Nothobranchius furzeri (turquoise killifish): 107377177
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Entry
107377177 CDS
T05163
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03013
Nucleocytoplasmic transport
nfu03015
mRNA surveillance pathway
nfu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107377177
09122 Translation
03013 Nucleocytoplasmic transport
107377177
03015 mRNA surveillance pathway
107377177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nfu03019
]
107377177
03041 Spliceosome [BR:
nfu03041
]
107377177
Messenger RNA biogenesis [BR:
nfu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107377177
Spliceosome [BR:
nfu03041
]
Complex C
Other components
EJC/TREX
107377177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
107377177
NCBI-ProteinID:
XP_015802105
LinkDB
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Position
sgr04:30518141..30564557
Genome browser
AA seq
1239 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQKSSSSHS
VLQPNSQIGEEMCQNSFIKQYLAKQQELLHQRLERGAQRGEEADESPAGPEEDEDHSEDE
DSSSYVTDKSQTLPSQPSGAPGSTFHHQESPEASGVKLQRGHKEAPAPSPPRAVAYLSVR
VLGQPGGPPAASRSQEKEQTVDPGSAHSALNLSRSVGRSAGNHVQEDSDDDDEVNSDDSD
EDEDWGSSSSRAGMRKRAPPPLPHAAPSNSSAAARSKRKLQPPQHIPPPPQVDPTPMQLR
HPTPPPSPPHNLFPLPDTPKQSPPDDQERDGLRDPQVTPFQSSARQRKDSDSSSRSSSPE
PPVRGRPGPLSLLVHKMETEEASAAPGSSGDSAHSPAGCSREPLLRGSETKRAQKSREDR
KHLMEEKERELQQEQEREKKRPEEEKKKTQLEEERKQRQEEEEERERKHREEEKEKKHKE
EEEKNIIQLEEKKKERERKHQEEEKEKKRKEEEEKKEKKRKEEEEKKRIQLEEEKKKERE
RKWQEEEKEKKRKEEEKRREEERLKKEKTQEKAKEESTLAAETQDSGSSSDSDSKSDSSS
SPRSSSSSSPSYRNKTQTVSQPKTSVQRPEADDEKETGVGKVSEKPSLSKREVSEPSTAA
VTEVEPDSESSMAQQPASGSEPESSESRPEESTTPKAFAARKISLTSSKASPASTDGAAA
DAEVGNAGGRKRRWGSSTAVTVKKPSISITTESLKSLIPDIKVKQEMVVDLHPEELQLSG
DEESLDASLSDPDKGLKIRRTVTQVVPNDSQENGQPSEDVEKMEKEDEEQKPSRDKRKSS
LSDETSETQMSVELEEEKKKVTPSDSLVRRSISQQKSGVSITIDDPVRSTRQPSPPRGKV
SNIIHVTNLVRPFTLLQLKELLNRTGSVVEEGFWIDKIKSHCYVTYASTEEAVSTRTALH
GVKWPASNPKVLSVDFCKQAELDFHKGILKPKVEEDHVVQPTVPPNRPPPLMRDRDKDHN
RDKERDRDKERDRGVRDLLAERQREMERRERTRGEREWDRDKVREFARLGEDGRRSRSRE
RERRRRERAKSKERKTEKKEKDEPPVKLLDDLFLKTKAAPCIYWLPLTEEQATQRVLDRL
ERQKERERKRKEREEEEEKKREEEKKERLKAREKDSSMAASSRAAGRTADGERERDRGRE
RDGDKKEDAGHRSGRPSAGAGANSAQRARSRSNPRDRRR
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacagtcgctccgagttgcggat
ttgaaagctgccctggagcaaagaaacctcccgaaaagcggacagaaaaacacgctgatt
aagcgactcaaaggggctctgatgctggaaaacctgcagaaatcatcctcctctcacagt
gtgctgcagccaaactctcagattggggaggagatgtgccagaacagcttcataaaacag
tacttggccaaacagcaggagctcctccatcagaggcttgagagaggggcccagagggga
gaagaggctgatgaaagtccagctggaccagaggaggatgaagaccattctgaagacgaa
gacagctcatcatacgttacagataaaagtcaaacgttaccgtcccaaccctcgggtgct
cccggttctactttccaccaccaggagtctcctgaagcttcaggagtcaagctgcagcga
ggacacaaggaggccccggccccctctcctcctcgtgcggtcgcctacctgtcggtgcga
gtcctgggacagcccggtggcccccctgctgcatcccgctcccaggagaaggagcaaacg
gttgatcctggatcggctcactctgcccttaacctcagtcgctctgttgggagatcagca
ggaaatcacgtacaggaggacagcgacgacgacgatgaagtcaacagtgatgatagtgat
gaagatgaggactgggggtccagttctagcagagcagggatgcggaaaagagcgcctccc
ccattgccacacgcggctcccagtaactcctcagctgcagcgagatccaaacgcaagctt
cagcctccgcagcacatcccacccccgccgcaagtggaccccactcccatgcagctgcgc
caccccacgcctcctccttcacctcctcataacctcttccctttgccagacactcccaag
caaagtcctcccgacgatcaggagcgggatgggctccgagatccacaggtgacgcctttc
caatcttccgcaagacagaggaaagattcggattcaagctctcgctccagcagcccggaa
ccccccgtcagaggcaggccagggcccctttctctgctcgtacacaagatggagacagag
gaggcgtctgcagcgccgggctcgtcaggagattcggcacactcccctgccggctgttcc
agggaacctctgctgcgaggatcagaaacgaaaagagcacaaaagagcagagaagacagg
aagcatctgatggaggagaaggagagggaactacagcaagagcaggaacgagagaagaaa
cgcccagaggaagaaaagaagaaaacacaactggaggaggagaggaagcagcgccaggaa
gaggaagaggagagggagagaaaacaccgggaagaggaaaaggagaagaaacataaggag
gaggaggagaaaaatataatacaactagaagagaagaaaaaggaaagggagagaaaacac
caggaagaggaaaaggagaagaaacgtaaggaggaggaggagaaaaaggagaagaaacgt
aaggaggaagaggagaaaaaaagaatacaactagaagaggagaagaaaaaggaaagggag
agaaaatggcaggaggaggaaaaagagaagaaacgtaaggaggaagagaagagacgagag
gaggaacggctaaagaaggaaaaaactcaggaaaaagccaaagaagagagtacgttggcg
gctgagactcaagactcaggctcgtcttcagattctgactccaaatcagactcctcttca
tcaccacgctcctcctcttcctcctctccttcctacaggaacaaaacccaaacggtcagt
cagcctaagacgtcggtccagagaccagaggcagatgatgagaaggagaccggtgtgggt
aaagtgtcagagaaaccaagcctttctaaaagggaggtttcggagcccagcacagcagct
gttacagaggtggaaccagactcggagagctccatggcccagcagccagcatctgggtca
gagccggagagcagcgagagccgtccagaggagagcaccactcctaaggcttttgccgct
cgcaagatctctttaaccagcagcaaagcatctccagcctcaacagatggagcagcagca
gacgccgaggtgggaaacgcaggtgggaggaagcggcggtggggctccagcacggcagtc
accgttaagaaaccatcgataagcatcaccaccgagtccctgaagtctttgataccagac
atcaaagtgaagcaggagatggttgtggaccttcaccccgaggagctgcagttgtctgga
gacgaggagagcctggacgccagcctgagcgacccagataaaggcctcaagatccggcgc
accgtcacacaggttgttcccaacgacagccaggagaacggccagccaagtgaagatgtg
gagaaaatggagaaagaagacgaagagcagaagccctctagagacaaacgaaagagcagc
ctttcagacgaaacctcggaaacgcagatgtccgtggagctcgaagaggagaaaaaaaaa
gtcacccccagcgacagcctggtgcgtcgctctattagtcagcagaagtccggcgtgtcc
atcacaatcgacgaccccgttcgctcaaccagacagccctcgccaccccgaggaaaggtt
tccaacatcatccacgtgaccaacctggttcgaccttttaccctgctccagctcaaagag
ctgctcaaccggacaggaagtgttgttgaggagggcttctggatcgataagatcaagtcc
cactgctatgtcacgtatgctagcacggaggaggccgtctccaccaggacggctctgcat
ggagtcaaatggcccgctagtaatcccaaggtgctgagcgtggacttctgcaaacaagct
gagttggattttcacaaaggcatcctgaagcccaaagtggaggaggaccacgtcgtccag
ccgaccgttcctcctaaccggccgccccctctgatgcgcgatcgtgacaaggaccacaac
cgagacaaggagcgggatagagacaaggagcgggacaggggagttcgagatctgttggca
gagcgtcagagagagatggagcgccgggaaaggacgagaggcgagcgagagtgggaccgc
gataaagtccgggaatttgcgagacttggagaggacgggcgccgatcgaggtccagagaa
agggagaggaggaggagggagagggccaagagcaaagagaggaagacggagaagaaggaa
aaagatgaacctcctgttaaattgttggacgacttgttcctgaagaccaaagcagctccg
tgtatctactggcttcccctcacagaggagcaggcaacacagagggttttagaccgccta
gagcgccagaaggagcgcgagcgaaagcgtaaggagcgagaggaggaggaggagaaaaaa
cgcgaagaggagaaaaaggagagactgaaggcccgggaaaaggacagcagcatggcggcg
agcagcagagcggccgggaggacagcggacggagagagggagagagaccgcggtcgggaa
cgagacggggacaagaaggaggacgccggccacagatccgggcgaccctcagcaggcgcc
ggtgccaacagcgctcagcgcgctcgtagtcgtagcaacccgagggaccggcgtcgctga
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