVFLIFPNYCLGM
CVSQFYQNFEFIKFCTSSPFSELICKTLNITYQLNYFSMSEPGVGRFLVSLSVQGAVFNI
LLFAIEMQCVRTLWRLLTSLVRKRKQLPLIEDAALLPEDRDVAEERKRVLECQPVVESMV
GSPLILQELSKVYSSGGSILAVDRLSLAVRKGECFGLLGFNGAGKTTTFKMLTGDESVTS
GDAFIDGYSILRDIKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSGCVEN
VLRSLLLEPHADKVVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAV
TRTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHV
DADLEDSDLLLFKDFIESTFPGSQLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYRI
EDYCVSQISLEQVFLSFAQFQHCAQTDRK
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgtcagacaatttggactgctggtgtggaaaaattatcttcagcagaaacgt
cagatcctggtgaccctggtggagatacttcttcccttgcttttttctggcatcctcatt
gcgcttcgccagaaggtggactctaaagttttcccaaatgccaccatctatgaaagcttt
gatgttgacagtttccagagattttccaacttgcaaaagttacagttggtctatgtgcct
ggtaactccagcgtggtgcgacaagtggcgtatgatgtgcagagaatgctttcactttcc
tcagtgcgtggctttgagacagaggagaagtttgagaactttgtgaggaatgaccccatg
tcacacaacgtgcttgctgccgtggtgtttgagcactccttctctcacgatgatgaagct
ctacctctgaaggtgagctaccacctgcgcttcaccttcactccacgcaacgccccggcc
acagaaaagtctgaactgaacccgaacaatgacttcgactggcacacactcagcctcttt
cctcttttccaactgccaggcccaagggagcagtatgaaagggagggcggcacacccggt
tatttcagagaggggtttttggccgtgcagcatgccgttgatcgagccatcatgaccgcc
tacaacagaactgctgcttggagtctgctgccacagaccagagtggtcctgtcccggttt
ccgtaccctgctttcatatacgacgtcttcatcctggccatccagaaccagctgcccctc
ctcctggtgctcagcttcacctacgtctccctcaacatcgtcagagctgtggtgcaggaa
aaggaacggaagctcaaggagtacatgaggatgatgggtctcagtaactggctccactgg
agtgcttggttcctgatgttcttcctcttcctttctatttccgtttttttggttaccctg
cttctctgtatccaggtgagccctaacggagcagtgctgtcccgaagcgacccaacgctg
gtcttcgtcttcctgctcgtcttcactgtcgccaccatcaacttcagcttcatgatcagc
gccttcttctcacgagctaatgtggcagcagcagctggtggcttcatctacttcctcagc
tacctgccttatttgttcctgtggcctcgctacgacctactgagccatgcccaaaaggtg
tccgcatgcctcatctccaacgttgccatggcaatgggagctcagcttattggaatgttt
gaaggcaaaggtacgggaatccagtggtccaacttgtttgactcggtgacggtggatgat
gatttctccttggcccaggtcctcagcttgctgctgtttgactcggtgctctacgggctg
gtggcctggtacatggaggcggtttttcctggggagtacggcgtgcctctaccatcgtac
ttctttttactgccttcgtactggtgcagcactcctcgtgtggctttgctgaaggagaag
gaggaggaggaagatgcagaaaaggctctgaaaggagagttcatggaggaggagcctgct
ggagtggtttctggaataaagattaaacacctcaccaaggagtttaaagtaggcagcaag
acacgacaggctgtacaagatctgacgctgaacatgttcgagggacaaatcaccgtggtg
ctaggacacaacggcgctgggaagaccacaactctgtccatgctcacaggtctcttcccc
cccaccagcggcatggcctacatcaacggttacaacatctgtcaggacatggccctgatc
cgacgcagcctgggactctgcccgcagcacgacgtgctgtttgataacctcacagtgaga
gaacacctgctcttctatgcacagctaaaaggataccccaaggagaagatatctgatgag
gtggataggatcctccacatcctgaacctagaggacaagcaaaaggctcgctccaagacc
ctctctggtggcatgaagagaaaactttctattggcatcgccctcatcggtgactccaag
gtggtcatgttggacgagcccacgtcggggatggatccgtcagctcgccgagccacctgg
gatctgctgcagggagaaaagctcagtcgcaccatcctgctcaccacccacttcatggac
gaggccgacctgctcggtgatcgaatcgccatcatggcgggaggcgagctgcagtgctgc
ggctcaccgctcttcctcaagaacaaatatggcgccggctaccacatggtgattgttaag
gacgccctctgcaacgtctctgagatcagccgcctcgtccacctgtacgttcctaatgct
acgctggagagcagcgccggagcagaactctcctacatcctacccaaagaaagcaccagc
aggtttgagctgctgtttgcggagttggagatgaacaaagaggagctgggcatcgccagc
tacggcgcctcggtgaccaccatggaggaggttttcctcagagttgggaagctggtggac
tctagtttggacattcaggccatccagctgccagctctgcagtaccaacacgagagacgc
tcacatgactggacgatggatgacgccagcagcatcagcgctctgaccgacgtcaccgat
ttcacagacagcggcacgctcatctcagatgattgctccaacatcaagctgaacacgggg
atgagactacacctgcagcagttctacgccatgttcttaaagagggcgctgtacagctgg
agaaactggaaggtgatggtggctcagttcctcgttcctctaatcttcaccgtcatggcc
atagttgtagcgcggaccctccccaacagccggaacgaccctcagctgaggctggacctc
agtcgttatggtcccaccagggtccctgtggccctgcagtcgagctcggggccccttgct
tcagccttggcagaactgtacagctcacagctatcgcctcagctcggtcagctcatcaat
atcacagacttcacagattacgtcctaacccagacagaggaggaaggtggcagctttaac
gagcgctgcgtggtcggggctgccttccacggcaggaccagtcggttctcagaagtaacg
gcctacttcaacaatcagggctaccacacatccgccacagccctcatgatggtggacaac
gcactgttcaaacttatagccgggcctaacgcctccatagaaacaggaaacttccccatg
cctcgaaatctatccgagtctgcacggagccagatcacagagggaagaacagggttcgcc
attgccatcaacctgatgtacggtatggcctctctgtcgagcacctttgccctgctgcta
gttaccgagtcctccatcaagtctaagcacgtgcagaaggtcagcggcgtctacctttcc
aacttctggctgtcggcccttttgtgggacctggtgaactttatgctgccctgtctcctc
atgctggtggtattccgtgcgtttggagtcgatgcatttgttgagaataaccacctagtg
gacgtgctgctgatgctcctgctctacggctgggctgtggtgcctctcatgtacctgctc
agcttcttcttctccactgctgcctctgcctacacacgactcaccatctttaatgtgatt
tccggtactgccaccttcctggccgtcactatcatgacaatcccagctttgcacctggat
cacttggctcatttactggataaagtgttcctgatctttccaaactactgcctgggcatg
tgtgtcagccagttctaccagaactttgagttcatcaagttttgcacctctagtcctttt
agtgagctcatctgtaagactctaaacatcacctaccagctcaactacttctccatgtct
gagcctggcgtcggacgcttcctggtgtccctctctgtgcagggggccgtcttcaatatt
ttgttgtttgccattgagatgcagtgtgtccgcacgctttggcgactcctcacttccctg
gtcagaaaacgaaaacagttgcctctaatagaggatgcagcactgcttccagaggacaga
gatgtagctgaggagaggaagagggttttggagtgccagccagttgtggagtctatggtt
ggaagtcccctcatcctgcaggagctcagtaaggtgtacagcagcggggggagtattctg
gccgtggacaggttgtctctcgccgtgaggaagggggagtgttttggccttttaggcttc
aatggagcaggaaagaccacaacatttaagatgctgacaggtgatgagagtgttacgtct
ggtgacgccttcattgatggttacagcatcttaagggacattaagaaggtgcagcagcgt
ataggctactgtccacagtttgatgcagtgctggaccacatgacaggaagagagactctg
agtatgtacgccaggctcagaggaatcccagagaagtacgtgtctggctgtgtggagaat
gtcctgaggtccctgctgctggagcctcatgctgataaagtggtccgcagctacagtggt
ggaaacaagcggaagctgagtgcaggcatggctctgattggtggacctccagtcatcttc
ctagacgaaccttcgacaggaatggacccagtggcgaggaggctgctgtgggatgctgtt
acacgcactcgggagtccggcaaggccataatcatcacttctcacagtatggaggagtgt
gaggccctgtgtaccaggctggcagtgatggtcaatgggcagttcaagtgcctcgggagc
ccccaacacctgaagagcaagtttggcagtggctacaccctgctggctaaagtgcacgta
gacgctgacctagaggacagcgacctgctgctgttcaaagacttcattgaaagcaccttc
ccaggaagtcaactaaaggatgagcaccaggggatggttcactaccatttgacagacaaa
acacttacctgggcacaggtgtttggtaccttggaggcggccaaagagaaatatcgcatt
gaagactactgcgtgagccagatttcattggagcaagtgttcctcagctttgcccagttc
cagcactgtgcacagactgacagaaagtag
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integrated database retrieval system
