Nothobranchius furzeri (turquoise killifish): 107376723
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Entry
107376723 CDS
T05163
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu04010
MAPK signaling pathway
nfu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107376723 (nfkb2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107376723 (nfkb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nfu03000
]
107376723 (nfkb2)
Transcription factors [BR:
nfu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
107376723 (nfkb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
CIS_TMP
DUF6505
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
107376723
NCBI-ProteinID:
XP_015801478
UniProt:
A0A1A8B7B4
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All DBs
Position
sgr03:complement(47674623..47730996)
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AA seq
901 aa
AA seq
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MAGALRMTEATFNYENDLNFMVYDCIPPVDIKTEPYIPETAHGPYVQIIEEPKQRGFRFR
YECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVTHIDPPRVHAHSLVGRHC
NENGMCTLDIGPNDLTASFSNLGILHVTKKGVVEVLTRRLREEKKRQRGMHCHLTDAEET
SIMKEAKELGKSMDLNIVRLRFTAYLQDSNGGFTRALKPVVSNPIYDSKSPNASNLKISR
MDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIVFKT
PAYHSAEIERPATVFLQLRRKKAGDSSDPKPFTYIPQVQDKEEVLRKKQKLLPHYESWRG
GGEAGGRGGGAGGFGGAAGGTGGGFQFYQQTNGGSGGGAGPFYAESFMGFNSGGGAQMSG
STPQTEVSQQRSDGQMSLPLQQQLLQIAATLSCRASQSARQTAAALLQYCSTGDAKVLLA
LQRHLCGIQDTNGDTPLHLAIIHQQTTVIQQLIQTLLSTQQNRVLNTANHLQQSPLHLAV
ITRQPKVTELLLRAGADPSLVDKDGRTPLHLAALGGDTDILRLLLTHLGESHTHLINTTD
YHGLQPLHLAVKRDGESCLRLLVEGGAKINAQELKSGHTALHLAVRENLFKVACTLITEL
KADVNTCTFGGNTALHLASSLGSPTFCAMLIAAGADKTMENDEPLFFSSSSDEEETEPMS
EGLSERVAAAQPIKSRKRSSGGHTPLDLATCQKVRNVLINRQSPRSSHRSAKKIRPSSSE
VPDFEHSALDEDTLSRLVEVLSVGDVSWMNLAEKLGMMTLTHLYQDSPTPCQQLLQHYKV
GGGPVEVLMEALKSLGLTEGVRLLRSTQLQDDKHNTDATVDSGFSSQPMEDQEEEPAVAN
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctctgaggatgactgaagctacgttcaactacgagaatgatctgaacttc
atggtgtatgactgcattcctcctgtggacataaagacagagccctacatacctgagaca
gctcatggcccctacgttcagatcatcgaagagcctaaacagaggggatttcgtttccgg
tatgagtgtgaaggtccatcacacggtgggcttcctggggcctccagtgagaagaaccgg
agaacctacccaactgtgaagataaataactatgtgggtcacgctcgggtggaggtgcag
ctggtgacccacattgacccacctcgggtccatgcacacagcttggtaggacgccactgc
aacgaaaatgggatgtgcacgctggacatcggccccaatgacctcacagcctcgttcagt
aatctggggatccttcacgtgaccaagaaaggagttgtcgaggttctgaccagaaggttg
agggaggagaagaagagacagagaggaatgcactgtcacctgacagacgctgaagaaacc
tccataatgaaagaggccaaggagctggggaagagcatggacctgaacatagtccggctg
aggttcaccgcctacctgcaggacagcaacgggggcttcactagagctttgaaacctgtt
gtgtccaacccaatctacgacagcaagtcacccaacgcctccaacctgaaaatctccagg
atggataagacctgcggctcagttctgggaggagacgagatctttctgctctgcgacaaa
gtccagaaagatgacatagagatccgtttctatgaggaggacgacgaaggcggctgggag
gcattcggggacttctcacccaccgatgttcataaacagtacgccatcgtgtttaaaaca
ccagcctatcacagcgcagagattgagcggcctgccaccgtcttcctacaactcaggagg
aagaaggccggcgacagcagcgatcccaaaccgttcacctacatccctcaggtccaagat
aaagaggaggtgctaaggaagaagcagaagctgctgcctcactatgaatcctggagagga
ggaggagaggcaggaggaagaggcggaggagcagggggctttggaggagctgcaggagga
acaggaggaggtttccagttctatcagcagacaaacggaggttcgggtggaggagccgga
cctttttatgcagaaagcttcatgggttttaactcggggggaggagctcagatgtcaggc
tccacccctcagacagaagtctcccaacagcgaagtgatgggcagatgagtttgcccctg
cagcagcagctgcttcaaatcgcggcgacactcagctgtcgagcgtctcagagtgctcgg
cagacagctgctgccctgctgcagtactgcagcactggggatgccaaagtccttcttgcc
ctgcagagacacctgtgtggcatccaggacaccaatggagacactccgttacacctcgcc
atcatccaccagcagaccaccgtcatccagcagctgatccaaaccctgctgagcacccag
cagaatcgtgttctgaatacagcaaaccacctgcagcagtctcctctccatctggcggtg
atcacacgtcagccaaaggtgacagagcttttgttgagggcaggggccgaccctagcctc
gtggacaaagacggccgcaccccattacacctggcagctttgggtggagacacagacatt
ctccgtctcctgctgactcaccttggagaaagccacacacacctgatcaatacaacggat
taccacggtcttcagccactccacctagctgtgaagagggatggtgagagctgcctccga
ctgctagtggaaggcggggccaaaatcaatgcccaggagctgaagagtggacatacggcg
ctgcacctggctgtcagagaaaacctcttcaaggttgcctgcacactcataacagagctg
aaggctgacgttaacacctgcacctttggtggaaacaccgcactacacctggcttccagc
ctgggttcgccaacgttctgcgctatgctcattgcagcaggtgctgataagaccatggag
aacgatgaaccgctcttcttcagctcctcctcagatgaggaggaaacagaaccaatgagt
gaggggctttcagagcgagttgctgccgcacagccaatcaaatctcggaagaggtcttca
ggaggacacacacctctagatctcgctacatgtcagaaggtgcggaatgttttgattaac
cgtcagagtccaaggtccagtcatcgcagtgccaagaagatcagaccgagcagcagtgaa
gttccagattttgagcattcagcgctggacgaggacactttgtcccggctggtggaggtt
ctgagtgtaggagatgtttcttggatgaatctggctgagaaactgggaatgatgacgttg
acccatctgtaccaggacagcccgactccatgccaacagctgctgcagcattataaggtg
ggtggaggtcctgttgaggttttgatggaagctcttaagtctttgggtctgacagaagga
gtccgactgctgaggagcacccagctacaagatgacaaacacaacacagacgctacagtt
gacagtggtttcagcagccagccaatggaggatcaggaggaggagccagctgtggccaat
cagtga
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