Nothobranchius furzeri (turquoise killifish): 107376560
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Entry
107376560 CDS
T05163
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107376560 (rai1)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107376560 (rai1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
107376560
NCBI-ProteinID:
XP_015801200
UniProt:
A0A1A7ZR37
LinkDB
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Position
sgr03:56775881..56788361
Genome browser
AA seq
2200 aa
AA seq
DB search
MQSFRERSSGYHSNQPCYQQEPQELSRLETYRQHPHHPHPQHPHPGPGPHPGPGPGHNRS
GYQAHPLANTANLPPASGAGIGGPKDCYSQQTYTSYQGNGGGNGSGNGGSAATQAKKSFR
GGKVPPPNPGQHMQGPGSYSNPMGPGNYSAQYMSEGHLQQKWEDPAHLAQYEQEMVGRLE
AGAAPTPSSSQFMDSNMLGHSQPQCHQPSTPNYSSPHHQPHPPNPSPSPLMYPQSHLHYS
QHSPSPSSYMEKCSPMPHCYKGYNMPPNSQYGRQMSSHGGLKQGAYRSPQNSYGYQQSNP
RGFEQQPPLQTMTNPQEPLSKYQHFNQPQQSYCLSELPVRSPEQYYQTCSPSSSHSPARS
VGRSPSYSSTPSPLMTNPESFQYGQPPMTPGAASSSSSSSAGLQEQASANTMLMPPRSHP
SPNIPHATPHSYTTTPQVPTLKERFSEKLLSNPSLWSLNALTSQVENISNNVQQLLLSEA
LVANKKGSKRSSGGSNSSGGSGVSSKKGDEYKSPPYPDSCSNLGGGPIQDPYSTPQHQSL
PMELHEGGYSSSSDEPLDRGYYYFGQGRSPAQAHNNTQLSLDTASSCSIASPDDMSTRSG
DSGLHNLTPDPTRCQIGQGGDSMGTPVKSLTDEMSPKCITIPSPMKQERDSPSDMQHISQ
SIKENFEESAWTEKLAEKEEMTTVKALDCASDGNMINPTEKQEKWSDEEKCPDVYCKVNT
EMTEKSYCYDETVYREGQGKYDSDARDSIEQSPAALSDSSNKEHFGQELKSEAFKSESPT
ASESSVKTLPFTSRGDLEQDQYSTEKDESSENTSPTPQVDVLEDSSSDKRESRDQENEEG
GKEEVREEVVEEEHFKIQKKLKACLYPLVSEEVREESVEGEKETQSLAQEHINNRDNLEN
CSADLCSRTENQSCVLSADGDFAGAPSHLNAAAATTAADASARESAIGDTAPQSQSATPV
FSALNDKAAPPGQTRDHIDHSDAKVLEPDSPQLPGKSILPSAPSWADTPPSPKKGDEDVE
PGISCASAVTPLAKPEPVAPSAQPRAFGRKHTRGRRRITQSVVGIRRQLSLERGGEKEDD
LTTQKTCMPSSKTALISDQTSLVHQESIVGQTPKMPADAFQSRMCTRSFNAPDMPPKADL
NVKRKPGPKLGAKPGPKPGSKLGATPGPKARAKPGSRPGPKPNLKPGPKLTPKPGQKPVP
NDSELPPKIEIIVKRKPGPKAGLKSVPKPAAKSGQKPGPKPAEGLSSIDTTPIKASVGRP
RGSICKAKPANQENTNQQFTEVQSRSRKNLKPTMSQKSLDVKPVEQEAKEAPPEVKVPEK
ESKNMVLRSRKPSQEKMSKGKEKNVGEEIQTPTLTDVKVCDLSPDVEEVVSEDQNLTLSP
DADKTTDDSPPTLPVQSKETKVKILPPVKRKSSPEPSTIQVKRKRGPKPKPKTLPPQPSL
QEQIVPTDKSVRGTRRRRGPPKKIPVVTPITKGTAPYISGPSTISEVNVVAPTKTKVLPP
RKGRGQKYEAMVQKIASPSLKKHILTPQQDISSNDNVAAKALSEIVLKEGETSAQISGAE
MGECAKDGEEHHGEAVKNETSQESEKHEVSQEAPAQEVEGERVEKKVEQANGTSQEKFKP
KTQQDCVHDKVCTSVETPSEAEASDEKTEQASEIVSTLATKCARTKRKRWAMVESTDASV
VALEADSLIITTPRLAKQRAIKNNHEMHLKQRRKKRKGEAPLEVTETVEEANNETAESQD
TVEETVINTEPTIPPPIIQDEVLETPQVVSTELIQKPRRGRKPSANPSKKKRSKPSTEHI
LGKPVRVHKKPGPKPGMKDAIEVIEAVVRAAGCEQQQKEEREKEERERTEKETDENQETC
VVGPVVTVTEKQNELISVKRIRRKPIYQSSKLSFCPYVRINNSRDFSSWCAIVNKPEDTV
VFQRRRKKGILRMRNPFTVAKVVPHTAAMLLGPMVNTNLIGRCLACSLCGKPANYKDLGD
LCGPYYAEDSIPRKALTIPHTQSFREESDKSNRDDSSVSEVPGTSSNSEGATTSEKEETT
EASSQGASSSKHHHWRYRRLERPERLCQEGRPRRLTLRERFRRMKQLQTISTEASRDEEG
NESKLQRLQMEVEAEEHWVHENCAIWTKGIVMVAARLYGLKEAASKSAQMSCYKCQIAGA
SLSCCWRGCSYKYHYVCAKEIGCTFHEDDFSIKCPKHEDL
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttccgtgagcgcagcagtggttaccacagcaaccagccctgctatcagcag
gagccccaagaattatctcgcctggagacctaccggcagcacccacaccatccccacccc
cagcaccctcacccggggcctggtccgcatccaggcccaggcccagggcacaacaggtca
ggctatcaggcccatccattggcaaacacggctaatttgcctccagccagtggagcagga
atcggaggacccaaagactgttacagccagcaaacctacactagttaccaaggtaatggt
ggaggaaatggcagtggaaatgggggctcagcagcaacacaagcaaaaaaaagttttaga
ggaggcaaagtacccccacctaacccagggcagcacatgcagggtcctggaagctactct
aatccaatgggccctggaaattattctgcccagtatatgagcgagggtcacctccagcag
aagtgggaggacccagcccatttggcacagtatgaacaggaaatggtgggacgtttggaa
gctggtgctgcacctacaccaagctcctcccagttcatggactcaaacatgcttgggcac
tctcaaccccagtgccatcagccatctacccctaattattcaagcccccaccaccagcct
caccctcctaacccttccccatcacctctcatgtacccccagagtcacttacattactcg
cagcactccccctccccttcgtcatacatggaaaagtgcagtccaatgccccattgttat
aaagggtacaatatgcctcccaattctcaatatggcagacagatgagtagccatggcggt
ttgaagcagggggcctataggtcgccccagaacagttacgggtaccagcagtcaaacccc
agaggttttgagcagcagccccctttacagacaatgaccaacccacaagaacccctctct
aaataccaacacttcaaccaaccccaacagagctactgtctctcagagctgcctgtcaga
tctccagaacaatattatcagacatgcagcccttcctcaagtcactctcccgcacgctct
gtagggcgctcaccttcatatagctccaccccttcacctctaatgaccaatccagagtca
ttccaatatgggcagccgcccatgacacctggagcagcctcctcttcatcatcctcttca
gctggactacaagagcaagccagtgccaacaccatgttgatgcccccacgatcacaccct
tcaccaaacattccccatgcaactccccacagctacaccaccacaccacaagtacccact
ctgaaggagcgcttctcagaaaaactactgtcaaaccccagcttatggagtctgaatgct
ctcacctctcaggtggagaatatctccaacaatgtccagcaactgttgctttctgaggcc
ttggttgccaacaagaagggtagtaagcgtagcagtggtgggagcaacagcagtggtgga
agtggagtatcctctaaaaagggcgatgaatataaaagtcctccgtatccagatagttgt
agtaatttgggtgggggccccatccaagacccttattctaccccacagcaccagtcactg
cccatggaactccatgagggcggctactccagcagtagtgatgagccactggacaggggc
tactactactttggccagggcagaagtccagcgcaggcccataacaacacgcaactaagt
ctggacacagcctcatcttgctccattgcatctccagacgacatgtccacaaggtcgggg
gattcgggtctgcacaatctaacccctgaccctaccagatgtcaaatagggcaaggggga
gatagcatggggactccagtgaagagccttactgacgagatgtctccaaaatgcatcaca
attccaagccctatgaaacaagaaagagattcaccttcagatatgcaacacatcagtcag
tctatcaaagaaaattttgaagaatcagcatggacagaaaagttggcggaaaaagaagag
atgacaacagtaaaggcgcttgactgtgcgagtgatggaaacatgattaatcctacagag
aagcaagaaaaatggtcagatgaggaaaaatgtccagatgtctactgcaaagtaaacaca
gagatgacagaaaaaagctattgctatgatgagacggtatatcgagagggtcaaggtaaa
tatgactcagatgcgagagactccattgaacagtccccagcagctctctctgactccagc
aacaaagagcactttggacaagaattgaaatcagaggcattcaaatcagaatctccaact
gcatctgagagttctgtgaaaacattgccttttacttcaaggggggaccttgagcaggat
caatactctacagagaaagatgagagctcagagaacacctctccaaccccccaagttgat
gtcttggaagacagcagctcagacaaaagagagagtagagatcaggagaatgaagaaggg
ggaaaggaagaggtaagagaggaagttgttgaagaggaacatttcaaaatacagaaaaaa
ctaaaagcatgtctttacccacttgtctctgaagaagtaagggaagagtctgtagaggga
gagaaagaaacccagtcattggctcaagagcatataaataatagagacaacctggagaat
tgttcagcagatctctgcagcaggacagagaatcagagttgtgtgctcagtgctgacggt
gactttgcaggggcaccaagccatctaaatgcagcagcagcaaccacagcagcagatgca
tcggcaagggagtcagccattggtgacacagctcctcagtcacagtctgctacgccagtc
ttttctgctctcaacgacaaggcagcgcctccaggtcaaacaagggatcatattgatcac
agtgatgctaaagtactggagccagattctccccagctaccgggaaagtcaatactccct
tcagccccatcctgggccgacactccaccttctcccaaaaaaggagatgaggacgtagaa
ccaggcatcagttgtgccagtgccgtgaccccactggccaaaccagagcctgtggcccca
tctgctcagccaagggcatttggacgtaaacacaccaggggcagaagaagaataacgcaa
tcagttgtgggaattcggcgacagttaagcttggagagagggggagaaaaggaggacgat
ttgacgacacaaaaaacctgcatgccttcaagtaaaactgctttgatttcagatcaaact
agcttggttcatcaagagtctattgtgggtcagactcccaaaatgccagcagacgctttt
caatcaagaatgtgcactcgatcatttaacgcacctgacatgccacccaaagctgacctt
aatgtgaagagaaaaccaggtccaaaacttggtgctaagcctgggcctaaaccagggtct
aaactaggtgcaacacctggaccaaaggctagagcaaaaccagggtcaagaccaggacct
aaacctaacctaaagcctggtccaaaactaactccaaaaccaggacaaaaacctgtacca
aatgattctgaactaccccctaaaattgaaataatagtaaaacggaagccaggaccgaaa
gcaggtttgaaatctgtacccaaaccagctgcaaagtcaggtcaaaagcctggtcctaag
cctgcagaaggtttatcctctattgacaccactcctatcaaagcttcagtaggtcgccct
agggggtcaatctgtaaagccaaaccagcaaaccaagaaaatacaaatcaacaatttaca
gaagtacaaagcaggagccggaagaacctaaaaccaacaatgtcccaaaagagcctggat
gtaaaaccagtagaacaagaggcaaaagaagcacccccagaggtaaaggtgccggagaag
gagagtaagaacatggtcttgagatcaaggaaaccctcacaagaaaaaatgtcaaaaggg
aaagagaaaaacgtaggagaggaaattcaaacgcccacactaacagatgttaaagtctgt
gacttgtctccagatgtagaggaggttgtatcagaggatcaaaatctaactcttagccct
gatgcagacaaaacaacggatgattcaccacccacattgccggtccaatcaaaggaaaca
aaggtaaagatactccctcctgtaaagcggaaatctagcccagaaccttccactatacaa
gtgaagagaaagaggggtccaaagcccaaaccaaaaacattgccacctcaaccttcgttg
caagaacagattgtccctacagacaaaagtgtccgaggcaccagaagaaggagagggcca
cctaaaaaaatccctgtggtcacacccataaccaaaggcactgctccatacatcagtgga
ccttccaccatcagtgaggtgaatgtggtagctcctaccaaaacaaaagttctcccgcct
cggaaaggcagaggccaaaagtacgaggcaatggtgcagaagattgcatctcctagccta
aagaaacacatcctaactccacaacaagacatcagctcaaatgacaatgtggcagctaaa
gcattgtctgaaattgtgttgaaggaaggagaaacttctgcccagataagtggcgctgag
atgggagaatgtgctaaagatggagaagaacatcatggggaggcagtgaaaaatgaaaca
tcacaagaaagtgaaaaacatgaagtgagtcaagaggcaccagcacaagaggtggaagga
gaaagggttgagaagaaggttgaacaagcaaatggtacaagtcaggaaaagtttaaaccc
aaaacccagcaggactgtgtccatgataaggtttgtacttcagtggagacaccttcagag
gctgaggcttcagatgagaagacagaacaggcatcagagattgtatcgactcttgccacc
aagtgtgccagaactaaaagaaagagatgggcaatggtagagagtaccgatgcttcagta
gtggccttggaagcagatagcctaataattacaacaccaaggcttgccaaacagagggct
attaaaaacaaccatgaaatgcaccttaaacagaggaggaagaaaagaaaaggtgaggcc
cctttagaggtgacagagacagtggaggaggcaaacaatgaaactgcagaaagccaagac
acagtggaagaaacggtaataaacacagagcccacaataccgccaccaattatccaggat
gaggtcctagaaaccccccaggttgtcagtacagagctcattcagaaacctcgaagaggt
cgaaaaccatcggcaaacccaagcaaaaagaaaagaagcaagccctcaacagagcacatt
cttggcaagccagtgagggtccacaaaaaacctggtccaaaacctggaatgaaagacgcc
attgaggtcattgaggcagttgtgagggcagctgggtgtgaacagcaacaaaaagaggag
agagagaaagaagaaagagaaagaacagaaaaggagactgatgagaatcaagagacatgc
gttgtgggccctgtagtcaccgtcacagaaaaacaaaatgagctcatttctgttaaaaga
atcagacgcaaaccaatctatcagtcatctaaactgtctttttgtccttatgtacggata
aacaactccagggacttttcctcttggtgtgccatagtcaacaaacctgaggacactgtg
gtgtttcagagacgcagaaaaaaaggcattctcagaatgaggaatcctttcactgtagca
aaggtcgtgccacacactgcagccatgctgctggggcccatggtgaacacaaacctaatt
ggccgatgtcttgcatgttcgctgtgtggaaaaccagcaaattacaaagacttgggagat
ttgtgtggaccctactacgccgaggacagcattccacggaaagctttgactatcccgcac
acacagtccttcagggaagaatcagacaagtccaacagagacgacagcagtgtctctgaa
gtgccaggcacctcttcaaatagtgaaggtgcaacaacctcagagaaggaggaaactaca
gaagcctcctctcagggagcaagtagcagcaagcaccaccactggcgctaccgacggcta
gaaaggccagaacgattgtgtcaagagggtcgtccacgaagattaactttaagagagagg
ttcagaagaatgaaacagctccagaccatcagcacggaggcctcaagggatgaagagggc
aatgaaagcaagctccaaaggctacagatggaagtagaggccgaggaacactgggttcat
gaaaactgtgccatctggaccaaggggatagttatggtagctgcaagactatacggactg
aaggaagctgccagcaagtcagcccaaatgagctgctacaagtgccagattgcaggggcg
tccctcagctgctgttggagaggatgctcttataaataccactatgtctgcgccaaagag
ataggctgcacattccacgaggatgacttttccatcaaatgtcccaaacacgaggacctg
taa
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