Nothobranchius furzeri (turquoise killifish): 107376695
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Entry
107376695 CDS
T05163
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
nfu03040
Spliceosome
nfu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107376695 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
107376695 (alyref)
03015 mRNA surveillance pathway
107376695 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107376695 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107376695 (alyref)
03041 Spliceosome [BR:
nfu03041
]
107376695 (alyref)
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107376695 (alyref)
TREX complex
107376695 (alyref)
Spliceosome [BR:
nfu03041
]
Complex C
Other components
EJC/TREX
107376695 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107376695 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
107376695
NCBI-ProteinID:
XP_015801439
UniProt:
A0A1A8B6R6
LinkDB
All DBs
Position
sgr03:51105858..51109429
Genome browser
AA seq
271 aa
AA seq
DB search
MTDKMDMSLDDIIKQSRQQRGGGRGGRGRGRGGTGSGRGGGAGRLGGGGGGFGGRGGGSG
PMRNRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGAAGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADALKAMKQYNGIP
LDGRPMNIQLVTSQIDTQRRPMQGLGRGGGRTNVVVRGFGGMQRGRGGRGAGGFRGRGRG
GRGAGGGAKQQLSAEELDAQLDAYNARMDTS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagatggatatgtctttagacgacattatcaaacagagcaggcagcagaga
ggtggaggccggggaggaagaggccgtggccgcggaggcacaggcagcggccggggtgga
ggcgctgggcgactcggaggcggcggcggaggctttggaggccgaggcggtggatccggc
cccatgaggaatcgacagaacctgagtcgcgctagaggcagacctacgccttacagcagg
cctaaacagctcccagacaagtggcagcacgacatgttcgacaacggcttcagtggcttc
aatggtgctgctgggggtggcgggggagctggtgtggaaactggagggaagctcctcgtc
tccaatctcgacttcggtgtttccgatgcagacattcaggaactttttgcggaattcgga
actctgaagaaagctgcagttcattacgaccggtcgggaagaagcttaggaacagcagat
gtccactttgaaaggagagctgacgctctaaaggccatgaaacagtacaacggcatccca
ctggatgggcgacctatgaacatacaacttgtcacgtcacagattgacacacagagacgg
ccgatgcaggggctgggcagagggggtggccgtacgaacgtggttgtgcgagggtttggg
ggcatgcagagaggtcgtgggggccgtggtgctggcggttttcgaggaagagggcgaggc
ggccgtggagctggtggtggagcaaagcagcagctgtcagcagaggaactcgatgcccag
ttagatgcctacaatgccaggatggacaccagctaa
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