Nothobranchius furzeri (turquoise killifish): 107377411
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Entry
107377411 CDS
T05163
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
nfu
Nothobranchius furzeri (turquoise killifish)
Pathway
nfu02010
ABC transporters
nfu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107377411
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107377411
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nfu02000
]
107377411
Transporters [BR:
nfu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107377411
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
Motif
Other DBs
NCBI-GeneID:
107377411
NCBI-ProteinID:
XP_015802450
UniProt:
A0A9D2Z0B8
LinkDB
All DBs
Position
sgr04:complement(40028637..40354896)
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AA seq
2246 aa
AA seq
DB search
MGLLTQFSLLLWKNFTLRKRQKVRMVIELLWPLFLFFILVWVRSTNKPIYKGQCHYPNKA
MPSAGTLPWLQGMICNIENPCLDYPTPGEAPGEVNNFNSSIIAGILIELQTILGNKSVLA
KAKLLADDFNHWSSVLSLSKPSDVLMKSILKDGETFTTYLNQSLSVPAAVVQSLMNAKLQ
LSPMTGILRPGNVKSILCEGTNLDKYIQFNSQAEKEAFQNVSCSLTQQQLMDTQQVLLQN
LDGRKVLSGLPSVLNLNATDTLSLMSKTSAAATSVIEEVIRMQSSMVFKAANSLDFKKDM
FGSINILLCGKKPNISSTKMSFSLPSARPMDNMSVSNLGNNSDGFCQNLISTLEGTPGLR
YIWSTFRPLVRGKVLYTPDTPAARLLVKEANSTFDSLAMLKELADSWDELGPRVWEFLQN
SPQVNTLRTLLANPVFAAALNQRLNGTRWTSQLLGNFLYNGPPEDRPPGLPAYDWRDVYN
TTTQILKLLSKFLGCLDLNKFEATETEGHLVNKALEHLSNKTFWAGIVFKDLQPDSSSIP
PFVKYKIRMDIDEVERTNKVKSRSWTPGARDHSFNELRYIWGGFAYLQDMMDHAIIRLQT
SKTQPLGVFVQQMPYPCFVDDVFMQSIGTVLPMFLVLAFMYSVCMIIKSLVLEKELRLKE
VLRAVGVQNSALWSARFTENIVLLMVPCALMSVMVKYGKVLQYSDPSVIFIFLLVFCLAT
VSECFFISVFFSKANLAASCGGLIYFLLYLPHVLCYAWRDVMGFGAKVAVSLLSCVAFGY
GCEKFSKYEEQGIGIQWHNIAKSPEEGDRYTFIISIVMMLFDALLYWVLTWYIENVFPGQ
YGIPKPWNFPFTSSYWCGTASATDNRTDLLQDSRVEDVYLEKPPSNSKAGVSIRNLVKIY
KTGKKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFSPTSGTALVNGYDIRTDM
DVIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGRSHREVESEMEQLIKDVGLPHKRKDL
AKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWDLLLKYKQGRTIILSTH
HMDEADILGDRVAIISHGRMRCCGSSLFLKKSFGSGYYLTLVRSGTEKMSAQRGNVTQTQ
AKETQPETDCPCRDSLDEGIGSHTWDNSDLTDLTAVAQLVRCHVPEAVFLESIGQEITFI
LPYSGARDGTFAALFQKLDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAELPATQEP
LVRDWKRSSRDSRRNSVANVCSKTEHFNRTSELKEKFSRKVEDCKKRASINGRGSAVITG
WKLIRRQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPIGSFPSLELQP
WMYGLPQNTFYSNDMPENMEVSRVVDTLVNNPGFGTRCMDGDPILKLPCSSSGSDWFTPP
VDQSVLDIFLSGNWSMSNPSPSCQCSSPERTIMLPDCPPGAGGLPPPQRVQNTTDTLLNL
TGRNVTDFLVKTFEHFGKQRYGGISVGGINSQVQLTEKGVEYVIKELKGLFNSPQDNVTD
QAFQRAETLLKKLGNRDNVKVWFYNQAWHSMVSFLSVANNGILRGNLPAGQSPRQHGISV
SNHPLNLTKDQLSFTAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFVS
GVNPAVYWLASFAWDMCNYIIPCIIVIVIFLAFQQKAYVSPPNLPALILLLILYGWAITP
MMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFIMELFDDENVKHINDIVKQVLLIFP
HFCLGRGLIDMAKNQAMATLFISFGEDRFKNPLSWGMVGKNLCAMSIQGIVMFTLTILIQ
YKFFCKPRLISVTPPSAEEEDVDVARERRRVYEGGAQNDLLRTYDLTKVYPQKSTPAVVR
LCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRTEMRHVHQNMGYC
PQFDAINDLLTGREHLEFYARLRGVPENEVAMVAEWGIQKLGLVKYANKSAGTYSGGNKR
KLSTAISLIGSPPVIFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALC
TRMAIMVNGCFKCLGSIQHLKNRFGDGYTVIVRVGGFPPALKPVEDFIEQTFQGSVLKEK
HHNTLQYQLPYTPGALANIFSQFTSHQQRLGLEDYSVSQTTLDQVFVNFAKHQHEEDESH
AYGNHVDISDELPLRTMQTTNEAQKV
NT seq
6741 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacacagttctccctgctcctgtggaagaacttcactctccggaaaaga
caaaaggtgcggatggttattgagttgctatggcctctgtttctctttttcatcttggtg
tgggtgaggtccaccaacaagccgatttacaaaggccaatgtcactatccaaacaaagcc
atgccatctgctggcacactgccctggctccaaggtatgatatgcaacatcgagaatcct
tgcttggactatccaacgccaggggaagcaccaggagaggtcaataacttcaacagctct
ataattgctgggatcttgatcgaacttcaaaccattttaggaaacaagtctgttctcgcc
aaagcgaagctcctggcagatgatttcaatcattggtcttctgtcctctctctgtcaaag
cctagtgatgtcctcatgaagagtattctgaaagatggcgaaaccttcaccacatatctg
aatcagagtttgtcagttccagcagcagtggtccagagcctcatgaatgccaagcttcaa
ctcagtccaatgacgggcatcctgagacctgggaatgtgaagagcattctgtgtgagggg
acaaatctggacaagtacatccaatttaacagccaagctgagaaggaggcttttcagaat
gtcagctgttccctcactcaacagcagctgatggacacccagcaggttcttctgcaaaac
ctggatgggaggaaagtgctgtcagggctgccctcagtgctgaacctaaatgcaacagac
acactgtctctgatgagcaaaacctctgcagcggcaacatcagttattgaggaggtgatc
cggatgcagagctccatggtctttaaggcagctaattccctggatttcaaaaaagacatg
tttggaagcatcaatattctgctgtgtggtaaaaagcctaacatcagttcaaccaaaatg
tccttcagtttaccctcagcaagaccaatggataacatgtccgtttcaaatttgggcaac
aactccgatgggttttgtcagaatcttatcagcaccctggagggcacacctggtctgcgc
tacatttggagcaccttcagaccattagtgagagggaaggtcctgtacacacctgataca
cctgctgctcgccttctggtgaaggaggcaaacagcacattcgactccctggctatgttg
aaagagctcgctgattcttgggatgaacttggaccacgcgtttgggagtttttacagaac
agcccccaagttaacacattgcggactttgctggcaaatcccgtctttgctgctgctctt
aaccaacgcctcaatggtaccagatggacatcccagctgctgggaaacttcctgtacaac
gggcctccagaagatcgtccacctgggctcccggcatacgactggcgggatgtttacaac
accactacacaaatcctcaagcttctctccaaattccttggttgtttggacctgaataag
ttcgaggcaactgagactgaaggccatctagtgaataaagccctggaacatctgagtaac
aagacattttgggctggtattgtctttaaagacctccagccagactccagcagcatccca
ccctttgtcaagtacaaaatccgcatggacatcgatgaggttgagcgtaccaataaagtc
aaatcaaggtcatggactccaggagcaagagatcactcctttaatgagctgcgctacata
tggggaggctttgcctacctccaggacatgatggaccacgccattatacgactacaaaca
tcgaagactcaaccgcttggtgtctttgtccagcagatgccatacccttgctttgtggat
gatgtcttcatgcagagtatcggaaccgttcttcccatgttcctggttctggccttcatg
tactctgtgtgcatgatcatcaaaagtttggtgctggagaaggaacttcggctcaaggag
gttctgcgcgccgttggtgttcagaacagcgccctctggtccgccaggttcacagagaac
attgttctgctcatggttccctgtgcgctcatgagtgtcatggttaagtacggcaaagtc
ctccagtacagcgacccctcagtgatctttatcttcctgctggtgttctgcctggccacc
gtctcagagtgcttcttcattagtgtcttcttctccaaggccaacttagcagcatcgtgc
ggcggcctcatctactttctcctatacctgccgcacgtcctctgctatgcctggagggac
gtcatgggtttcggggccaaggtcgctgtgagtttactatcatgtgtggccttcggatac
ggctgtgagaaattctctaagtacgaagagcaaggcatcgggattcagtggcacaacatc
gccaaaagcccagaggagggggatcgctacaccttcatcatttccattgtcatgatgctg
tttgatgctcttctgtactgggtgctcacgtggtacattgaaaatgtctttccaggtcag
tatggaattcccaaaccatggaacttccctttcacttcctcttattggtgtgggacagca
tcagcgacagacaatcgtacagatttacttcaagattccagagtggaggacgtatatcta
gagaaaccaccttctaacagtaaagcaggggtctcgatccgcaaccttgtgaaaatctac
aagacgggtaagaagctggcagtggacggattgagcatggacttctatgagaatcagatc
acatcgtttctgggccacaacggagcaggaaaaaccactacaatgtctattctaacagga
ttattctcacctacatcgggaacagctctcgttaatggatacgacatccgcaccgacatg
gacgtaatacggaagtacctgggaatgtgtcctcagcataatgttctattcaatgagtta
actgtagaggagcacatttacttctacgcccggctgaaagggcgcagccacagggaggtt
gaatccgagatggaacagctaattaaagacgttggtttaccacataagcgtaaagacctc
gccaagaacctgtctggtggcatgcagagaaaactctcagtggctatagcgtttgtcggt
gggtcaaaaatcgtcatcttggatgaacctacagcaggagtagatccctacgctcgcagg
ggaatctgggacctgctgttaaagtacaaacaaggtcgaacaatcatcttgtcaacacac
cacatggacgaagcagacatcttgggggatcgcgttgccatcatctcccatggaaggatg
cgatgctgcggctcctcgctcttcctgaagaagagttttggcagcggctactatctcact
ctggtcagaagtggaacagagaagatgtctgctcaacggggcaatgtcacacaaacccag
gctaaggagacacaaccggagacagactgtccttgcagggacagtctggatgagggcatt
ggcagtcacacgtgggacaactcagatctgacagatttaacagctgtggctcagcttgtg
cggtgccacgtccctgaggctgtctttttggagagcatcggtcaggaaatcacgttcata
ctgccctacagtggagccagagacgggacttttgcagccctcttccaaaagctcgaccta
gccatggctgaccttggcctgaccagctacggtatctctgacaccacgctggaggagata
tttcttaaagtggctgaagacactggggtggatgcagaactaccagcaacacaggagcca
ttggtgagggactggaagagaagctcccgtgattccaggagaaacagcgtcgccaatgtc
tgctctaaaacggagcacttcaacaggaccagtgagttgaaggaaaagttttcaaggaaa
gtagaagattgtaagaaaagggccagcatcaatggaagaggatccgcggtcatcactggc
tggaaactgatcagaaggcagttcctggcgctcttcatcaagcgcttccaccacgcccga
aggagccgcaagggactcattgcccaggtggtcctgcctgcctttttcgtctgtctgtct
ctgatcttctccctcatcgtcccaccaatcggcagcttcccaagtctggagctgcagcca
tggatgtacgggctgcctcaaaacaccttctatagcaacgatatgcctgagaacatggag
gtttctagggtggtggacactttggtgaacaaccctggatttgggacgcggtgcatggac
ggagatccgatactaaagttaccatgttcctccagtgggtctgattggttcacccctccc
gtggatcagtcagtccttgacatcttcctcagtgggaactggagcatgtctaacccctcc
ccttcctgtcagtgctcctctcctgaaaggacgatcatgctacccgactgtccgcccggc
gcaggtggtctccctcccccacagagggtgcaaaatacaacagacactttgctgaatctg
actggtcgaaacgtgaccgacttcttggtcaagacttttgagcactttggcaaacaaagg
tatggagggatctctgttggaggaatcaactcacaagtccagctgacggagaaaggagtc
gaatacgtgatcaaggaattaaaaggcctattcaattcacctcaggataacgttaccgat
caggcgttccagagggccgagacgttgctgaagaagctgggaaacagggacaatgtcaag
gtgtggttttacaaccaagcatggcacagcatggtgtccttcctgagtgtggccaacaat
ggtatcttgagaggaaatctgcccgcgggtcaaagcccacgccagcatggcatctccgtc
tcgaaccaccccctcaacctcaccaaggaccagctctccttcacggccatggccacgacc
tctactgacgtggtggtgtccatctgcgttattttcgccatgtccttcattcctgccagc
tttgtcctctttctcatccaggagagggtgagcaaagccaagcatctgcaatttgtcagc
ggagtaaacccagctgtctactggctggccagctttgcctgggacatgtgtaactacatc
atcccctgcatcatagtgattgtgatcttcctagccttccaacaaaaagcttatgtctcg
cctcccaacctgcctgccttgattctcctgcttattttatatgggtgggccatcactcca
atgatgtatcctgcctccttcatcttcagcgtgcccagcacggcgtacgtggttctgacc
tgcatcaacctcttcattgggattaatggcagcgtggccacattcatcatggagctcttt
gacgatgagaatgttaagcacatcaacgacatagtgaagcaggtgctgctgatattccca
catttctgtctgggcagaggactgattgacatggcaaagaaccaggccatggcaacgctc
ttcatcagctttggggaagatcgttttaagaatccactaagctggggaatggtaggaaaa
aatctgtgtgctatgtccatccagggaattgtgatgttcaccctcacaatcctcatccag
tacaagttcttctgcaaaccaagacttatttcagtaacgccaccgtctgcagaggaagag
gatgttgatgttgcccgggaacgtaggcgagtgtatgaaggcggagctcaaaatgacctg
ctaaggacctatgacctcactaaggtataccctcagaagagcacccccgccgtggtcagg
ctatgtgtgggtgtgcctgctgcagagtgttttggcttgctgggtatcaacggagctggg
aaaaccacaacgttcaagatgctgacaggagacatcccagtctccagcggagaggccttt
ctaaacggatacagcatacgaacagagatgaggcatgttcaccagaacatgggttactgt
ccacaatttgatgccatcaacgaccttctgacaggacgagagcatctggagttttacgcc
cgcttgagaggggtaccagaaaacgaagttgccatggtggctgaatgggggattcagaag
ttgggactggtcaaatatgccaacaagtcagcaggaacgtatagtggtgggaacaaacgt
aagctctccacggcgatatctctgattgggagtcccccggtgattttcctggatgagccg
accaccgggatggaccccaaagcccggcgcttcctgtgggactgcatcctgagtgtcatc
aaagagggacgctcagtcatcctcacatcacacagcatggaggagtgtgaagccctctgc
actcggatggccatcatggtcaacggttgctttaagtgcctcgggagcatccagcacctg
aaaaacaggtttggcgacggctacacagtgatcgtgcgagtcggtggctttcctcctgcg
ctcaagccagtggaggacttcattgagcagactttccaaggcagtgttctcaaagagaaa
catcacaatactctccagtaccagcttccatacacaccaggagctctggccaacatcttc
agccaattcaccagccatcagcaaaggctgggtttggaggactactctgtgtcccagact
actctagatcaggtctttgtgaattttgccaagcaccagcacgaggaggatgagtctcat
gcctacggaaaccacgtggacatttcagacgagcttcccctgaggaccatgcaaaccact
aatgaagcgcagaaagtttaa
DBGET
integrated database retrieval system
