Nothobranchius furzeri (turquoise killifish): 107377330
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Entry
107377330 CDS
T05163
Symbol
pcdh7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
107377330 (pcdh7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nfu01009
]
107377330 (pcdh7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nfu04515
]
107377330 (pcdh7)
Protein phosphatases and associated proteins [BR:
nfu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107377330 (pcdh7)
Cell adhesion molecules [BR:
nfu04515
]
Cadherins
Protocadherins
107377330 (pcdh7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
LYRIC
Adeno_E3_CR2
DUF1180
Motif
Other DBs
NCBI-GeneID:
107377330
NCBI-ProteinID:
XP_015802339
UniProt:
A0A1A8AYM6
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Position
sgr04:33195023..33348679
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AA seq
1259 aa
AA seq
DB search
MRTIGAVDYCYYCMLILQLVHQPAAKQVLRYRLAEEGPADVRVGNVAADLGIVAGSGEVT
FTLESGSEFFKIDNITGELSTHERRIDREKLQQCQMIFDENDCFIDFEVSVIGPAQSWVD
LFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQD
NGENSRRMGNSGDSYSGKRRFEDGASRSSVFELQVADTSDGEKQPQLIIKGALDREQRDS
YELALRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKSVYEADLPENSPPGAPILQLKAA
DADVGVNGQIEYVFGAATESVRRLLRLEETSGWLSVLHRIDREEVSQLRFTVMARDRGQP
PKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQG
ENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSASLDYEATQEYNVVIVAVDSGSP
SLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPENNAPGERVTRVTAVDADSGKNAEIAYS
LDSSVNGIFSIDADSGDIRVNTILDREQTERYEFKVIAKDKGINTLQGSATVVVLVADKN
DNEPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKHQNAEMGLFIEEEEEIFSIENETGT
IFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTLL
PPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLMAKLEQKHYG
LHRLVIQVNDSGQPSQSTTTLVHVYVNETLSNSTIVEAQVAKSLSTSLNTNIAGDPNYDL
SKQRLSIVIGVVSGIMTVILIILVVVMARYCRPKNKNGYEAGKKDHEDFFTPQQHDKSKK
PKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGRYRSVNGGPGSPDLA
RHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGTGDNISLGSDHCSEYSTQTIN
KYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPEDS
YERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECNEYGHSDSCWMPVRTSPERRPSKS
TANPQQPKLSTLMTGNGSSSSSSSSSVEQPGSQETLAMAAMANGDPTATHMMGDRNRNLL
NKKMASSSSSYEAFGSPSYVSPGGREETLGHPTEEIPLAPTGEYKPTSCGTLTRREVYL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgaggactattggtgcagtggactattgctactattgcatgctcattttgcagcttgtg
caccagcctgctgcaaagcaagtgctccggtaccgcctggctgaggagggacccgcagat
gtcagagtgggcaacgtagcagccgacttgggcatagtggccggctccggtgaggtgaca
ttcacgctcgagtcgggctccgaatttttcaaaatagacaacatcacaggtgagctcagc
acgcatgagaggcggatagaccgcgagaaactccagcagtgccaaatgatctttgatgag
aacgactgttttatagattttgaggtgtcagtgatcggaccggcgcagagctgggtcgac
ctctttgaggggaaagtcatcatactagatataaatgataacactccgtctttcccatcc
cctgtcctgacactgtcggtggaggaaaacagaccaattggaaccctttatctgctgccc
acagccacagacagggattttggcaggaatgggatagagagatatgagctcattcaggac
aatggggaaaactctaggcgcatggggaattctggggattcatactccggaaagaggaga
tttgaggatggagcaagcaggagcagtgtctttgagctgcaagttgctgacacctctgat
ggagagaagcagcctcaactcatcattaaaggggccctggatagggagcagagagactcc
tatgagctcgccttgcgtgttagagatggaggagacccccctcgctcatctcaggccatt
ttgagggtaatgatcactgatgtgaacgacaacagccctcggtttgagaaaagcgtgtat
gaagctgacctaccagaaaacagcccccctggcgcccccattctacagctgaaagcggct
gacgcggacgtgggggttaatggtcaaatagagtatgtgtttggagcagccacagagtcc
gtacggaggctgctgaggttggaagagacctctgggtggctgagtgttttgcatcgcatt
gaccgtgaagaagtgagccaactgaggttcacagtaatggctcgcgaccgaggtcagccg
cccaaaatggacaaggccacagtggtgttgaacatcaaggatgaaaatgacaacgtccct
gctattgaaattcgaaaaattggacgcattttcctcaaagatggggtagccaatgttgca
gaggatgtggtggtggacacacccattgccttggttcaggtgtcggaccgagaccagggg
gaaaacgggatagtgacatgcacagtagtaggagatgtgccttttcagctcaaaccggca
agtgagatggagggtgagcagaataaaaagaagtatttcctccacacgtctgcatcactg
gactatgaggccacacaggagtacaatgtggtcattgtggctgtggactctggaagcccc
agtctagcaagtaataactcacttatcgtcaaagtgggtgatactaatgacaacccaccc
atcttcagccagaacgtagtagaagtatccttccctgaaaacaatgcacccggtgagagg
gtgacgagagtgacggctgttgatgcagacagtggaaaaaatgctgaaatagcctattcc
ctagattcatcagtgaatggcattttctctattgatgcagacagcggagacatccgagta
aacaccatcctggatagagagcaaacagagcgctatgaatttaaagtgatagctaaagat
aagggcataaacacccttcagggttctgcaactgtggttgtacttgtagctgataagaat
gacaatgagccaaagttcatgcaggacgtgttcaccttctatgttaaagaaaatctagat
ccaaacagcccagttggcatggttacagtaattgatgcagataaacaccagaatgcagag
atgggccttttcattgaggaggaagaggagatcttttctattgaaaacgagactgggact
attttttccaccctgtcatttgaccgagaacagaaaaccacatacacattccgtgttaaa
gctgtggatggtggtgaccctcccagatctgccacagctacagtttccctttttgtcatg
gatgaaaatgacaatgcgccaactgtcaccttcccaataaacagctcctacacccttctt
cctccctccagtaacatcagaacggttgtcagaactgttatagccaccgatacagacact
ggaattaacgcagatctgaactacagcattattgggggcaaccctttcaagctttttgag
attgatgggggcactggggtcatttcactaatggcaaagctggagcaaaagcactacggc
ctccacagacttgtgatccaggtgaatgacagcgggcagccttctcagagcaccaccacc
ctggttcatgtttatgttaatgagaccctatccaattccaccattgtggaggcccaggtg
gctaaaagcctgagcacgtcccttaacacgaacattgctggcgacccgaactatgatctg
agcaagcagcgattaagcattgtgattggagtagtttcaggcatcatgacagtcattctc
atcattcttgttgttgtcatggctcgctattgccgccctaaaaataagaatggctatgag
gctggcaagaaggatcacgaggacttctttacaccacaacagcatgacaaatccaagaag
cccaagaaagataagaagaaacagaagtccaaacagcctctttatagcagtattgtaaca
gtcgaggcctccaaacccaacgggcagcggtacgatggcgtcaacgagaagctttcggac
agtcccggcatgggtcgttatcgctctgtcaacggtggaccaggaagcccggacctggca
cggcactacaagtccagttcacctctccccactgttcagcttcatccacagtcaccaaca
gctggaaaaaagcaccaggcagttcaggacctgccccctgcaaatacctttgttggcacc
ggagataacatttcccttggatctgaccattgctctgagtacagcactcaaaccatcaac
aagtacaacaaacagccgttccgtcgagtgaccttctcagtggtgagccagccccaggac
cctcaccagcagggatcgctgcagagctgttacgacagcggcctggatgagtcggagaca
cccagcagcaagagctcttcgggcccccgcctgggcgcccttcccctgcccgaggacagc
tacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgactcg
cggccattgcctgacgtagccatgactggcaaatgcaccagggagtgcaacgagtatggc
cactcggactcctgctggatgcctgtgcgcacatcgccagagcgacggccttccaagtcg
accgccaacccccaacaaccaaagctttccaccctcatgaccggaaatggcagcagcagc
agcagcagcagcagtagtgtcgaacagcctggcagccaagagaccctcgccatggccgcc
atggccaacggggatcccacagctactcacatgatgggagatcgcaatcgcaacctgctc
aacaagaagatggcctcctcctcttcctcctatgaggcctttggttcaccttcttacgtc
tccccaggaggacgtgaggagacactgggacaccccactgaggagatccccctcgcaccc
actggagagtacaaaccaacatcctgtggtacgctaacacggcgggaggtgtacctgtga
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