Nothobranchius furzeri (turquoise killifish): 107377141
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Entry
107377141 CDS
T05163
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107377141
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107377141
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107377141
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107377141
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Protocadherins
107377141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6249
TMEM154
Motif
Other DBs
NCBI-GeneID:
107377141
NCBI-ProteinID:
XP_015802065
UniProt:
A0A1A8V4D1
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All DBs
Position
sgr01:complement(31351696..31547579)
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AA seq
1268 aa
AA seq
DB search
MNLPSQAHVLVISLTCLVLLCKAQERDYIVKEEQPENVRIGNLRKDLDFHLDPNIRLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTNHRIDREKLCSGVFTEKRCYYEIEVAVLPDEIF
RLVKIRFLIEDVNDNAPLFQSTVINISIPENTAINTRYPVPSAFDPDVGINGIQHYELVK
SVNEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGSPPKSSTAILQVTIS
DVNDNRPIFKESELEVSVPENAPMGTSVAQLHATDADLGSNAQIHFAFSNQVSSSTKRHF
TINSSTGLITVKQPLDREVTPVHKLIVLASDGSSTPSRATVIVNVTDVNDNVPSIDTRYI
INLVNGTVLLSENAPLNTKIALITVTDKDADLYGKVACYTDHDVPFRLKPVFNDQFLLET
AAPLDYETTREYAIKIVASDRGTPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGYNAELIYTLGPDAPDGFNVDRQTGILSVGKHLDREKQERYSFTV
IARDNGSAPLQSNVTVRLIVQDLNDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNSVITLSILNGKDNFIIDPHTGVIKPNITFDREQQSSYTFMVKAVDGGQPPSTSYAKVT
INVVDVNDNRPVFVMPSSNYSYDLVRPTTTPGSVVTRVFAIDNDTGMNAELHYSIISSII
ITSRVSPRGLFSIDKTTGNITLQEKIVLADQGLHRLVVKVKDLGQPESLHAITLVHLFVN
DSVSNATFIQEQLLKSMETPLDRNVGDNEVTPQANGYVIVVIAIIAGTMTVILVIFVTAL
VRCRQTPRHKVVQKGKQSGEWVSPNQENRQIKKKKKRKKRSPKSLLLNFVTIDESKPEDP
THEHVNGTLDLPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPV
APKKHHVIQELPLDNTFVVGCDSLSKCSSTSSDPYSVSECGCQGGFKTAGQITTRQNPSQ
TPEKSFNSPPPICPHKEACQLGKISSVNTQRRVTFHLPDGSQESCSDSGLGDPEPSSAAS
ATQPLSLSFPQEEYYEQTSPNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGH
SDSCWMPPSLAHFQSPGSNSPASTPTNTTITAALPSFGFQQSCIQGVKANMCGMGVMDGR
HTLGRSVPKKDELDKGFIRPQFYNTLDRHCSSKKEDPVKVIPLASFSSPGQHTPTGGGSS
SFLHEHQL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgccaagtcaggcacatgtgctggtgatctcgctcacctgtttggtcttacta
tgcaaggcccaggagagggactacatcgtgaaggaggagcagccggagaatgtccgcatt
gggaatctgcgcaaggacctcgacttccacctcgaccccaacatccggctttcctcgccg
ctgcagttcaagcccgtgtacaaaaccggcgatgtgcctttggtgagggtggaggccaac
acgggggagatatttaccacaaatcatcgaattgaccgggagaagctgtgctcaggagtc
ttcactgagaaacgctgctactatgagatcgaggtggcggtgctgcctgatgagatattc
agattggtcaagatccgtttcctgatcgaggatgtgaatgacaacgcgccccttttccaa
tccactgtcataaacatctccattccagagaacacagccatcaacacccgatacccagtg
ccgtcggcgtttgaccctgatgttgggatcaatgggatccagcactacgaactggtcaag
agtgtcaatgagtttggcttagacatcattgaaacccccgaaggtgacaagtggcctcaa
ctcattgttcagcagaaccttgatcgggagcaaaaagacacctttgtaatgaagatcaag
gttgaggatggtggcagcccccccaaatccagcactgccattctccaggtcaccatctcc
gatgtcaacgacaatcgtccaatcttcaaggagagtgagttggaggtctctgtaccagag
aacgctcctatggggacgtcggttgcacagcttcatgctacagatgcagacttgggctcc
aatgcacaaatccacttcgctttcagcaaccaggtctcctcctcaaccaaacgtcacttc
accattaacagctctactgggctgatcactgtgaagcaaccgttggacagggaggtcact
cctgttcataaactcattgtcctcgccagtgatggcagctcaaccccatccagagctacg
gtgattgttaatgtcacagatgttaatgacaatgttccatctattgacactcgctacatt
atcaacctggttaacggaactgttttgctgtcggagaatgcacccctcaacaccaaaata
gcccttattactgttactgacaaggatgcagatctgtatggcaaagtggcttgctacact
gaccatgacgttcctttccggttaaagccggtctttaatgatcagttcctactagaaaca
gctgcccctctggactatgagacaacccgggaatatgctattaagatagtggcctcggac
agagggacgccacctttgaacacctcagctatggtcttaattaaaatcaaggatgagaat
gacaatgcacccatcttcccccagcctgaaattcagctttccataccagagaacaacgac
ccctctacacagttaataaaaatcagtgccacagatgcagatagcggatacaatgctgag
ctcatttatactcttggccctgatgcacctgatgggtttaatgtagacagacagacaggg
attctctctgttgggaagcacctggacagagagaagcaggagaggtactctttcactgtc
atagcaagagacaatggctctgcacccctacagagcaatgtcaccgttaggctaattgtc
caggaccttaatgacaacagcccagctttcacacaccctgagtacaacttctacgtgcct
gagaacttgcctctgtatggaacggttggcttaatcacagtgactgatgcagatgcagga
gataattctgttataaccctgtccattttgaatgggaaagacaattttatcattgaccca
catactggtgtgatcaaaccaaatatcacttttgacagagagcagcaaagctcctacaca
tttatggttaaagcggttgatggagggcagccccccagcacttcttatgccaaggtcact
attaacgtagtcgatgtgaatgacaatcgtcctgtgtttgtcatgccttcctccaattat
tcatatgacttagtgcggcctaccaccacgcctggttctgtggtcactcgagtgtttgcc
attgacaatgacacaggtatgaatgctgagctgcattacagtatcatcagcagcatcatc
atcacatctagggtgtctcctcgaggtctcttttccatcgacaaaacaacgggtaacata
acactgcaggagaaaatagtattagctgatcaaggactgcataggctggtagtcaaggtc
aaagatttaggccagcctgagtcattacacgctatcactctagttcacctgtttgtgaat
gactctgtatcaaatgcaacctttatccaagagcagctgctgaaaagcatggaaacgccg
ttggatcgtaatgtaggggacaatgaggtaacgcctcaggctaatggatatgtaattgtc
gtcattgctatcatagcaggaaccatgactgtcatcttggtgatttttgttactgccttg
gtgcgctgccggcagacaccaagacataaggtggtacaaaaggggaaacagagtggagag
tgggtgtcacccaatcaagagaaccgtcagatcaagaagaagaagaaaaggaagaagcga
tcccccaaaagccttctcttgaactttgtgactatagatgaatcaaagcctgaagacccc
acacatgagcatgttaatggcacactggatcttcctgtggaactggaggagcaaaccatg
ggaaagtacaattgggcaaccacacccacgaccttcaaacctgacagcccagatttagcc
aagcattacaaatcggcatcccctcagcctacatttcagatcaaaccagaaactccagtg
gcacctaagaaacaccacgtgatccaggagctccccttggacaacacgtttgtggtgggc
tgtgactcactctccaagtgttcctcgactagctccgacccatacagtgtctcagagtgc
ggctgtcaggggggattcaagactgcggggcaaatcaccacccggcagaacccaagccag
acaccagagaagtctttcaactccccaccacccatctgtcctcataaggaggcctgtcaa
cttggaaagatatcctctgtgaatacccagcgtcgcgtaaccttccatcttccagacggc
tctcaggagagctgcagtgacagcgggctgggggaccctgagcccagcagtgctgccagt
gccacccagcctctttccctcagcttcccccaagaggagtactacgaacaaacgtcaccc
aacagccgcaccgaaggagacggaaactcagaccccgaatccaccattgaagtgaacctg
cagaaagccctggccgaagcctcagagacctgcacccaggagtgcctgatactgggccac
tccgacagctgctggatgcccccaagcttggcccacttccagagtcctggcagcaacagc
cccgcctccacccctaccaacaccaccatcaccgctgctctcccctcctttggctttcag
cagagctgcatccagggagtgaaagctaacatgtgcggcatgggggtcatggatggccgc
cacacgctgggcaggtctgtgcccaaaaaagatgaactggacaaagggttcatccggcca
cagttctacaacaccctggacagacactgcagcagtaagaaggaggacccggtcaaggtc
atcccgctggcaagcttctcctcgcccgggcagcacacacccaccggtggtggcagtagc
tcgttcttacacgagcaccagctgtaa
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integrated database retrieval system
